Protein

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Genbank accession
QAX96198.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSKTVVGRIRGDKYKGHNPNQIYKKLDEVYISGMAFLCLEDIEINSNIPLTDVTKWQEFASLETLRIHYAHDVNAEYFKDEQMWVGGKVYVALADIPENSNVDLTDDTKWEELLASEALAPTANDNITITGFTDLGDGNWQVTPPAGYVHYVHIAGASPNYFAEVSTIVELSKIGDWTREGGQLTIRWPSNLNDLDVFLTMGSSSSVAYYGMEVDEPGEIHNQNTYGGLRGFTVTALAHLFHCKAENANFHGFDMQFPGATLSHCESHHNGQWDKGETGNNVGHGVLMRRGGTVRHHKSYCQAEDGYQIGTAVQGNVAENDEFTLEHCEAYYCSEDMFDIKETGKKLTIRHFRGHGALDSAINYHPNVGSGLVEITDGRFSGTVQMLRVAQVESSIPAKFNTARNVFDASNRGWSDSSAPCFDWKASIDNADAYFVSMADVFIGGGTRGISDKHVVNIKGAGKVKLFNPTIHVPSTPNAGDVSAIGMYGTAAVEIYNACLTNYGGGTRGILEVDDNTRSIKIADSVMYVKDGDDNTVYVTVGSTTYTKADIEGANFGGEGNIVDGSVELTNLYIKSPNYMDEANNLLAPLYITPHMANHGLAVNAPMKDVMGLPFNHWSWMGGSENVSMGVGAYHAYSGRMLRAKNSHTLAK
Physico‐chemical
properties
protein length:652 AA
molecular weight: 71283,58620 Da
isoelectric point:5,22432
aromaticity:0,09663
hydropathy:-0,32761

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAX96198.1
1 652
Domain Start End Length (AA) Confidence
N-terminal 1 127 127 0,5363
Central domain 128 534 408 0,9700
C-terminal 535 652 117 0,5225
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-127
Central
128-534
C-terminal
535-652

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VmeM-Yong XC31
[NCBI] 		2500766 No lineage information
Host Vibrio mediterranei
[NCBI] 		689 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAX96198.1 [NCBI]
Genbank nucleotide accession
MK308674.1 [NCBI]
CDS location
range 204689 -> 206647
strand +
CDS
ATGTCTAAAACTGTTGTGGGTCGAATTCGTGGCGATAAATATAAAGGCCACAATCCGAACCAAATTTACAAGAAGTTGGACGAAGTCTACATTTCAGGTATGGCATTCCTTTGTCTCGAGGATATAGAGATTAACTCTAATATCCCTTTGACGGATGTTACGAAGTGGCAAGAGTTCGCTTCGCTTGAAACTCTACGTATCCACTACGCACATGACGTGAATGCTGAGTACTTTAAAGACGAGCAGATGTGGGTAGGCGGTAAAGTGTATGTTGCTTTAGCAGATATCCCTGAAAACTCTAATGTAGATTTAACCGACGACACTAAGTGGGAAGAACTTCTTGCTAGTGAAGCTCTTGCTCCTACGGCTAACGACAACATCACCATCACAGGCTTTACTGACCTGGGCGATGGTAATTGGCAAGTGACGCCCCCTGCGGGTTACGTACATTACGTACATATTGCTGGCGCCTCGCCTAACTACTTCGCTGAAGTTTCTACTATTGTAGAACTTTCTAAGATTGGTGACTGGACGCGTGAAGGCGGACAGCTAACTATCCGTTGGCCTTCTAACCTAAACGACCTGGACGTGTTCCTCACTATGGGTTCTAGCTCCTCTGTGGCATACTACGGCATGGAAGTAGACGAGCCTGGGGAAATCCATAACCAAAACACTTACGGTGGTTTGCGTGGCTTTACAGTTACGGCTCTGGCACATCTGTTCCATTGTAAAGCAGAGAATGCTAACTTCCACGGTTTCGATATGCAGTTCCCTGGAGCTACACTGAGTCATTGTGAGAGCCATCACAACGGTCAGTGGGACAAAGGCGAGACAGGTAACAATGTCGGTCACGGTGTTCTTATGCGTCGTGGCGGTACAGTGCGCCACCATAAGTCATATTGTCAAGCTGAAGATGGTTACCAAATTGGTACAGCCGTTCAAGGCAATGTTGCAGAGAACGATGAGTTTACTCTGGAACACTGTGAAGCGTACTACTGTTCTGAGGACATGTTCGATATTAAAGAGACAGGTAAGAAATTAACCATTCGTCACTTTAGAGGACATGGCGCACTCGACTCAGCAATCAACTACCACCCGAATGTAGGCTCGGGTTTAGTAGAGATTACAGATGGGCGCTTCTCAGGCACCGTACAGATGCTTCGCGTCGCTCAGGTTGAATCTAGCATCCCTGCTAAGTTCAACACTGCCCGTAATGTCTTCGATGCTTCTAACCGTGGCTGGTCAGATAGTTCTGCTCCATGTTTCGATTGGAAGGCCAGTATCGATAATGCAGATGCTTACTTTGTCTCTATGGCGGACGTTTTCATCGGCGGCGGTACTCGCGGTATCTCTGACAAGCACGTAGTCAACATCAAGGGCGCTGGTAAGGTTAAACTGTTTAACCCGACCATTCACGTGCCTTCTACTCCGAACGCAGGAGACGTTTCTGCAATCGGTATGTATGGTACGGCCGCTGTTGAGATTTACAACGCGTGCCTAACTAACTATGGCGGTGGTACCCGCGGCATCCTTGAAGTTGACGATAACACTCGCAGTATTAAGATTGCAGATTCTGTAATGTATGTCAAAGACGGGGACGACAATACGGTCTATGTGACTGTTGGTTCGACTACCTATACTAAGGCAGACATTGAAGGTGCAAACTTCGGCGGGGAAGGCAACATCGTAGACGGTAGCGTGGAGCTAACTAATCTATACATCAAATCGCCTAACTACATGGACGAAGCTAATAACCTACTAGCTCCTCTTTACATTACGCCACATATGGCAAACCACGGTCTAGCTGTGAATGCGCCAATGAAAGACGTAATGGGTCTACCATTCAACCACTGGAGTTGGATGGGCGGTTCTGAGAACGTTAGTATGGGCGTTGGCGCTTACCATGCCTACAGCGGACGAATGCTCCGTGCTAAGAATTCACATACTCTAGCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c5ef4ccd2c44acfb4de3015baf17e899da802d0be635652d82e9567cadd04ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6274
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50