Protein

View in Explore
Genbank accession
YP_007011007.1 [GenBank]
Protein name
central tail fiber J
RBP type
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSGGGKASTPKLLDDNLKSKQFYRVLDLISEGPIAGPVDQEHMSSFMLNKTPITDASGNVNVNGISVAWRPGSETQQPINGFSAIEATTIVNTDVTHDTPLVRTITDQDVTRVRFNVGVTGLVEQDTKGNQNNTSVTMVLESRTGASGWVIEKTVTITGKISGQYLEAHLIDAPDIKPFDIRVRRITPDSSSDLLSNGTIWNSYSEITDDNLSYPFSAIAGAVIDRDQYTDTPSRTYHLRGLIVDVPDNYDPIARTYSGLWTGGFKKAWTNNPAWLFRELAKNTRFGLAKRAGYIDVDDGALYVLSQYCDQLVNDGYGGQEPRMTLNAYITEQASARDILDKIASMFRGIALWDGMRLSVMLDAPQDPIATITNSNVVDGEFKRSSVKRSEKYNAVVVSWTDPDNGWEQVKEYVSDDEMIARGNYNETTLEAFGCTSRGQAWRAGKWLLETAKRESSRLSFQMARDAIHFTPGDIVEIMDNNYAGARLGGRIMSHSGNKITVDAVESSLIAGGDTMSIMGSSGKFVKYVIDGVANNVVTLKTTPSWVRDGTVFAISTSNVSTRLFRILSVAETENNSVYSITASQHDPNKQAIVDEGAVFEIPNDTLNGYRVPNVENLRIINTNSETVQVMATWETATTTKKLVFELYVYSGDGKVVSQYETDQFRYEFYGLAAGSYTLGVRGRNENGMKGVETQISMIIGAPPAPSSIIWTPGLFSADLVPVMRITATTDTSFEFWYSGQNKITDPANIEDLAQFLGRSNQWTLHGLQADKTYYVYVRTRNAFGVSEFVEASGQASSDIPGMIDLIDEQIRESDAFKNVQEGVDINLEGVMSNALANHGKVEHQYQQYGEVRADILVVKTTVATAEQGLADLSTYVQAQIGPEGELTSAVNQKMTAEVNSDGTAKASYTLNMGIVRNGVKYNTGFGMSIEPSGNSYKSTVVFAAEQFGIYSGNNPGNWQAAFFVYNGQVFIRSALIQEASIDFAKITDSLQSANFIPGGGGRGWNLPKSGSPEFHGKLYADSGEFAFNGVNNVTRIDGNGITVNLSGGGRVVVGRWT
Physico‐chemical
properties
protein length:1059 AA
molecular weight: 115696,66990 Da
isoelectric point:4,96394
aromaticity:0,09160
hydropathy:-0,29292

Domains

Domains [InterPro]
IPR053171
1–880
IPR053171 IPR015406
IPR055385
87–211
IPR055385 IPR032876 IPR055383 IPR057587
IPR003961
613–691
IPR003961 IPR003961
IPR036116
617–792
IPR036116
IPR003961
726–794
IPR003961
YP_007011007.1
1 1059
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPN3UB
[NCBI] 		1147140 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium
[NCBI] 		90371 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007011007.1 [NCBI]
Genbank nucleotide accession
NC_019545.1 [NCBI]
CDS location
range 21678 -> 24857
strand +
CDS
ATGTCTTCAGGTGGTGGTAAAGCATCAACCCCAAAACTCCTCGACGATAACCTCAAATCAAAACAGTTTTACCGGGTTCTCGATCTGATATCGGAAGGTCCGATTGCAGGGCCTGTCGATCAGGAACACATGTCATCGTTTATGCTTAACAAGACACCAATCACGGATGCAAGCGGAAACGTTAATGTGAATGGAATTAGCGTAGCGTGGCGCCCCGGATCGGAAACTCAGCAGCCAATTAATGGCTTTTCTGCTATTGAAGCAACCACCATCGTAAACACAGATGTAACCCATGACACCCCTCTTGTTCGTACCATAACCGACCAGGACGTAACCCGGGTGCGGTTCAACGTAGGCGTTACCGGTCTGGTTGAGCAGGACACTAAAGGAAACCAGAACAACACTTCCGTCACCATGGTGCTTGAGAGTAGAACAGGTGCTTCAGGATGGGTCATTGAAAAGACAGTTACTATCACCGGTAAAATATCAGGCCAATATCTCGAGGCTCATCTGATCGACGCTCCAGATATTAAGCCGTTTGATATTCGTGTACGCCGCATTACGCCTGACAGCAGCAGCGATTTACTGTCCAACGGCACTATCTGGAATAGCTACAGTGAAATCACCGACGACAATCTGAGCTACCCATTTTCAGCCATCGCTGGCGCTGTTATCGACCGCGACCAGTACACTGACACTCCAAGCCGCACCTACCATCTTCGCGGACTGATTGTGGACGTTCCTGACAACTATGATCCGATTGCCAGAACTTACTCGGGGTTGTGGACTGGCGGATTCAAAAAAGCGTGGACTAACAACCCGGCGTGGCTGTTCCGTGAACTGGCCAAGAATACGCGTTTTGGCCTGGCGAAACGTGCCGGTTATATCGATGTAGATGACGGTGCGTTGTACGTCCTCTCACAATATTGCGATCAGCTTGTGAACGATGGCTATGGCGGGCAGGAACCAAGGATGACGCTGAATGCCTATATTACCGAGCAGGCGAGTGCGCGTGACATTCTCGACAAGATAGCGAGCATGTTTCGGGGTATAGCGCTGTGGGACGGGATGCGACTGTCTGTCATGCTGGACGCGCCACAGGATCCGATAGCGACAATCACGAATTCTAACGTGGTTGATGGCGAGTTCAAGCGTAGCTCCGTGAAGCGTTCAGAGAAATACAATGCCGTTGTTGTGTCCTGGACTGACCCTGATAACGGCTGGGAGCAGGTAAAAGAGTATGTTTCCGACGATGAGATGATTGCCCGCGGAAACTACAACGAAACCACTCTTGAGGCGTTTGGCTGTACCTCACGCGGTCAGGCATGGCGAGCAGGGAAATGGCTGCTGGAAACAGCAAAGCGTGAAAGCAGCAGACTGTCTTTCCAGATGGCGCGCGATGCTATCCACTTCACACCGGGTGACATAGTTGAAATCATGGACAACAACTATGCTGGCGCGCGGCTCGGCGGCAGAATTATGTCACATTCAGGCAATAAAATTACCGTTGATGCTGTCGAATCATCGCTTATAGCTGGCGGCGATACCATGTCTATCATGGGGAGCAGCGGTAAGTTCGTGAAGTACGTCATTGATGGCGTTGCTAACAACGTTGTAACCCTGAAGACGACTCCATCATGGGTGCGGGATGGAACAGTGTTTGCTATCTCTACCAGCAACGTTTCAACTCGGTTATTTCGTATCCTCAGCGTCGCAGAGACAGAAAACAATTCCGTATACAGTATTACTGCATCACAGCATGATCCGAATAAACAGGCCATTGTGGATGAAGGCGCAGTGTTCGAAATTCCTAACGACACGCTTAATGGCTACCGCGTTCCGAACGTTGAAAACCTGCGGATTATTAACACCAATTCGGAAACGGTACAGGTTATGGCGACATGGGAAACAGCTACGACGACCAAAAAGCTTGTTTTCGAACTTTATGTCTACTCGGGTGATGGGAAAGTGGTTTCTCAGTACGAAACAGACCAGTTCCGGTATGAGTTTTATGGGCTGGCCGCCGGTAGCTACACGCTGGGTGTTCGTGGCCGCAATGAAAACGGGATGAAAGGTGTTGAAACGCAGATCAGTATGATTATCGGTGCGCCACCTGCACCATCCAGCATTATCTGGACGCCCGGCCTGTTTTCTGCTGACCTGGTGCCAGTCATGCGTATCACCGCCACCACAGATACTTCTTTCGAATTCTGGTACTCAGGGCAAAACAAGATTACCGATCCGGCTAATATCGAAGACCTGGCGCAGTTTTTGGGGCGCTCAAACCAGTGGACACTCCACGGCCTGCAGGCAGATAAGACATATTACGTTTATGTGCGCACCAGGAATGCTTTTGGTGTGTCTGAGTTTGTTGAGGCGTCAGGTCAGGCGTCATCCGATATTCCAGGTATGATAGATCTCATTGATGAGCAGATACGCGAGTCAGACGCGTTCAAAAATGTTCAGGAAGGTGTCGACATTAACCTGGAAGGCGTCATGTCGAACGCACTGGCTAATCACGGTAAGGTTGAACATCAGTACCAGCAGTATGGGGAGGTTCGCGCCGACATCCTTGTTGTGAAAACAACTGTCGCTACTGCCGAGCAGGGGCTCGCCGATCTTTCCACTTACGTACAGGCACAAATAGGCCCTGAAGGAGAGTTAACCTCAGCCGTAAATCAGAAAATGACCGCTGAGGTAAATAGTGATGGGACTGCAAAAGCCTCTTACACACTCAATATGGGGATTGTCAGGAACGGTGTGAAATATAACACCGGATTCGGCATGTCTATCGAGCCATCGGGGAATAGCTATAAATCTACCGTTGTATTTGCCGCGGAACAGTTCGGCATTTATTCCGGTAATAACCCCGGCAACTGGCAGGCTGCATTCTTCGTCTATAACGGACAGGTATTTATTCGTAGCGCATTAATTCAGGAAGCATCCATCGATTTTGCGAAAATTACCGATTCACTTCAGTCTGCAAACTTTATCCCCGGTGGTGGTGGACGCGGATGGAATTTACCAAAATCTGGTAGCCCAGAATTCCATGGGAAACTCTATGCCGACAGCGGTGAATTTGCATTTAACGGAGTGAATAACGTTACTCGCATTGACGGCAATGGGATCACAGTAAATCTCTCAGGAGGTGGTCGTGTTGTTGTTGGACGATGGACATAA

Tertiary structure

PDB ID
271a01a4eb7bba8d90da4205ac770e619d49a6cd5eac27685dbc0d33df8f4b0f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8070
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50