Protein

View in Explore
Genbank accession
XYL45520.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSIVRDFGETLRYELETARRVPLRKKGLVLGKPQAPSVFGLTTPRNTAITAEFDERSYLVTYDRVTLQSHLSNALQAPGHGMLLQARSVKTTRDLLADINRTYDLELERDDIVDAPLALVFSTTKVVVTLSPDCIWFTGSLEIPLKGSYQQAGDSLIIGFDSNPHIGKDVNAGASTTLSRAGQFCHHIDYGPATAALRAMTWDNSHSWVNAQPAQIQAMVNAMNNVDGFGWVYNTGYGVKNNLLNGNVAYNGPIEGFDLKIRADVVDPDTYLYAERFPLCRKDMSHVLVYQPNASYGASNLSYYPMFIHYGEPVPQSYYDQPDKPPVHWWKLEKDLINSGTSQGQETFPDVVSFFDDEWGKCAALKATGLFPLGFSWDTNRDFTLSFKIARRDLLQEYQGMFGDSTGTAPVGAFVMATAGWFYMTQQTQRWSNALANITFRQKCEVMLCKRGRRYLVYVNGKCVNEAEFTEAQVPVPWTHFGKVNHFLKTTTRFSDIKLFDYCLNRDQVSRHYRGLF
Physico‐chemical
properties
protein length:517 AA
molecular weight: 58317,29900 Da
isoelectric point:6,64098
aromaticity:0,12186
hydropathy:-0,30638

Domains

Domains [InterPro]
IPR057701
STR
55–144
IPR057701 IPR013320
XYL45520.1
1 517
Architecture
STR
STR
STR 55-144 | STR 339-513 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL45520.1
1 517
Domain Start End Length (AA) Confidence
N-terminal 1 55 55 0,5911
Central domain 56 254 200 0,6657
C-terminal 255 517 262 0,8669
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-55
Central
56-254
C-terminal
255-517

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage vB_AerVM_332-Vera
[NCBI] 		3414679 Viruses >
Host Aeromonas veronii
[NCBI] 		654 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL45520.1 [NCBI]
Genbank nucleotide accession
PQ474292 [NCBI]
CDS location
range 136696 -> 138249
strand -
CDS
ATGTCCATCGTACGTGATTTTGGTGAGACTCTCCGTTACGAGCTTGAGACGGCGCGCAGAGTACCGCTTCGTAAGAAGGGTCTGGTACTCGGTAAGCCTCAGGCCCCTAGCGTATTCGGTCTGACCACTCCCAGAAATACAGCAATAACTGCCGAGTTCGACGAGCGTTCGTATCTCGTCACTTACGACCGAGTGACATTGCAGTCACATTTGTCGAATGCACTCCAAGCTCCCGGCCACGGTATGCTGCTCCAAGCCAGGTCAGTTAAAACGACCAGGGATCTGTTGGCCGATATTAACCGAACTTACGACCTGGAGTTAGAGCGCGACGATATCGTTGACGCTCCACTGGCATTGGTGTTTTCAACCACCAAGGTGGTCGTGACGCTGTCTCCGGACTGTATCTGGTTCACCGGCTCCTTGGAGATTCCGCTTAAAGGGAGTTACCAGCAAGCTGGTGATAGTCTAATTATCGGGTTCGACAGTAATCCGCACATCGGCAAGGACGTTAACGCTGGCGCCTCCACCACCCTGTCTCGCGCCGGTCAGTTCTGTCATCACATTGACTACGGTCCAGCTACAGCAGCGTTGCGGGCGATGACTTGGGATAACAGCCATAGTTGGGTCAACGCACAACCAGCGCAAATTCAGGCGATGGTCAACGCCATGAACAACGTCGATGGATTTGGTTGGGTGTATAACACGGGTTATGGTGTTAAGAACAACCTGCTCAATGGTAACGTTGCGTACAACGGACCAATCGAAGGGTTTGACCTGAAGATTCGTGCTGATGTAGTAGACCCAGATACGTACCTTTATGCTGAACGCTTCCCGCTCTGCCGTAAAGACATGTCGCACGTGCTGGTCTATCAGCCGAACGCCAGTTACGGCGCTTCGAACCTGAGCTACTACCCGATGTTCATCCACTACGGTGAACCAGTTCCTCAGTCGTACTACGACCAACCAGACAAACCTCCAGTACACTGGTGGAAACTCGAGAAAGATCTTATTAACTCGGGGACCAGCCAGGGACAAGAAACTTTCCCCGACGTGGTTAGTTTCTTCGACGATGAGTGGGGTAAGTGCGCAGCTCTCAAAGCTACCGGTTTGTTCCCATTAGGGTTCTCTTGGGATACGAATCGAGATTTCACTCTCTCGTTCAAGATCGCGCGTCGCGACCTACTCCAAGAGTATCAGGGAATGTTTGGCGATAGCACCGGGACGGCGCCAGTCGGCGCGTTCGTCATGGCTACCGCCGGTTGGTTCTACATGACCCAGCAGACACAACGCTGGAGTAACGCCCTGGCCAATATCACTTTCCGCCAGAAGTGCGAAGTCATGCTTTGCAAACGCGGGCGGCGCTATCTCGTCTACGTTAACGGCAAGTGTGTAAATGAGGCCGAGTTCACCGAGGCTCAGGTGCCGGTGCCTTGGACTCACTTTGGTAAAGTGAACCATTTTCTGAAGACCACAACTCGGTTCTCTGACATCAAATTGTTTGACTACTGTTTAAATCGTGACCAGGTTTCCCGTCACTATCGAGGACTTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b4e96e0d96605a01298c01774f62c581e612f5e1c5b26b94b8457d5335a70e36
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4647
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Giant Phages vB_AerVM_332-Vera and vB_AerVM_332-Igor and Siphophage vB_AerVS_332-Yulya Infecting the Same Aeromonas veronii Strain Babkin,I.V., Morozova,V.V., Kozlova,Y.N., Fedorets,V.A., Tikunov,A.Y., Ushakova,T.A., Bardasheva,A.V., Zhirakovskaya,E.V. and Tikunova,N.V. 2025 — GenBank