Protein

View in Explore
Genbank accession
WPK33104.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MALILHYTRNEDGTFDRKRYNVPPMEYVVANIPDGVPVRIYRGEIGDDTDVTENFEALKEDDVFHIIEGAGGGGGFLGKLLDPLGVLKFVTKLISPSQKTPKTSLANQQAESPNNSLTDRNNKPRPYERSYDICGRVQTIPNDLMTTYKVFNDAGVVVEYGYYDAGRGYLDIKAEDITDGDTKVQEITGTSVAVYAPFTSPNNTNTPQLLVGDPINQNLYITIASNEVDGAVLKAQNDIRVNPSDTGEISLQGATGVVRDNTGDSAFSEILSVGDIAVFNLILVKDVANVSGSYTVTYVDDFEVRVAAGGMLSEWQKLPSGFTPLTQGTEAWISPSNTYDKSLTDWTTLNRLEVERVVANIAAANGMYKDNGSKLRTSVTVELQYQLLDETGVPYGDVYSKQAVISGRSADYTGVTIYADLPMRSKVRVRARRVTDLDLSFEGTVVDEVSYINLYGQVRDTTPHYGNRTTVHSARKQTPRAAEIKQPQLRMVATEMVYKYLGNGTFDTVMTPNTQAIQSLIRLARDPVVGNLNLTTSNMDKLLATQTEIENYFGSAEAGQFCYTFDDYKMTMQDIISTIADAIFCTPYRKGQDILLDFERPRIGPEMVFTHRSKTTATEKWTRTFNDAQVYDSLKFSYIDPDTNVKETISIPAEGGVNTETYDSKGIRNYRQAYWAAYRRYQKNLLKKVTVSFTATEEGVFVLPGRAISVVKGSRVAPQDGYVVAVNGLTLTLSQPVTFTPGDDHSLILKKRDGGVQSVAVVPGSHDREVIMLSAPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGINYEADFYKYDGVAPFGSGFSGGFSNGFS
Physico‐chemical
properties
protein length:850 AA
molecular weight: 93617,70190 Da
isoelectric point:5,02772
aromaticity:0,09294
hydropathy:-0,33647

