Protein

View in Explore
Genbank accession
QXV84822.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTIFTKDDTGNIIDLGIAKGGQIDGNVTIDGTLRVNGPINNFGNFSTSGTITASNIVSATVFRSTSGSFYTRAINDTANAHLWFENTNGSERGVLYSKPQSENEGVITMRVRQGTAAGAQNSEFHFISTDGGIFQARKLTALTSISTPTISVNLINHDSKSFGQYDSQSLVNYVYPGTGETNGVNYLRKVRAKSGGTIYHEIVTAQTGLADEVSWWTGNTPLFKLYGIRNDGRMIIRNSLAIGTVTQGFPSSDYGNVGALGNIFLALGDNGTGLVYRKTGVFDFVGSGLSLASITPDSFRSTRKAIFGRSEDQGTTWIMPGTNAAFLSVQTQADTNTAGDGQTHIGYNSGGKMNHYFRGKGKTNINTQEGMEVNPGILKLVTGSNNVMFYADGGITSVKQLSIYNGIYLAANNSTAGLTFAPTTTVDGTKQILWEGGTRAGQNKSYVTVKAWGNSFNASGDRSRETVFEVSDGQGYHFYSQRVAPGSGSTVGPIQFRVNGGLLTSGSIVASGSITTESSLNVNNGLSVNGQAKFGGTANALRIWNAEYGAIFRRSESNFYIIPTNQNEGESGDIHSSLRPVRIGLSDGMVGLGRDSFIVDQNNALTTINSNSRINANFRMQLGKSTYIDAECTDAVRPAGAGSFASQNNENVRAPFYMNINRTDTSTYVPIVKQRYVQNNSCYSIGTLINGGNFRVHYHEGGDGGSTGAIIKDLGWEFNKNGDFYSPGKLGAGNIRIGTDGNITGGSGNFANLNTTLNRKVNSGFVTYGATAGWYKFATVTMPQSTSTVSFTITGGKGFNTGLFTQCAITEIVLRTGNDRPAGLNAVMYTRTAAGLTDIAVVNTSGNTYDIYVESGTYANQLAYTWHTVDNATVEVIGAFGPTQNPVDSLPVDYVKGQVANMLNNLVDTGKVKRYVAESEIAINNPTGIRITSNSDRSGSNSVLFRNDGGSFYILLTDKNSSDGDNKATEGDWNGKRPFSIDMTAGTVRLGENTSFGKDVTIDGSINSRVKVVGQWNVSFSDISDVTRDRSAFLVNTGGISKTSQSYYPLFSGYSFLTDAGYRQSFEFGWLGVSGTWRQGIIRMRGDNPSGQQARWTFDMDGTFYAPILSCGSARAFGVNASNGLGGNSITFGDSDTGIKQNGDGLLDIYANSVQVFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFKPIENALDKVEKLNGVIYDKAEYIGGEAIETEAGIIAQTLQDVLPEAVRETEDSKGNKILTVSSQAQIALLVEAVKTLSSRVKELESKLM
Physico‐chemical
properties
protein length:1312 AA
molecular weight: 140728,47610 Da
isoelectric point:8,20413
aromaticity:0,09375
hydropathy:-0,30473

Domains

Domains [InterPro]
DC_1954
STR
1–1311
DC_1954
IPR048390
ATT
487–618
IPR048390 IPR030392 Coil
IPR030392
CHP
1214–1311
IPR030392
QXV84822.1
1 1312
Architecture
STR
ATT
STR
STR 1-486 | ATT 487-618 | STR 619-1311 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV84822.1
1 1312
Domain Start End Length (AA) Confidence
N-terminal 1 742 742 0,0460
Central domain 743 981 240 0,8102
C-terminal 982 1312 330 0,7623
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-742
Central
743-981
C-terminal
982-1312

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage TadeuszReichstein
