Protein

View in Explore
UniProt accession
S4X3C0 [UniProt]
Protein name
Tailspike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTGCGDVLSLNDLQVAKKHHIFEAEVITGKQGGVAGGADIDYATNQVTRQTQKTLPAVLRDAGFSPASFNFTTGGTLGINDADKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPITTGGISDSAWVAFGDITFREEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGTLVFTQLGEGSVVVGVYMESATTPWVIKPWTDNNEWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIKSLLPSEAKDQNISSVLEIRECTGVEIHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSVQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTPRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPYSQYPVHMLPLNHLIDNLFVRGSLGVGFGMDGKGLYVSNITVEDCAGSGAYILAHETVFTNIAIIDTNTKNYPGNQIYISGACRVNGLRLVGIRPTSEQGMTIDAPNSTVSGITGLVDPSRINVANLTEEGLGNSRINSFNNDSAALRFRIHKLSKTLDSGAVYSHINGGPGSGSAWTEITAIAGSLPDAVSMKINRGDYRAVEIPVAVTVLPDAAVRDNGSIAMYLEGDNLKALVKRADGSYVRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 73241,11410 Da
isoelectric point:5,08546
aromaticity:0,08918
hydropathy:-0,18787

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
71–132
IPR040775 IPR011050
IPR015331
RBD
138–684
IPR015331
S4X3C0
1 684
Architecture
ATT
STR
ATT 65-135 | STR 136-684
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
S4X3C0
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9927
Central domain 156 600 446 0,9877
C-terminal 601 684 83 0,7957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-600
C-terminal
601-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Jersey
[NCBI] 		1340534 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus jersey
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGP24921.1 [NCBI]
Genbank nucleotide accession
KF148055 [NCBI]
CDS location
range 24108 -> 26162
strand +
CDS
ATGTCTACTGGTTGCGGTGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCATATTTTCGAAGCCGAGGTAATCACCGGCAAACAGGGTGGTGTAGCTGGCGGCGCAGATATCGACTACGCCACTAACCAGGTAACCAGGCAGACGCAGAAGACCCTGCCCGCGGTTTTACGCGATGCTGGTTTCTCCCCGGCGTCTTTTAATTTTACGACCGGCGGAACCCTGGGGATTAACGACGCCGATAAAGCTGTTCTTTGGCCGAAAGAAGATGGTGGGGATGGAAACTATTACGCATGGCGCGGCTCCCTGCCAAAAGTTATCCCTGCGGCGTCGACACCTATTACGACAGGCGGCATTTCAGATTCCGCTTGGGTTGCGTTCGGAGATATTACCTTTCGCGAAGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCCGTTGATAGTGTTCTTATTGACCGTGACTACAATTTCAGCAATAACGAAACCGTTAATTTTGGCGGTAAGACCTTAACCATCGACTGTAAAGCGAAATTTATTGGCGACGGTACCCTTGTTTTCACACAACTAGGTGAAGGGTCTGTTGTAGTTGGTGTTTATATGGAGAGTGCCACGACGCCGTGGGTGATTAAACCCTGGACCGACAATAATGAGTGGATAACTGACCCCGCTGCGATTGTAGCAACACTGAAACAGTCTAAAACAGATGGGTACCAGCCAACGGTAAACGATTATGCCAAGTTTCCGGGTATAAAATCACTTCTCCCATCGGAAGCTAAAGACCAAAACATCTCGTCTGTCCTTGAGATACGGGAATGCACGGGCGTTGAGATTCATCGGGCTAGCGGTCTTATGGCGTGCTTCCTGTTCCGCGGGTGCCATTTCTGTAAGATGGTAGACGCCGACAACCCGAGCGGCGGGAAGGACGGCGTAATTACCTTTGAAAACCTGAGCGGCGATTGGGGTAAGGGTAACTATGTCATTGGTGGTCGAACCAGTTATGGGTCAGTAAGCAGCGTCCAGTTTTTACGTAATAATGGTGGATTCGAACGCGACGGCGGGGTTATTGGGTTTACTTCATACCGTGCGGGTGAAAGCGGTGTTAAGACGTGGCAAGGTACAGTAGGTTCTACAACTCCCCGTAACTACAACCTACAATTCCGTGATTCCGCGGTTTTGTACCCGGTATGGGATGGCTTCGATTTAGGTGCGGATACCGATATGAACCCGGAAGATGACCGCCCGGGGGATTTCCCATATTCTCAATACCCGGTACATATGCTCCCCCTAAACCATTTGATAGACAATCTATTTGTTAGAGGTTCGCTGGGTGTAGGTTTCGGTATGGACGGGAAAGGTCTGTATGTCTCTAATATAACCGTCGAGGATTGCGCTGGTTCTGGGGCCTATATTCTTGCCCACGAAACGGTATTCACTAATATAGCAATAATCGATACCAATACCAAGAATTACCCCGGGAACCAGATATACATCTCAGGCGCATGCCGTGTGAACGGTTTACGTTTGGTCGGCATCCGGCCCACCAGCGAACAGGGTATGACGATAGACGCGCCTAACTCCACTGTAAGCGGAATAACGGGCCTCGTAGACCCCTCAAGGATTAACGTAGCCAATTTGACGGAGGAAGGTCTTGGTAACTCTCGCATAAACAGTTTCAATAATGATTCTGCGGCGCTTCGGTTTCGTATTCATAAACTGTCAAAAACCCTTGATAGCGGGGCCGTGTACTCCCACATAAACGGCGGGCCAGGTTCTGGTTCAGCATGGACCGAAATTACCGCTATTGCGGGGAGCTTGCCCGATGCCGTGTCGATGAAAATCAATAGAGGCGATTATCGTGCTGTTGAGATACCTGTAGCTGTAACCGTTTTACCTGATGCTGCGGTTCGAGATAACGGGTCGATCGCCATGTATCTGGAAGGTGATAACCTTAAGGCGTTAGTTAAGCGGGCCGACGGAAGCTATGTAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
c7cefc06752b054ce70c3578ca4955e6afcd5b8362035b4919895ee07d530766
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6737
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50