Protein

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Genbank accession
QPZ53359.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYTTIKKPSDYFNTVLFDGDSSSSKAITVGFRPDLTWQKSRNVAANFVLIDQVRGATKVISSDTTASEDTVDNGTGITTTNTGIIVSEASDWSSINRTGRNIVSWNWLGANGTASNTDGSISSTVSANTTSGFSIVKYTGNATSGATVGHGLGVTPKVIIIKGLGTTYNWIFGHNSLSTNWTNYLTLSTTDASAAATNIFNDTAPTSSVFSIGNALGVNTNSSDYIAYCFAEKTGYSKFGSWTGNGNADGPFVYTGFKPEFVILKNASGTNQWLMFDNAREPANVMGTYLEPNSSAAEANFDGFDFLSNGIKMRTSNGAWNTSGSTYIYMAFAEEPLVGDNPATAR
Physico‐chemical
properties
protein length:347 AA
molecular weight: 36806,95700 Da
isoelectric point:4,95400
aromaticity:0,11239
hydropathy:-0,21383

Domains

Domains [InterPro]
IPR055906
STR
8–337
IPR055906
QPZ53359.1
1 347
Architecture
STR
STR 8-337 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC024P
[NCBI] 		2796518 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53359.1 [NCBI]
Genbank nucleotide accession
MW273920.1 [NCBI]
CDS location
range 11889 -> 12932
strand -
CDS
ATGGCTTATACTACAATTAAAAAACCTTCTGATTATTTTAATACAGTTTTATTTGATGGTGACAGTTCATCTAGCAAAGCAATAACTGTTGGATTTAGACCTGATTTAACTTGGCAAAAAAGTAGAAATGTAGCAGCTAATTTTGTTTTAATTGACCAAGTAAGAGGAGCAACAAAAGTTATTTCATCTGATACTACTGCTTCTGAAGATACTGTTGATAATGGAACTGGAATTACAACAACAAATACAGGAATAATAGTTAGTGAAGCATCTGATTGGTCATCTATTAATAGAACTGGAAGAAATATTGTTTCATGGAACTGGTTAGGTGCTAATGGAACTGCATCTAATACAGATGGTTCTATAAGTTCTACAGTTTCAGCTAATACTACAAGTGGATTTAGTATTGTTAAATATACTGGTAATGCAACATCTGGTGCTACTGTTGGTCATGGTTTAGGAGTAACACCAAAAGTAATTATTATAAAAGGTTTAGGAACAACTTATAATTGGATATTTGGTCATAATTCTTTATCTACTAATTGGACAAATTATTTAACATTAAGTACAACTGATGCTTCAGCTGCAGCTACAAATATTTTTAATGATACAGCACCTACATCTTCTGTATTTTCAATAGGAAATGCTTTAGGAGTTAATACAAACAGTTCAGATTACATAGCTTACTGCTTTGCAGAAAAAACTGGTTATAGCAAGTTTGGAAGTTGGACTGGAAATGGAAATGCAGATGGACCATTTGTTTACACAGGATTTAAACCAGAATTTGTAATATTAAAAAATGCGTCTGGAACAAATCAATGGTTGATGTTTGATAATGCTAGAGAACCAGCGAATGTTATGGGTACTTATTTAGAACCTAATTCTTCTGCTGCAGAAGCTAATTTTGATGGATTTGATTTTTTATCAAATGGAATAAAAATGAGAACAAGTAATGGTGCTTGGAATACTTCAGGTTCAACATATATCTACATGGCATTTGCAGAAGAACCTTTAGTGGGAGATAACCCAGCAACAGCAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
49422d04e46c206044c1998980c80c50dff80ce45f8d4fdbf75ea61d3c3a54bc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9273
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. 2021 34227930 GenBank