Phage RBP Database

Genbank accession

AOV59252.1 [GenBank]

Protein name

short tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,73

TF

Evidence RBPdetect2

Probability 0,68

Seq2Symm

C3 confidence 0,732

C3	0,732
C1	0,205
C2	0,006

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MKGAVIGTIMPWSGPVSNIPKGWIICDGTQPPANEYPLLVQAIGDTYNSGTTNLGGGFPAYTGNFTLPDLVGGKMLMDIEQSYFGSLTADRDNDPDAGNLISPYIGQNTDNGVNAAWNNVYTDVVFTLNERTGYSGNVRGNSIIDGEGEKSIFIGGRKLGHTHIRAHGHSGIYETVSGGLGSSGTATNRRPGLGVIPYDNITATFNYAAIDEAPTVFGSRFDDGVVDSVRLGHEGFTKGNVELAGSGNWGSFGSFSGFGSGDPGRTVMRVSGENPPINLSPQRVTQTSLAQSVNYDYPVLGGNGANSVPFASGGGNTNIPSGFTNYYEDTPAAGNYGTLLSNPGSSFVTDTGGGAQANVDAHDHEPITVLFDQNSLKPQSTLVADVNIPATTNLDNASNVAALQISMNTSQPSMTCIYIIRAY

Physico‐chemical properties

protein length:	423 AA
molecular weight:	44206,03240 Da
isoelectric point:	4,61552
aromaticity:	0,08747
hydropathy:	-0,26643

Domain architecture

AOV59252.1

1 423 aa

ATT 1–80 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR037053
ATT

IPR037053

IPR037053
ATT

IPR037053

SSF88874
STR

SSF88874

IPR011083
ATT

IPR011083

AOV59252.1

1423 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0344
STR

DC_0344

AOV59252.1

1423 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR037053	ATT	IPR037053	1	70	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR037053	ATT	IPR037053	1	80	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	4	65	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	7	65	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits

Proteins with similar domain architecture

Phage

Synechococcus phage S-CAM4 [NCBI] · taxon 1883367

Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Potamoivirus Potamoivirus cam4

Host

Synechococcus sp. [NCBI] · taxon 1131

Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp.

Genbank protein accession

AOV59252.1 [NCBI]

Genbank nucleotide accession

KU686200.1 [NCBI]

CDS location

range 30531 -> 31802
strand +

CDS

ATGAAAGGTGCCGTTATTGGCACCATCATGCCATGGTCTGGACCTGTCAGTAATATACCAAAAGGTTGGATTATTTGTGATGGAACTCAACCACCAGCAAATGAGTATCCTTTACTTGTGCAAGCAATTGGGGATACTTATAATTCTGGAACGACTAATTTAGGAGGAGGATTTCCAGCATATACTGGCAATTTTACACTACCCGATTTAGTTGGTGGTAAAATGTTGATGGACATTGAACAATCTTATTTTGGATCATTAACTGCTGACAGAGATAATGATCCTGATGCTGGTAATTTAATTTCTCCATATATTGGACAAAATACTGATAATGGAGTCAACGCTGCTTGGAATAATGTATATACTGATGTAGTTTTCACATTAAATGAGAGAACTGGATATTCTGGAAATGTTAGAGGTAATAGTATTATAGATGGTGAAGGGGAAAAATCTATATTTATTGGTGGTAGAAAATTAGGACATACTCACATTAGAGCACATGGTCACAGTGGAATTTATGAAACTGTATCTGGAGGTCTAGGTAGTTCTGGAACAGCAACAAATCGAAGACCTGGATTAGGTGTTATACCTTATGATAATATAACGGCAACATTTAATTATGCTGCCATTGATGAAGCGCCAACAGTTTTTGGTAGTAGATTTGATGATGGTGTTGTTGACTCTGTTCGACTTGGACACGAAGGATTTACAAAAGGTAATGTTGAGTTAGCTGGATCTGGCAACTGGGGATCTTTTGGTAGTTTTAGTGGATTTGGTAGTGGAGACCCAGGAAGAACTGTTATGAGAGTTAGTGGTGAAAATCCACCTATTAACTTATCACCACAAAGAGTTACTCAAACTTCTCTTGCTCAATCTGTGAATTATGATTATCCTGTTTTAGGTGGAAATGGAGCTAATTCGGTTCCTTTTGCTTCTGGTGGTGGTAATACTAATATTCCTTCAGGATTTACTAATTATTACGAAGATACGCCAGCTGCTGGAAACTATGGCACATTACTAAGTAATCCTGGATCTAGTTTTGTTACTGATACCGGTGGTGGAGCACAAGCAAACGTTGATGCTCATGATCACGAACCAATTACAGTTTTGTTTGATCAAAATAGTTTAAAACCACAGTCCACATTGGTTGCTGATGTTAATATTCCCGCCACTACTAATCTTGATAATGCTTCAAATGTTGCAGCACTACAGATTAGTATGAACACTAGTCAACCGTCTATGACATGTATATACATCATCCGAGCATACTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)