Domains

View on InterPro
Domain architecture
WPK33104.1
1 850 aa
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WPK33104.1
1 850 aa
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9904
Central domain 233 431 200 0,5131
C-terminal 432 850 418 0,1199
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage AV104 [NCBI] · taxon 3077250
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Escherichia coli [NCBI] · taxon 562
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
WPK33104.1 [NCBI]
Genbank nucleotide accession
OR352935.1 [NCBI]
CDS location
range 19216 -> 21768
strand +
CDS
TTGGCGCTGATATTACATTACACCCGTAACGAAGACGGTACTTTTGACCGCAAACGGTATAACGTACCTCCGATGGAATACGTCGTTGCTAACATCCCAGACGGGGTACCTGTGCGTATTTACCGCGGCGAGATTGGTGATGATACAGACGTAACGGAAAACTTCGAAGCGCTGAAAGAAGATGACGTTTTCCATATCATAGAGGGCGCTGGCGGCGGTGGTGGTTTTCTTGGTAAACTCCTGGACCCTTTGGGTGTGCTTAAATTTGTTACCAAGTTGATTTCTCCGTCGCAGAAAACGCCTAAAACGAGTTTAGCGAACCAGCAGGCGGAGTCTCCCAACAACAGCCTGACTGACCGAAACAATAAACCGCGGCCGTATGAACGGTCGTATGATATTTGCGGCAGGGTCCAGACTATCCCTAATGACCTCATGACTACGTATAAGGTCTTCAATGACGCAGGTGTGGTAGTTGAATACGGCTACTATGACGCCGGTCGCGGGTATCTTGATATTAAAGCCGAAGACATCACAGACGGCGATACTAAAGTACAGGAGATTACCGGAACTTCTGTAGCGGTATACGCCCCTTTTACGTCCCCTAACAATACAAATACGCCTCAGCTTCTGGTAGGGGATCCTATTAATCAAAATCTATACATAACTATTGCCTCGAACGAGGTAGATGGGGCCGTTCTTAAAGCGCAGAACGACATCAGGGTTAATCCCAGTGATACCGGTGAGATTTCATTGCAGGGGGCAACTGGTGTCGTCCGCGATAACACTGGCGACTCTGCTTTCTCTGAGATTTTATCAGTTGGGGACATAGCTGTTTTTAACCTTATTCTGGTAAAAGACGTGGCTAACGTCAGTGGTAGCTATACTGTTACATACGTAGATGACTTTGAGGTAAGAGTAGCCGCCGGAGGGATGTTGTCAGAATGGCAAAAATTGCCATCGGGATTCACTCCTTTAACGCAAGGTACCGAAGCATGGATTTCACCGTCGAACACTTACGATAAGTCGTTAACGGACTGGACTACTTTAAACCGCCTGGAAGTTGAACGCGTAGTAGCCAACATTGCGGCTGCTAATGGTATGTATAAAGACAACGGCAGTAAATTGCGCACGTCGGTAACTGTGGAGCTTCAGTATCAACTCCTTGATGAAACTGGCGTGCCGTACGGTGATGTTTACTCAAAACAGGCCGTTATATCAGGTCGTTCTGCGGATTACACAGGTGTTACTATTTACGCCGACTTGCCCATGCGGTCGAAAGTTAGGGTACGTGCCCGCCGCGTCACTGACCTGGACCTCAGTTTTGAGGGAACCGTGGTAGACGAGGTTTCCTACATCAATCTTTATGGGCAGGTACGCGACACTACACCACATTACGGCAACCGTACTACCGTGCACTCCGCACGTAAGCAGACGCCGCGGGCAGCGGAGATTAAGCAACCACAGTTACGTATGGTCGCCACAGAGATGGTGTACAAATACCTCGGCAACGGCACATTCGACACGGTTATGACGCCGAATACTCAGGCGATTCAGTCCTTAATCCGTCTCGCCCGCGACCCGGTAGTAGGTAATCTCAACCTAACAACATCCAATATGGACAAGTTGTTAGCTACTCAAACTGAGATAGAAAACTATTTCGGTAGCGCAGAGGCAGGCCAATTCTGCTACACTTTTGACGATTATAAAATGACCATGCAGGATATCATCAGCACAATAGCTGATGCTATTTTCTGCACTCCATATCGTAAAGGGCAGGACATATTGCTGGACTTCGAGCGCCCGCGGATTGGCCCGGAAATGGTGTTCACACATCGCAGCAAGACTACAGCTACGGAGAAGTGGACCCGAACGTTCAACGACGCTCAGGTATACGATAGTCTTAAGTTCTCCTACATCGACCCCGATACCAACGTCAAAGAGACAATCAGCATCCCAGCCGAAGGTGGTGTCAATACTGAAACGTATGACTCCAAAGGTATACGTAATTATCGTCAGGCGTACTGGGCGGCGTACCGTCGGTACCAGAAGAACCTGTTGAAGAAAGTCACGGTGTCCTTTACGGCGACAGAAGAAGGAGTTTTTGTGCTGCCGGGTCGCGCAATAAGCGTCGTTAAGGGTTCACGCGTAGCGCCTCAAGACGGCTATGTTGTTGCCGTTAATGGTCTTACTCTGACGTTATCACAACCGGTTACTTTTACCCCCGGAGACGACCACTCATTGATTCTTAAGAAGCGTGACGGTGGTGTTCAGAGCGTTGCAGTGGTTCCTGGAAGTCATGACCGTGAAGTGATTATGTTATCCGCGCCGCAGGAGGCAATTTACACAGGGAATAGCGCACTAAAAACTGAGTTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTTGACCCCGGAGATGACAGAACAGTTAAGATTACCGGGATTAACTATGAAGCAGATTTCTATAAATACGACGGCGTCGCGCCTTTCGGCAGCGGTTTCTCCGGCGGATTCAGCAACGGTTTTAGTTAA

Genome Context

Tertiary structure

WPK33104.1
ESMFold structure
Source ESMFold
pLDDT 82.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank