Protein

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Genbank accession
QPZ53359.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,95
Seq2Symm
C1 confidence 0,830
C1 0,830
C3 0,023
D2 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAYTTIKKPSDYFNTVLFDGDSSSSKAITVGFRPDLTWQKSRNVAANFVLIDQVRGATKVISSDTTASEDTVDNGTGITTTNTGIIVSEASDWSSINRTGRNIVSWNWLGANGTASNTDGSISSTVSANTTSGFSIVKYTGNATSGATVGHGLGVTPKVIIIKGLGTTYNWIFGHNSLSTNWTNYLTLSTTDASAAATNIFNDTAPTSSVFSIGNALGVNTNSSDYIAYCFAEKTGYSKFGSWTGNGNADGPFVYTGFKPEFVILKNASGTNQWLMFDNAREPANVMGTYLEPNSSAAEANFDGFDFLSNGIKMRTSNGAWNTSGSTYIYMAFAEEPLVGDNPATAR
Physico‐chemical
properties
protein length:347 AA
molecular weight: 36806,95700 Da
isoelectric point:4,95400
aromaticity:0,11239
hydropathy:-0,21383

Domains

View on InterPro
Domain architecture
QPZ53359.1
1 347 aa
STR 8–337 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pelagibacter phage HTVC024P [NCBI] · taxon 2796518
Uroviricota Caudoviricetes Pelagibacter phage HTVC024P
Host
Candidadtus Pelagibacter sp. HTCC1062 [NCBI] · taxon 198252
Pseudomonadota Alphaproteobacteria Candidatus Pelagibacterales Candidatus Pelagibacteraceae Candidatus Pelagibacter Candidatus Pelagibacter communis

Coding sequence (CDS)

Genbank protein accession
QPZ53359.1 [NCBI]
Genbank nucleotide accession
MW273920.1 [NCBI]
CDS location
range 11889 -> 12932
strand -
CDS
ATGGCTTATACTACAATTAAAAAACCTTCTGATTATTTTAATACAGTTTTATTTGATGGTGACAGTTCATCTAGCAAAGCAATAACTGTTGGATTTAGACCTGATTTAACTTGGCAAAAAAGTAGAAATGTAGCAGCTAATTTTGTTTTAATTGACCAAGTAAGAGGAGCAACAAAAGTTATTTCATCTGATACTACTGCTTCTGAAGATACTGTTGATAATGGAACTGGAATTACAACAACAAATACAGGAATAATAGTTAGTGAAGCATCTGATTGGTCATCTATTAATAGAACTGGAAGAAATATTGTTTCATGGAACTGGTTAGGTGCTAATGGAACTGCATCTAATACAGATGGTTCTATAAGTTCTACAGTTTCAGCTAATACTACAAGTGGATTTAGTATTGTTAAATATACTGGTAATGCAACATCTGGTGCTACTGTTGGTCATGGTTTAGGAGTAACACCAAAAGTAATTATTATAAAAGGTTTAGGAACAACTTATAATTGGATATTTGGTCATAATTCTTTATCTACTAATTGGACAAATTATTTAACATTAAGTACAACTGATGCTTCAGCTGCAGCTACAAATATTTTTAATGATACAGCACCTACATCTTCTGTATTTTCAATAGGAAATGCTTTAGGAGTTAATACAAACAGTTCAGATTACATAGCTTACTGCTTTGCAGAAAAAACTGGTTATAGCAAGTTTGGAAGTTGGACTGGAAATGGAAATGCAGATGGACCATTTGTTTACACAGGATTTAAACCAGAATTTGTAATATTAAAAAATGCGTCTGGAACAAATCAATGGTTGATGTTTGATAATGCTAGAGAACCAGCGAATGTTATGGGTACTTATTTAGAACCTAATTCTTCTGCTGCAGAAGCTAATTTTGATGGATTTGATTTTTTATCAAATGGAATAAAAATGAGAACAAGTAATGGTGCTTGGAATACTTCAGGTTCAACATATATCTACATGGCATTTGCAGAAGAACCTTTAGTGGGAGATAACCCAGCAACAGCAAGATAA

Genome Context

Tertiary structure

QPZ53359.1
ESMFold2 structure
Source ESMFold2
pLDDT 94.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. 2021 34227930 GenBank