[NCBI] 		2852015 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV84822.1 [NCBI]
Genbank nucleotide accession
MZ501106 [NCBI]
CDS location
range 61783 -> 65721
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACCGCAGGTGCACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGATAGAACAATTTTTACTAAAGATGATACAGGAAATATCATTGATCTAGGTATTGCTAAAGGCGGTCAAATTGATGGAAATGTAACTATTGATGGAACTTTACGCGTCAATGGACCAATAAACAACTTTGGAAATTTTTCTACAAGTGGTACTATTACGGCAAGTAATATTGTTTCTGCTACAGTATTCAGATCAACATCTGGTTCATTTTATACAAGAGCAATAAATGATACTGCAAATGCCCATCTTTGGTTTGAAAATACAAATGGCTCAGAACGTGGCGTTTTATATTCAAAACCGCAGTCTGAAAATGAAGGCGTAATTACAATGCGTGTTCGTCAAGGAACCGCTGCGGGAGCTCAAAATTCAGAATTTCATTTCATTTCTACTGATGGCGGTATCTTCCAGGCACGCAAGCTAACTGCTTTAACTTCTATTAGTACACCAACTATTAGTGTTAATTTAATTAATCATGATTCTAAATCATTTGGACAATACGATTCACAGTCTTTGGTTAACTATGTTTATCCTGGAACCGGTGAAACAAATGGTGTAAACTATCTTCGTAAAGTTCGCGCTAAGTCCGGTGGTACAATTTATCATGAAATTGTTACTGCCCAAACAGGCCTGGCTGATGAAGTTTCTTGGTGGACTGGTAATACACCATTATTTAAACTATACGGTATTCGTAACGACGGCAGAATGATTATCCGCAATAGCTTGGCCATTGGTACTGTGACGCAAGGGTTTCCGTCAAGCGATTATGGCAATGTTGGGGCACTAGGAAATATATTTCTTGCTTTAGGTGATAATGGAACTGGTCTAGTTTATAGAAAAACCGGGGTATTTGATTTCGTTGGTTCTGGTTTATCTTTGGCATCTATTACTCCTGATAGTTTCCGTAGTACCCGTAAAGCGATTTTTGGTCGTTCCGAGGACCAAGGTACAACATGGATTATGCCTGGAACGAACGCTGCATTTTTATCAGTTCAAACACAAGCTGATACTAACACTGCTGGCGACGGCCAGACGCATATTGGCTATAACTCAGGCGGAAAAATGAACCACTATTTCCGTGGTAAAGGCAAAACTAATATTAATACCCAAGAAGGCATGGAAGTTAACCCGGGTATTCTTAAACTAGTGACTGGCTCTAATAATGTAATGTTTTATGCTGATGGCGGTATTACATCTGTTAAGCAGCTTTCAATATATAACGGCATATATTTAGCAGCTAATAATTCTACTGCTGGGCTAACATTCGCTCCAACTACTACAGTTGATGGCACTAAGCAAATTTTGTGGGAAGGTGGTACTCGTGCTGGGCAGAATAAAAGCTATGTAACTGTTAAAGCATGGGGTAATTCATTTAACGCATCTGGCGATCGTTCCCGTGAAACGGTTTTTGAAGTATCAGATGGGCAAGGTTACCATTTTTATTCTCAGCGAGTTGCTCCCGGATCAGGTTCTACTGTCGGACCTATTCAATTTCGAGTTAATGGTGGTTTATTAACTTCAGGTAGTATTGTTGCTTCTGGTTCTATTACAACTGAATCTTCTTTAAATGTTAATAATGGATTGTCTGTAAATGGACAAGCTAAATTTGGTGGAACAGCAAACGCATTGAGAATTTGGAACGCCGAATATGGCGCTATTTTCCGTCGTTCAGAAAGTAATTTTTATATTATTCCAACCAATCAAAATGAAGGCGAAAGTGGAGACATTCACAGCTCTTTAAGACCTGTGAGAATAGGATTAAGCGATGGCATGGTTGGGTTAGGAAGAGATTCTTTTATAGTAGATCAAAATAATGCTTTAACTACTATAAACAGTAACTCTCGCATTAATGCCAACTTTAGAATGCAATTGGGGAAGTCGACATATATTGATGCAGAATGCACTGATGCCGTTAGACCCGCAGGGGCTGGTTCATTTGCTTCGCAAAATAATGAAAACGTCCGTGCTCCGTTCTATATGAATATTAATCGCACAGATACAAGTACTTACGTTCCAATTGTTAAACAGAGATACGTACAAAATAATAGTTGCTATTCTATTGGTACTTTAATTAATGGCGGTAATTTTAGAGTTCATTATCATGAAGGTGGTGATGGCGGTTCTACTGGCGCGATTATAAAGGATTTAGGTTGGGAATTTAATAAAAATGGTGATTTTTACTCTCCTGGTAAATTAGGTGCTGGAAATATTCGTATCGGAACAGACGGTAATATCACGGGTGGTTCTGGTAATTTTGCTAACTTGAATACCACATTAAACCGTAAGGTCAATTCCGGATTTGTAACATACGGTGCAACTGCTGGATGGTATAAATTCGCTACAGTAACGATGCCACAATCTACTTCTACTGTTTCATTTACTATAACTGGTGGTAAAGGATTTAATACCGGACTGTTTACACAGTGTGCTATAACAGAAATTGTTCTTCGTACTGGCAATGACCGCCCAGCAGGTTTAAACGCCGTGATGTATACCAGAACAGCTGCAGGTCTTACTGATATTGCTGTAGTTAATACCTCAGGAAATACATATGATATCTATGTTGAATCGGGTACTTATGCCAACCAATTAGCTTATACTTGGCATACAGTTGATAATGCTACCGTAGAAGTTATCGGCGCTTTTGGTCCTACTCAAAACCCAGTAGATTCTTTGCCGGTTGATTATGTTAAAGGTCAAGTAGCTAACATGCTTAACAACCTGGTAGACACTGGTAAAGTAAAACGCTATGTAGCAGAGTCGGAAATTGCTATTAATAACCCAACTGGTATTCGTATTACGAGTAATTCTGATAGATCAGGTTCTAATTCCGTTTTATTTCGAAATGACGGTGGAAGCTTCTATATTTTACTGACCGACAAAAACTCTTCAGACGGCGATAATAAAGCAACTGAAGGTGATTGGAATGGAAAACGACCATTTTCAATTGATATGACTGCTGGTACTGTTCGTCTTGGCGAAAATACTTCTTTTGGTAAAGATGTTACTATTGATGGAAGCATTAATTCACGAGTTAAAGTTGTCGGACAGTGGAATGTTAGCTTTTCTGATATTTCAGATGTGACTCGTGACCGTTCTGCATTTTTAGTGAATACGGGTGGCATTTCCAAGACAAGTCAATCTTATTACCCGCTATTTTCTGGATACAGTTTTTTAACTGACGCAGGTTATCGACAATCGTTTGAATTTGGATGGTTAGGTGTTTCTGGTACTTGGCGTCAAGGCATTATTCGCATGCGTGGTGACAACCCATCGGGGCAACAGGCTCGTTGGACTTTTGATATGGACGGAACATTTTATGCTCCTATACTATCATGCGGATCTGCGAGAGCATTCGGTGTCAATGCATCAAATGGTCTCGGTGGAAACAGTATAACATTTGGTGATAGCGATACTGGTATTAAGCAAAATGGCGATGGATTATTAGACATATATGCGAACAGCGTACAAGTGTTCCGTTTCCAAAACGGTGATTTGTACTCATACAAAAATATAAATGCTCCAAACGTTTATATTCGTTCTGATATTCGTTTAAAATCCAACTTCAAACCTATCGAAAATGCACTTGATAAAGTTGAAAAACTTAACGGTGTCATTTACGATAAAGCTGAATACATCGGTGGAGAGGCAATTGAAACTGAAGCTGGTATTATAGCTCAAACGTTACAAGACGTTTTACCAGAAGCTGTCCGTGAAACAGAAGACAGTAAGGGTAATAAAATACTCACTGTTTCTTCTCAAGCCCAGATTGCTCTTCTAGTTGAAGCTGTGAAAACACTTTCTTCTCGTGTAAAAGAACTTGAATCTAAACTTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3dbf7946048ad4c7fdac88f0df6a33934df1f981d3357ca852dbbe0883a701b8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4911
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank