Protein

View in Explore
Genbank accession
YP_009214148.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MINLRDRIYTVDINTKSYQVAKYKQYDNAIEFKINLLENNIEKDLTGYTAIANFQRPDGKIVYQSCTIENSIATTIIENNITEVAGDVIVEFTFYKDDLVVTTFSLKINIEKSIDKNSITEEPKWDYISVTINQVKEVVEGIEEIKETEEARKEAEIKRVEEFNSIKETFDSKVTEVTDAKNSMISDVNTTKDTLTTLIDEVNTVKAEVTTAKNTMISEVTTAKETMQTEVTDAINAIPTKEELKGVGIEIKGSLDNISALPVNPTLSDAYFVKSATIENQIDLYVWDNTNWVKVPDIKIKGENGDGLEFNWDGTRLGIRIEGQENYTYTDLKGQKGDKGDSIEFNWNGTRLGIKIEGQENYSYTELKGEQGYTPTIGENGNWWINNIDTQKPARGASLRILGKLDSIDNLPLDPTIGDCWIIGRNIYIYQTKWEDLGSLAGVDGKNLEFNWDGTQLGVRQQYELDYKYIDLKGDNIEFAWDGTRLGVRIEGQENYTYTDLKGQKGDSIEFSWDGTELGVRIEGQEDYSYTNLKGATGNKLEFNWNGSQLGIREEGQTEYIYTELRGEQGYTPAIGENGNWFINGEDTGKASKGKVTWNELLEKPKELDYIKKSTTFNSDGSITDILDSVSKTITKFNADGTIVDEKYIDNVLVSKVKTTFKGNQIEEIKEEVS
Physico‐chemical
properties
protein length:674 AA
molecular weight: 76110,62740 Da
isoelectric point:4,53674
aromaticity:0,09199
hydropathy:-0,61350

Domains

View on InterPro
Domain architecture
YP_009214148.1
1 674 aa
ATT 19–136 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Clostridium phage phiCD146 [NCBI] · taxon 1582151
Uroviricota Caudoviricetes Leicestervirus
Host
Clostridioides difficile [NCBI] · taxon 1496
cellular organisms Bacteria Bacillati Bacillota Clostridia Peptostreptococcales

Coding sequence (CDS)

Genbank protein accession
YP_009214148.1 [NCBI]
Genbank nucleotide accession
NC_028958.1 [NCBI]
CDS location
range 19338 -> 21362
strand +
CDS
GTGATAAATTTGAGAGATAGAATTTATACAGTAGATATTAACACTAAAAGTTACCAAGTTGCAAAATATAAGCAATATGATAATGCAATAGAATTTAAGATTAATTTATTAGAAAATAATATAGAAAAAGATTTGACAGGATATACAGCTATAGCAAATTTTCAAAGACCAGACGGGAAAATAGTTTATCAGAGCTGTACTATAGAAAATTCTATTGCAACAACTATAATAGAAAATAACATAACAGAAGTTGCGGGGGATGTAATAGTAGAGTTTACTTTCTACAAAGATGATTTAGTTGTTACTACTTTTTCTTTAAAGATTAATATAGAGAAAAGTATAGATAAAAACAGTATTACAGAAGAACCGAAATGGGATTATATCAGCGTTACAATAAATCAAGTAAAAGAAGTCGTCGAAGGCATAGAAGAAATAAAAGAAACAGAAGAAGCAAGAAAAGAAGCAGAAATTAAAAGAGTCGAAGAATTTAATAGTATAAAAGAAACTTTCGACTCTAAAGTTACAGAAGTTACAGACGCTAAAAACAGCATGATTAGTGATGTTAATACTACTAAAGATACTCTAACAACATTAATAGACGAAGTTAACACAGTTAAAGCGGAAGTTACAACAGCTAAAAATACTATGATTAGCGAAGTAACTACAGCTAAAGAAACTATGCAGACAGAAGTTACAGACGCTATTAATGCAATCCCCACAAAAGAAGAGTTAAAAGGGGTAGGAATAGAAATAAAAGGAAGTTTAGATAATATATCAGCACTTCCAGTCAATCCAACTTTAAGTGATGCTTACTTTGTAAAAAGCGCAACAATAGAAAACCAAATTGATTTATATGTTTGGGACAACACTAATTGGGTCAAAGTTCCTGACATAAAAATAAAGGGTGAAAATGGAGATGGCTTAGAATTTAATTGGGATGGCACGCGACTAGGTATAAGGATAGAAGGACAGGAGAATTATACTTATACAGATTTAAAAGGTCAAAAAGGCGATAAAGGTGATAGTATTGAATTTAATTGGAATGGCACACGATTAGGTATAAAGATAGAAGGTCAAGAAAATTATAGTTATACAGAATTGAAAGGGGAGCAGGGTTATACTCCAACAATAGGAGAAAATGGAAACTGGTGGATTAATAATATAGATACCCAAAAACCAGCTAGAGGGGCATCTTTGAGGATTTTAGGAAAATTAGATTCTATAGATAACTTACCATTAGACCCTACTATCGGAGATTGCTGGATTATAGGGAGAAATATTTATATATATCAAACTAAATGGGAAGACTTAGGTTCTCTAGCGGGCGTGGACGGCAAGAACCTAGAATTTAATTGGGATGGCACACAGTTAGGCGTTAGGCAACAATACGAATTAGATTATAAGTATATAGACCTCAAAGGTGACAATATCGAATTTGCATGGGATGGCACACGACTAGGTGTAAGGATAGAAGGACAGGAGAATTATACTTATACAGATTTGAAAGGTCAAAAAGGCGATAGCATTGAATTTAGTTGGGATGGTACGGAGCTAGGCGTTAGAATAGAAGGTCAAGAGGACTATAGCTATACAAATCTAAAAGGAGCGACAGGAAATAAATTAGAATTTAATTGGAATGGAAGTCAGCTAGGTATTAGAGAAGAAGGACAAACGGAATATATATATACAGAGCTTAGAGGGGAACAAGGTTATACTCCAGCAATCGGCGAAAACGGTAATTGGTTTATAAATGGAGAAGACACGGGGAAAGCGTCAAAAGGAAAAGTTACATGGAATGAGTTATTAGAAAAACCGAAAGAGTTAGATTACATTAAAAAAAGCACGACTTTTAATTCAGACGGCTCTATAACAGATATTTTAGACTCGGTTAGTAAAACTATAACTAAATTTAATGCAGATGGGACTATAGTAGACGAAAAATATATAGATAATGTATTAGTAAGTAAAGTAAAAACGACTTTTAAAGGTAATCAAATAGAAGAAATAAAAGAAGAGGTGAGTTAA

Genome Context

Tertiary structure

YP_009214148.1
ESMFold structure
Source ESMFold
pLDDT 74.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank