Phage RBP Database

Genbank accession

LC616061.1_CDS_[47401..47709] [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Protein sequence

MKWAVIQAEQENDMNILKKLMQRLCGCGKHDGREHGQSLTVQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGTWENIGGMK

Physico‐chemical properties

protein length:	102 AA
molecular weight:	11490,17840 Da
isoelectric point:	5,62481
aromaticity:	0,01961
hydropathy:	-0,38824

Domain architecture

LC616061.1_CDS_[47401..47709]

1 102 aa

RBD 41–102

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR009640
RBD

IPR009640

LC616061.1_CDS_[47401..47709]

1102 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0291
ATT

DC_0291

LC616061.1_CDS_[47401..47709]

1102 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR009640	RBD	DC_0593	41	102	InterPro cluster	Bacteriophage 933W, L0121, tail fibre, C-terminal	C-terminal	Low	Positional only	120 proteins / 125 hits

Proteins with similar domain architecture

Phage

Stx2a-converting phage Stx2_12874 [NCBI] · taxon 2816170

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

LC616061.1_CDS_[47401..47709] [NCBI]

Genbank nucleotide accession

LC616061.1 [NCBI]

CDS location

range 47401 -> 47709
strand +

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)