Protein

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Genbank accession
ADO97246.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,77
Protein sequence
MTRTVPGSGAVIEPIFDEVFGVRAVEVTNGGSGYSVSDPPRLTITGCGTPEVEALLYPIIDSDSGRIIHVRVLERGRGYDPLRLQIIPEQETPNVVTSFDINRIWQSHPNSQTVGSFTGTTDRLRIQSDNHPKPTWTQAEAAPGGGPLIDRSFDQTFVYRGGKDVPNPGERAEQTDKVTGILINGGLLHTPEWGVDGNVVPGHQIDTVKYDYVKNADQYDAVTEGNVRYYQSNKVIDEFELTNGVFDTGNLEVFTWNVKVELDNIMLNVTDVDETLGSVEVGRIVDEVQGNARGTIAKVVRNSQNVVTRVYLRLVSTGASFSENDVCLGSNGFNFTISGEPRTFPTGIFYIDFGPEAEEFGPFVPGQYYFAPENIQVQRNYLIIWNQSDSSNSQGTLGHPMRFSTTQDGPLNQNPGTLYYKSTGVTEAPAADYENPYRAIFIMNADESARIYYHCAHHRYMSGFEGDEGYMIFNPELEDEEPENNYYVRNFYQSDANDPNTIDRSRHTDGHSKILGMSFDGYPIYGPYGYNSSGAAAREVSSYRLRTTTELAGNRPQVNTISTVTYAVTIANGQFQFDGSRPAFLELNRGKTYIFNQTDASNDSQMLLIGTSDDGWHGIDPVIIGNTANLFAGSGVDYRIDGSSVSYQAYLSGFNLATTREIRFTVPVDAPAALYLFAYTSAGLGLRTVQEGYVLGDLVGDYIYDSSVGTLDEYNGKFDVTPDYPNGTYAYYMTEDGSGDPAYPYAIGPKYYGVPLFEGDTVPSLPEVFPSLATGDVILNTDGTVSYIKMTKKGDNYFGSAKAKILGGQGTGATGTPIVQTVTGLSLVGEGREYATPPTLIFEGGGGQGAQGAAEIDTLGKVTSINVVDDGEFYQEPPYILITGGGGIGAKAVATVDQGAVTGITVTDPGQGYTTPPNIIFTKLVNLKRKASARQALNSTTIYLTGLAKNVGASDSEIFVDSTDAFPGSGTIILNTETINYTSKSTGKFSGLTRGVNFNYDQRVILDDGQNDASGASTYKFNVGDRVIRRVENQNNKIAKVYDWNPNTRELLVVFEVDELAFIDGGRPSTEDAIVQFDAGVAASSGAGVLPHVTEANVGSSITTLTVPIGTIADTRFEDNDEQDGAGDGIADLVNTGTDFENQINLDGGIFSSLYGIEETQGGQNTTLFQVGDSIKDGSIPFKFATVSTAGALSDGVEHNASMKIFLDAANANGQNFSVNEIVTGSVSGVRGTVVSWDAAESSVIVQDVVPYNTGNINVGIAGVLYEFSHNSTIVDFLVQQAGTNYSATPTVAIENTGDIQATATVNMTTAGDQVASLTITNGGYGIPQTIDGTYNLHPTVTFTNDAGDTTGSGASAQAILGGEDLVGNGGARYRIKRIEYQAIVRS
Physico‐chemical
properties
protein length:1387 AA
molecular weight: 148923,16700 Da
isoelectric point:4,44409
aromaticity:0,09661
hydropathy:-0,27851

Domains

Domains [InterPro]
DC_0042
ATT
3–87
DC_0042 IPR025924 IPR025924
DC_0042
ATT
80–880
DC_0042
DC_0155
STR
675–1387
DC_0155
ADO97246.1
1 1387
Architecture
ATT
STR
ATT 3-880 | STR 881-1387
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADO97246.1
1 1387
Domain Start End Length (AA) Confidence
N-terminal 1 467 467 0,8221
Central domain 468 941 475 0,1991
C-terminal 942 1387 445 0,0621
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-467
Central
468-941
C-terminal
942-1387

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SM1
[NCBI] 		444859 Uroviricota > Caudoviricetes > Pantevenvirales > Thetisvirus > Thetisvirus ssm1
Host Synechococcus sp. WH 6501
[NCBI] 		166310 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO97246.1 [NCBI]
Genbank nucleotide accession
GU071094 [NCBI]
CDS location
range 75617 -> 79780
strand +
CDS
ATGACAAGAACAGTTCCTGGATCTGGTGCCGTTATTGAGCCAATTTTTGACGAAGTATTTGGTGTTCGAGCGGTAGAAGTAACAAATGGAGGATCAGGTTACTCCGTTAGTGATCCCCCGCGTCTAACAATAACTGGGTGTGGCACTCCTGAAGTTGAAGCACTATTATATCCAATCATTGATTCAGATTCTGGTCGTATTATTCACGTCCGTGTTTTGGAAAGAGGAAGGGGATATGATCCTCTTAGACTACAGATTATCCCTGAGCAAGAAACTCCCAATGTAGTCACATCATTTGATATCAATCGAATTTGGCAGTCGCACCCCAATTCACAAACCGTTGGATCGTTTACAGGAACTACTGATAGACTTCGTATACAATCTGATAATCACCCTAAACCCACTTGGACTCAGGCAGAAGCAGCACCTGGTGGTGGTCCTTTAATTGATAGATCTTTTGATCAAACATTTGTTTATAGGGGTGGTAAGGATGTTCCTAATCCTGGTGAGCGTGCGGAACAAACGGATAAAGTCACAGGTATTTTAATAAACGGTGGGTTGTTACACACTCCTGAATGGGGTGTTGATGGTAATGTTGTTCCTGGTCATCAAATTGATACAGTAAAATATGATTATGTAAAAAATGCTGATCAATATGACGCAGTAACTGAAGGTAATGTTAGATATTATCAGTCAAACAAAGTAATTGATGAGTTTGAACTGACTAATGGTGTTTTTGACACAGGTAATTTGGAAGTTTTTACCTGGAATGTCAAGGTAGAACTTGATAATATTATGTTGAATGTTACTGATGTTGATGAAACATTGGGATCAGTTGAAGTTGGTAGAATTGTTGATGAAGTTCAGGGTAATGCTAGAGGCACAATTGCTAAGGTTGTTAGAAATTCTCAAAATGTAGTTACTAGAGTATATCTTAGATTAGTTTCTACAGGTGCATCTTTTTCTGAGAATGACGTATGTTTGGGATCAAATGGATTTAACTTCACTATTAGTGGTGAACCTAGAACTTTCCCGACTGGTATTTTCTATATTGATTTTGGTCCAGAAGCAGAAGAGTTTGGACCTTTTGTTCCTGGACAGTATTACTTCGCACCTGAAAATATTCAGGTTCAAAGAAATTATCTGATTATTTGGAATCAATCTGATTCTAGTAATTCACAGGGGACTCTTGGTCATCCAATGCGTTTTAGCACAACTCAAGATGGACCTCTGAATCAGAATCCTGGAACTCTGTATTATAAGAGCACTGGTGTAACTGAGGCACCTGCTGCTGATTATGAAAATCCATATCGAGCGATTTTCATCATGAATGCAGATGAGTCTGCACGCATTTATTATCATTGTGCTCATCACAGATATATGTCTGGATTTGAGGGTGATGAAGGATATATGATCTTCAATCCAGAACTTGAAGACGAAGAACCCGAAAATAATTATTACGTTAGAAATTTCTATCAATCGGATGCAAATGATCCTAATACGATTGATAGATCACGTCATACTGATGGGCACTCCAAAATTCTTGGTATGTCTTTTGACGGTTATCCGATTTATGGACCGTATGGATATAACTCTAGTGGTGCTGCTGCTAGAGAAGTATCATCTTATAGACTTAGAACTACAACAGAATTAGCTGGTAATAGACCACAAGTCAATACTATAAGCACTGTCACTTATGCAGTCACTATTGCTAATGGTCAATTCCAGTTCGATGGATCACGTCCAGCATTCTTAGAACTCAATAGAGGAAAGACTTACATTTTCAATCAGACTGATGCGTCTAATGATAGTCAGATGCTTCTGATTGGCACTTCTGATGATGGATGGCATGGTATTGATCCTGTTATTATCGGAAATACTGCTAATTTATTTGCTGGTAGTGGTGTTGATTATCGTATTGATGGGTCTTCAGTTTCATATCAGGCATATTTGTCTGGATTCAATTTAGCAACTACTCGTGAGATCAGATTTACTGTTCCTGTTGATGCTCCTGCAGCTCTGTATTTGTTTGCATATACTTCAGCAGGTCTTGGTCTCAGAACAGTTCAGGAAGGTTATGTTCTTGGAGATTTAGTTGGTGATTACATTTATGATTCTAGTGTGGGAACACTGGATGAATATAATGGTAAGTTTGATGTAACACCAGACTATCCTAATGGCACTTATGCATATTACATGACTGAGGATGGTAGTGGTGATCCTGCTTATCCTTATGCGATTGGTCCGAAATATTATGGTGTTCCTTTATTTGAAGGTGATACTGTTCCTTCTTTACCTGAAGTATTCCCATCACTAGCAACTGGTGATGTCATCTTGAATACTGATGGCACAGTTTCTTACATCAAGATGACTAAGAAAGGCGATAATTATTTTGGTTCTGCAAAAGCAAAAATTCTTGGTGGACAAGGAACTGGAGCAACAGGAACACCTATTGTTCAAACAGTCACTGGTTTGTCTCTTGTCGGAGAAGGTAGAGAATATGCAACTCCACCAACTCTTATTTTTGAAGGTGGTGGTGGACAAGGTGCTCAAGGTGCTGCTGAAATTGACACTCTTGGTAAAGTTACCTCTATTAACGTTGTAGACGATGGTGAGTTTTATCAAGAACCCCCATATATTTTAATTACTGGTGGCGGCGGTATTGGTGCTAAAGCCGTAGCAACAGTTGATCAAGGTGCTGTTACAGGAATTACTGTTACTGATCCTGGTCAAGGATATACAACTCCACCAAATATTATCTTTACTAAGTTAGTAAACCTTAAGCGTAAGGCGAGTGCTCGTCAAGCACTAAACTCGACTACAATTTATCTCACAGGTCTGGCTAAGAATGTTGGTGCATCTGATTCAGAGATTTTTGTAGATTCTACAGATGCTTTCCCTGGTTCGGGCACAATCATTCTGAATACAGAAACAATTAATTATACTTCCAAATCTACAGGTAAGTTTTCTGGTCTTACCAGAGGTGTTAACTTTAACTATGATCAGCGTGTTATCTTAGATGATGGTCAAAATGATGCTTCTGGCGCTTCAACTTATAAATTCAATGTTGGTGACCGAGTAATTCGTAGAGTTGAAAACCAGAATAACAAGATTGCTAAAGTATATGACTGGAATCCTAATACTAGAGAACTTCTGGTTGTCTTTGAAGTTGATGAATTAGCATTTATTGATGGTGGTAGACCCTCAACCGAAGATGCTATCGTTCAGTTTGATGCTGGCGTTGCTGCAAGTTCTGGAGCAGGAGTTCTTCCTCACGTTACTGAAGCAAACGTAGGAAGTTCGATTACAACTTTGACAGTTCCTATCGGAACTATTGCTGATACTAGATTTGAAGATAATGATGAACAAGATGGCGCTGGTGATGGTATTGCTGATCTGGTAAATACTGGAACAGACTTTGAAAACCAAATCAATCTTGATGGTGGTATCTTCAGTTCTCTCTATGGTATTGAAGAAACTCAAGGTGGACAAAACACCACTCTATTCCAAGTTGGCGATAGTATTAAAGATGGTAGCATTCCGTTCAAATTTGCCACTGTATCTACTGCTGGTGCACTGAGTGATGGTGTTGAACATAATGCATCTATGAAGATTTTCTTAGATGCTGCAAATGCTAATGGTCAAAACTTTAGTGTTAATGAAATCGTTACTGGTTCTGTTTCTGGTGTTCGTGGAACAGTTGTTTCTTGGGATGCTGCTGAAAGTTCAGTAATTGTTCAGGATGTTGTTCCATATAACACAGGAAATATTAACGTTGGTATTGCTGGTGTTCTGTATGAGTTCTCTCATAACAGCACAATCGTTGACTTCTTAGTTCAGCAAGCAGGAACAAACTATAGCGCAACTCCTACAGTTGCAATTGAAAATACTGGAGATATTCAGGCAACGGCAACTGTTAATATGACGACAGCAGGTGACCAGGTTGCATCACTTACTATTACAAATGGTGGATATGGAATTCCTCAAACTATTGATGGAACTTACAATCTTCACCCAACGGTTACATTTACTAATGATGCTGGAGATACAACAGGTTCTGGTGCTTCTGCACAAGCAATTCTTGGTGGAGAAGACTTGGTAGGAAACGGCGGTGCCCGTTATAGAATCAAGAGAATTGAGTATCAAGCAATCGTTCGTTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
50e516814fef4006f6dca43c72bd0c0dce0afbcad5ad9c6d5d008e71a10f48d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4479
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 6501-1 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank