Protein

View in Explore
Genbank accession
QPX47967.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,50
Protein sequence
MTIITPTGITGITSITSTGNTLQFTSASGGNLDVNGLSVTSGSNINVSGIVTASGFVGNITGNINSTGVSTVTTLRSTSIVGVSSIGVTTSYVTSINDGPISGARNRIINGAMEIAQRGISATYAGTSQNQSTYNTIDRFAFASYGSYPAGTYATVAQIADAPVGFSSCLRVTANQTLTVGSSNARGVWVTQAIEGYNFVDLWNKPITVSFWVKTSNVGTYSLAFSGTGSTAGYATSYTVNSANTWEYKSVTLTHSTSLYTPDRSNGVALTLVFGLLGDATWIGTATANQWVSANVPYLHGCKNLFDTLNATWQITGVQLEAGTVATPFERRSYGQELALCYRYYRKYSSSGSTYTSFGSGLTGGSSSINRWGFSLDIPMRTTPTVAFTNCVGWNGPIGGAISVAGSYTTNNNIDLDLNTSGLNTTVGFIAKVLLLSNGYAELTGAEL
Physico‐chemical
properties
protein length:448 AA
molecular weight: 46765,31880 Da
isoelectric point:7,59604
aromaticity:0,10045
hydropathy:0,06964

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPX47967.1
1 448
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6315
Central domain 11 207 198 0,3200
C-terminal 208 448 240 0,8995
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-207
C-terminal
208-448

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SRM01
[NCBI] 		2781608 Uroviricota > Caudoviricetes > Pantevenvirales > Serangoonvirus > Serangoonvirus essarone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPX47967.1 [NCBI]
Genbank nucleotide accession
MW015081.1 [NCBI]
CDS location
range 1480 -> 2826
strand +
CDS
ATGACGATTATTACACCTACTGGTATTACGGGTATTACAAGTATTACCTCCACTGGAAATACTCTACAGTTTACAAGTGCTTCTGGTGGCAATTTAGATGTTAATGGTTTAAGTGTTACGAGTGGTTCAAATATTAATGTCAGTGGTATTGTAACTGCTTCAGGTTTTGTTGGTAATATAACAGGAAATATAAACTCAACGGGTGTTTCTACTGTTACGACTTTAAGATCTACAAGTATTGTAGGTGTTAGTAGTATTGGAGTTACTACATCTTATGTAACTTCTATTAATGATGGTCCTATTTCTGGTGCCCGGAACCGGATAATCAATGGGGCAATGGAGATTGCACAAAGGGGAATAAGTGCAACTTATGCAGGAACATCGCAAAATCAATCAACTTACAATACTATAGATAGATTTGCTTTTGCTTCTTATGGATCATATCCAGCAGGAACTTATGCAACAGTTGCACAAATTGCCGATGCTCCTGTTGGATTTTCAAGTTGTTTAAGAGTAACTGCCAACCAAACTTTAACCGTTGGATCTTCAAATGCTCGTGGAGTTTGGGTAACACAAGCAATAGAGGGATATAATTTTGTAGATCTTTGGAATAAACCAATTACAGTTTCTTTTTGGGTTAAAACTAGTAATGTTGGAACTTATTCATTAGCATTTTCTGGAACAGGATCTACCGCTGGATATGCAACTTCTTATACTGTAAATTCTGCAAATACTTGGGAATATAAATCTGTTACACTTACACACAGTACTTCATTATACACTCCCGATAGAAGTAATGGAGTTGCATTAACTTTAGTATTTGGTCTTTTGGGAGATGCGACTTGGATTGGAACTGCGACAGCAAATCAATGGGTAAGTGCTAATGTTCCATATCTTCACGGATGTAAAAACTTATTTGATACATTAAATGCTACTTGGCAAATCACAGGAGTCCAACTAGAAGCAGGAACAGTCGCTACTCCTTTCGAAAGAAGATCTTATGGACAAGAGTTAGCATTGTGTTATAGATATTATCGCAAATATTCATCAAGTGGATCAACTTATACTTCTTTTGGTTCTGGACTTACCGGTGGATCATCTTCCATAAATCGATGGGGATTTTCTTTAGATATTCCAATGAGAACCACTCCCACAGTTGCCTTTACAAATTGTGTTGGGTGGAATGGTCCAATTGGTGGAGCTATTTCAGTTGCAGGATCATATACAACAAATAATAATATAGACCTTGATCTTAATACAAGTGGATTAAATACTACTGTGGGATTTATTGCAAAGGTATTATTACTTTCAAATGGATATGCTGAACTTACAGGAGCAGAACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a9dc78917a1e02139c15eeb244f512d1642d96282f197bc451b072e5190d193
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7816
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50