Protein

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Genbank accession
YP_009214148.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Seq2Symm
C1 confidence 1,000
C1 1,000
C3 0,003
C2 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MINLRDRIYTVDINTKSYQVAKYKQYDNAIEFKINLLENNIEKDLTGYTAIANFQRPDGKIVYQSCTIENSIATTIIENNITEVAGDVIVEFTFYKDDLVVTTFSLKINIEKSIDKNSITEEPKWDYISVTINQVKEVVEGIEEIKETEEARKEAEIKRVEEFNSIKETFDSKVTEVTDAKNSMISDVNTTKDTLTTLIDEVNTVKAEVTTAKNTMISEVTTAKETMQTEVTDAINAIPTKEELKGVGIEIKGSLDNISALPVNPTLSDAYFVKSATIENQIDLYVWDNTNWVKVPDIKIKGENGDGLEFNWDGTRLGIRIEGQENYTYTDLKGQKGDKGDSIEFNWNGTRLGIKIEGQENYSYTELKGEQGYTPTIGENGNWWINNIDTQKPARGASLRILGKLDSIDNLPLDPTIGDCWIIGRNIYIYQTKWEDLGSLAGVDGKNLEFNWDGTQLGVRQQYELDYKYIDLKGDNIEFAWDGTRLGVRIEGQENYTYTDLKGQKGDSIEFSWDGTELGVRIEGQEDYSYTNLKGATGNKLEFNWNGSQLGIREEGQTEYIYTELRGEQGYTPAIGENGNWFINGEDTGKASKGKVTWNELLEKPKELDYIKKSTTFNSDGSITDILDSVSKTITKFNADGTIVDEKYIDNVLVSKVKTTFKGNQIEEIKEEVS
Physico‐chemical
properties
protein length:674 AA
molecular weight: 76110,62740 Da
isoelectric point:4,53674
aromaticity:0,09199
hydropathy:-0,61350

Domains

View on InterPro
Domain architecture
YP_009214148.1
1 674 aa
ATT 19–136 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Clostridium phage phiCD146 [NCBI] · taxon 1582151
Uroviricota Caudoviricetes Leicestervirus Leicestervirus CD146
Host
Clostridioides difficile [NCBI] · taxon 1496
Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Clostridioides Clostridioides difficile

Coding sequence (CDS)

Genbank protein accession
YP_009214148.1 [NCBI]
Genbank nucleotide accession
NC_028958.1 [NCBI]
CDS location
range 19338 -> 21362
strand +
CDS
GTGATAAATTTGAGAGATAGAATTTATACAGTAGATATTAACACTAAAAGTTACCAAGTTGCAAAATATAAGCAATATGATAATGCAATAGAATTTAAGATTAATTTATTAGAAAATAATATAGAAAAAGATTTGACAGGATATACAGCTATAGCAAATTTTCAAAGACCAGACGGGAAAATAGTTTATCAGAGCTGTACTATAGAAAATTCTATTGCAACAACTATAATAGAAAATAACATAACAGAAGTTGCGGGGGATGTAATAGTAGAGTTTACTTTCTACAAAGATGATTTAGTTGTTACTACTTTTTCTTTAAAGATTAATATAGAGAAAAGTATAGATAAAAACAGTATTACAGAAGAACCGAAATGGGATTATATCAGCGTTACAATAAATCAAGTAAAAGAAGTCGTCGAAGGCATAGAAGAAATAAAAGAAACAGAAGAAGCAAGAAAAGAAGCAGAAATTAAAAGAGTCGAAGAATTTAATAGTATAAAAGAAACTTTCGACTCTAAAGTTACAGAAGTTACAGACGCTAAAAACAGCATGATTAGTGATGTTAATACTACTAAAGATACTCTAACAACATTAATAGACGAAGTTAACACAGTTAAAGCGGAAGTTACAACAGCTAAAAATACTATGATTAGCGAAGTAACTACAGCTAAAGAAACTATGCAGACAGAAGTTACAGACGCTATTAATGCAATCCCCACAAAAGAAGAGTTAAAAGGGGTAGGAATAGAAATAAAAGGAAGTTTAGATAATATATCAGCACTTCCAGTCAATCCAACTTTAAGTGATGCTTACTTTGTAAAAAGCGCAACAATAGAAAACCAAATTGATTTATATGTTTGGGACAACACTAATTGGGTCAAAGTTCCTGACATAAAAATAAAGGGTGAAAATGGAGATGGCTTAGAATTTAATTGGGATGGCACGCGACTAGGTATAAGGATAGAAGGACAGGAGAATTATACTTATACAGATTTAAAAGGTCAAAAAGGCGATAAAGGTGATAGTATTGAATTTAATTGGAATGGCACACGATTAGGTATAAAGATAGAAGGTCAAGAAAATTATAGTTATACAGAATTGAAAGGGGAGCAGGGTTATACTCCAACAATAGGAGAAAATGGAAACTGGTGGATTAATAATATAGATACCCAAAAACCAGCTAGAGGGGCATCTTTGAGGATTTTAGGAAAATTAGATTCTATAGATAACTTACCATTAGACCCTACTATCGGAGATTGCTGGATTATAGGGAGAAATATTTATATATATCAAACTAAATGGGAAGACTTAGGTTCTCTAGCGGGCGTGGACGGCAAGAACCTAGAATTTAATTGGGATGGCACACAGTTAGGCGTTAGGCAACAATACGAATTAGATTATAAGTATATAGACCTCAAAGGTGACAATATCGAATTTGCATGGGATGGCACACGACTAGGTGTAAGGATAGAAGGACAGGAGAATTATACTTATACAGATTTGAAAGGTCAAAAAGGCGATAGCATTGAATTTAGTTGGGATGGTACGGAGCTAGGCGTTAGAATAGAAGGTCAAGAGGACTATAGCTATACAAATCTAAAAGGAGCGACAGGAAATAAATTAGAATTTAATTGGAATGGAAGTCAGCTAGGTATTAGAGAAGAAGGACAAACGGAATATATATATACAGAGCTTAGAGGGGAACAAGGTTATACTCCAGCAATCGGCGAAAACGGTAATTGGTTTATAAATGGAGAAGACACGGGGAAAGCGTCAAAAGGAAAAGTTACATGGAATGAGTTATTAGAAAAACCGAAAGAGTTAGATTACATTAAAAAAAGCACGACTTTTAATTCAGACGGCTCTATAACAGATATTTTAGACTCGGTTAGTAAAACTATAACTAAATTTAATGCAGATGGGACTATAGTAGACGAAAAATATATAGATAATGTATTAGTAAGTAAAGTAAAAACGACTTTTAAAGGTAATCAAATAGAAGAAATAAAAGAAGAGGTGAGTTAA

Genome Context

Tertiary structure

YP_009214148.1
ESMFold structure
Source ESMFold
pLDDT 74.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank