Protein

View in Explore
Genbank accession
AGH56784.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MYSTPTQNTAYIGIATNKDTEVPSIDKADYSWSRFKGEDGSSNINLGFIFTSNIVLDSSQNKVTRLSGSGWDAQVYSSLSYLGGCSVQSSPTTKMSSFMFGLSDNPTSSISFDHIDYAILLRSNGSKAIYESGSAVGEFGTYEIGDKFNIEYDNQTIKYYQNGNLLRTLSTTENRTFHFGSSFGTSAQNITEYITFIPIGAKGSDGTNGTNGTNGAKGDKGDIGPTGPSGISGPSIVYRGLFANGTTYYNNTQRRDVVKYGSVFYIYKGTNGANNTSWSSSNWENFGVQFESVATNLLLAESANIADWIISNGKITSQNQSTGRANAVLNGVDGRITFNGRTYVLASSGSGGTTVDSFTVIDNEGLLIERASGSSQQASNVQIKPDQININAAAPLDASSYGSPRVAIYSSVNVNSNNIGTGINFVAAVLGKVNNTSSSPAPSYGGYFEGLYAEGVHVRSRSITSTTYLDDMDYYVDCVNSSDITVYLPSSPNNGRIVRICRGRDDVLVNGNGKTIKFRNDNLSTINVSYDGNTAELIYVQSGNYWRYSELSRKF
Physico‐chemical
properties
protein length:555 AA
molecular weight: 59741,66640 Da
isoelectric point:5,32066
aromaticity:0,10811
hydropathy:-0,37586

Domains

View on InterPro

No domain architecture available.

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AGH56784.1
1 555 aa
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,9854
Central domain 48 462 416 0,4985
C-terminal 463 555 92 0,8144
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Cellulophaga phage phiST [NCBI] · taxon 756282
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Cellulophaga baltica [NCBI] · taxon 76594
cellular organisms Bacteria Pseudomonadati FCB group Bacteroidota/Chlorobiota group Bacteroidota
Host
Cellulophaga sp. MM#3 [NCBI] · taxon 192170
Bacteria Bacteroidetes Flavobacteriia Flavobacteriales Flavobacteriaceae Cellulophaga

Coding sequence (CDS)

Genbank protein accession
AGH56784.1 [NCBI]
Genbank nucleotide accession
HQ634192 [NCBI]
CDS location
range 67400 -> 69067
strand -
CDS
TTGTATTCAACGCCTACTCAAAATACAGCATATATTGGAATAGCTACAAATAAAGATACTGAAGTTCCAAGTATAGACAAAGCAGATTATTCTTGGAGTAGATTTAAAGGTGAAGATGGAAGCTCAAATATAAATTTAGGATTTATTTTCACTAGTAATATTGTACTAGATTCGAGCCAAAACAAGGTAACTAGATTATCTGGTTCAGGATGGGATGCTCAAGTTTACTCATCATTAAGTTATTTGGGTGGATGTAGTGTTCAATCTTCACCAACAACCAAAATGTCATCTTTTATGTTTGGACTTAGTGATAATCCAACGAGCTCAATATCTTTTGATCATATTGATTATGCTATTTTGTTGAGAAGTAATGGTTCGAAAGCTATATACGAAAGTGGTTCAGCGGTTGGTGAATTTGGAACTTATGAAATTGGTGATAAATTCAATATAGAGTACGATAATCAAACTATAAAATACTATCAAAATGGTAATTTATTAAGAACATTATCTACAACAGAAAATAGAACATTTCATTTCGGAAGTTCATTCGGAACAAGTGCACAAAACATTACTGAATACATAACATTTATTCCAATTGGAGCAAAAGGTTCTGATGGAACTAATGGAACGAATGGAACGAATGGAGCAAAAGGCGATAAAGGTGATATTGGACCAACTGGACCAAGTGGTATTTCTGGACCTTCTATAGTTTATAGAGGTTTGTTTGCAAATGGAACAACTTATTATAATAATACACAACGAAGAGATGTTGTAAAATATGGAAGCGTATTTTATATTTATAAAGGAACTAATGGTGCAAATAATACATCTTGGTCAAGCTCTAATTGGGAAAATTTTGGAGTTCAATTTGAATCAGTTGCGACAAATCTATTATTAGCAGAAAGTGCAAATATAGCAGATTGGATTATTTCAAATGGCAAAATAACTAGTCAAAATCAATCAACTGGTAGAGCGAATGCTGTATTAAATGGAGTTGATGGAAGAATTACTTTCAATGGAAGAACTTATGTTTTAGCTTCAAGTGGTTCAGGTGGCACAACTGTAGATAGTTTTACAGTAATAGATAATGAAGGGTTACTCATAGAGAGAGCATCAGGATCTAGTCAACAAGCATCGAACGTTCAAATAAAACCAGATCAAATTAATATAAATGCAGCCGCTCCATTAGATGCATCTTCATATGGATCACCAAGAGTTGCTATTTATTCGAGCGTAAACGTTAATTCAAATAATATCGGAACAGGTATTAATTTCGTTGCAGCCGTTTTAGGTAAAGTTAACAATACATCTTCTAGCCCAGCACCTTCTTATGGAGGTTATTTTGAAGGCTTATATGCTGAAGGTGTGCATGTTAGATCAAGATCTATAACGTCAACAACTTATTTAGATGATATGGATTATTATGTTGATTGTGTCAATTCATCAGATATTACAGTATACTTACCTTCTAGTCCTAATAATGGACGAATAGTTCGTATATGTAGAGGTCGCGATGATGTTTTAGTAAATGGTAACGGAAAGACTATAAAATTTAGAAATGATAATTTAAGTACTATAAATGTCTCTTATGATGGTAATACAGCAGAATTGATATATGTTCAATCTGGAAATTACTGGAGATATTCTGAATTATCTAGAAAATTTTAA

Genome Context

Tertiary structure

AGH56784.1
ESMFold structure
Source ESMFold
pLDDT 72.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Genome Sequence of Cellulophaga phage phiST Henn,M.R., Reimann,L., Holmfelt,K., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank