Protein

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Genbank accession
QIG67267.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,51
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLKATYESVPTEAEHYFEQHRWEWQDRFLRGTTSHYDPIFTPLFTSLFTALNFSAGTAALLGAGAAAIATTALSIGLQALLAPKPPKPEDGKVPKVQSVPYRWWGVGRGRVAGAYMLWEASGKRLYAVQAIAGHKIKSINRYWLHDDEVTLQSNGVIQPGTNYNSNVQIFSRLGDVPEGPYTSISADLASSGVWTNNHRGDGQASVAMICTSSSAERQNKRFPYGPPQLSVEADLALCWDFRDPLQDPEDPDTWEWTQNAAIIMAWHQCFNEFGHRRDYRRAILPVLDMWQEEADVCDEFVPLAGGGFERRYECNGIDTTENDPKAATNAILASCDGWMCERGDGALLFIVGKFRGKYITTLTDADIVGHQIEYDVLFEDECNRLIPKFNFPEIGYATSDTDFFEDTAAQLVAGRVLAQEANYQWVQQWRQARRLGKRDWLRLQEKVTGQLNVRLSGINSVYSRWVRLVTPNTLPKLDGAIVENRKSVLSLLQGGFVMDIMKHPDDIDEWNPATDEGQMPSTPPKTDAGGILTPVINLVQARPNADSVYFRVLIIDPDDDSLIPVVRYRLADAGSGSPGPWIEQRFPNPVPSGGFIDMSTNMVPPNKLHNIQVAFIASDGDYGPWSVTANVTSTVDPVAPGTPINMSAVNASGTVTVSAQAANDNTKVLIFKRGTTGQTYAAATQIATRNVVANQVINITDTPGAGTWKYWCGAENGSGIPSAAQASSTVTV
Physico‐chemical
properties
protein length:733 AA
molecular weight: 80563,47450 Da
isoelectric point:5,09024
aromaticity:0,09550
hydropathy:-0,29209

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_3
[NCBI] 		2509762 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG67267.1 [NCBI]
Genbank nucleotide accession
MN988468 [NCBI]
CDS location
range 21877 -> 24078
strand +
CDS
ATGAGCCTGAAGGCGACGTATGAGAGCGTCCCCACTGAGGCGGAGCACTATTTCGAGCAGCATCGCTGGGAGTGGCAGGATCGCTTTTTGCGTGGAACCACATCGCATTATGACCCGATTTTTACGCCGCTGTTCACGAGCCTGTTCACGGCCCTCAACTTCTCGGCGGGGACGGCAGCTCTGCTCGGAGCGGGCGCGGCTGCGATCGCGACCACGGCGCTATCGATCGGCCTCCAGGCGCTGCTCGCGCCGAAGCCACCAAAGCCCGAAGATGGCAAGGTCCCGAAGGTTCAGTCGGTCCCTTATCGGTGGTGGGGCGTCGGCCGCGGGCGTGTTGCCGGCGCCTACATGCTGTGGGAGGCGTCAGGCAAGAGGCTATATGCCGTTCAGGCGATCGCCGGGCATAAGATCAAGTCGATCAACCGGTATTGGTTGCACGACGATGAGGTGACCCTGCAGAGCAACGGCGTAATCCAGCCGGGGACAAACTATAATTCTAATGTCCAGATCTTCAGCCGCCTTGGCGATGTTCCGGAAGGGCCATACACGTCGATCTCCGCGGATTTGGCATCTAGTGGCGTCTGGACAAACAATCATCGTGGAGACGGGCAAGCGTCTGTTGCCATGATCTGCACGAGCTCGTCAGCTGAGCGGCAGAACAAGAGGTTCCCATATGGACCGCCGCAATTGTCCGTGGAAGCCGATCTCGCCCTCTGCTGGGATTTCCGCGATCCGCTGCAGGATCCGGAAGACCCTGATACATGGGAGTGGACGCAAAACGCTGCCATCATCATGGCCTGGCATCAGTGCTTCAACGAGTTCGGCCATCGCCGGGATTATAGGCGCGCCATCCTGCCGGTTCTCGACATGTGGCAGGAAGAGGCGGACGTCTGCGACGAATTCGTGCCGCTGGCCGGCGGCGGGTTCGAGCGCCGATATGAGTGCAACGGCATTGACACGACCGAGAACGATCCGAAAGCTGCCACCAATGCGATCCTGGCCTCTTGCGATGGCTGGATGTGCGAGCGCGGCGACGGGGCGCTCCTCTTCATCGTCGGTAAGTTCCGCGGCAAGTACATCACCACCCTGACCGATGCCGACATCGTCGGGCATCAGATCGAATATGATGTGCTCTTCGAGGACGAGTGCAATCGGCTGATCCCGAAGTTCAATTTCCCTGAGATCGGATATGCCACATCCGACACCGACTTCTTCGAGGACACGGCGGCGCAGCTGGTCGCCGGCCGCGTGCTGGCGCAGGAGGCCAATTACCAGTGGGTGCAGCAGTGGCGGCAGGCAAGGCGTCTCGGCAAGCGCGATTGGTTGCGCCTTCAGGAGAAGGTGACCGGCCAGCTCAATGTTCGGCTGTCCGGGATCAACTCGGTCTACAGCCGGTGGGTTCGGCTCGTCACACCAAACACACTGCCAAAGCTGGACGGCGCGATCGTCGAAAACCGCAAGTCCGTGCTGTCGCTCCTGCAGGGCGGCTTCGTCATGGACATCATGAAGCATCCCGACGACATCGACGAATGGAACCCCGCAACTGATGAAGGACAGATGCCGTCAACGCCTCCGAAGACCGACGCCGGCGGAATTCTGACGCCCGTGATCAATCTGGTGCAGGCGCGGCCGAACGCCGACAGCGTCTATTTCAGGGTGCTCATCATCGACCCAGACGACGATAGCCTTATTCCTGTCGTCAGGTATCGGCTTGCAGATGCAGGTTCGGGCTCGCCCGGGCCGTGGATAGAGCAGCGGTTCCCGAACCCGGTACCGTCCGGTGGCTTCATCGACATGAGCACCAACATGGTGCCGCCGAACAAGCTTCATAATATCCAGGTGGCGTTCATCGCTTCCGACGGTGACTATGGGCCTTGGTCGGTCACGGCGAACGTCACCTCCACCGTTGACCCGGTCGCTCCGGGCACGCCGATCAATATGTCTGCGGTCAATGCCTCGGGCACCGTCACCGTCAGCGCCCAGGCTGCGAACGACAACACCAAGGTGCTGATATTCAAGCGCGGCACCACCGGGCAGACCTATGCCGCGGCCACGCAAATCGCCACGCGCAATGTGGTGGCGAACCAGGTCATCAACATCACCGACACGCCGGGCGCTGGAACCTGGAAATACTGGTGCGGAGCTGAAAACGGCTCCGGCATCCCGTCCGCAGCGCAAGCTTCATCAACTGTCACCGTCTGA

Tertiary structure

PDB ID
4f5e6866f4ddc86e7c56162199bbdfea01fe292f67e9f8bb296be36bf4523d8c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8627
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank