Protein

View in Explore
Genbank accession
XVC01759.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MTNPTLITTSFAENGDKNIIPESVGANPQNATMQAGFPPITQQKISEGGIPPERNDFNGILNLYGQHIVHLNKGLPYEFDQAFADKIGGYPLNARIMLSNGDIVKNTVPNNTVDPNVDMTGWVKTNSASQIFDDLFGLSQSVINGNVITVDNFGAKGDGVTDDSAAFQAYCNSPLTGQNLYLGAKGRYIIKNQVDLKGKGIVGNGCGKVSEFYYNLGCIDVDGSSPDLQGKTAFINCGPTIQNLTARCSNGAGKQVSFVEIDGYLANISYVTIVNFYNQIVVKEALVGFNINNAWLYYSQNAGIYCEDPKNRVSTTGTFHNMYFQLGDGYAMIFDRDIHGSDFDNIIFESMNGGIKARTVANCGFGKFWCENLKTATSKDWLEVTGANSCYGNSFTGYVKLLGGWTSKTSPTLDSLSTNNYGGVSVSAEGISIVTAGNKAKMLMLPSGFKTGNAVIDETHINPSTVTPITKRRVIGADASGAQYLASDTYTKLSRKWSTYNHGSNNAGAFYAPMMLTYDQSFSTPQNNNGWQIVKESTGVYRIERVSGNISVITNGHILVGSPLMGSRLGTGSGATHGLQMIETYAGSWTSYAEAAGFKVFWRDSTGALVDPYRFTVAFTATS
Physico‐chemical
properties
protein length:623 AA
molecular weight: 67132,37270 Da
isoelectric point:5,94953
aromaticity:0,10594
hydropathy:-0,21220

Domains

Domains [InterPro]
IPR012334
132–501
IPR012334
IPR011050
142–387
IPR011050
IPR024535
148–357
IPR024535
XVC01759.1
1 623
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AB_NC1
[NCBI] 		3433628 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVC01759.1 [NCBI]
Genbank nucleotide accession
PV693690.1 [NCBI]
CDS location
range 23042 -> 24913
strand -
CDS
ATGACAAATCCAACACTTATTACAACCTCATTCGCTGAAAATGGCGATAAAAATATCATCCCTGAATCAGTTGGCGCTAACCCGCAAAATGCAACTATGCAAGCTGGATTCCCGCCAATTACTCAGCAAAAGATTTCTGAGGGTGGTATTCCTCCTGAGCGAAATGACTTTAATGGAATTTTAAATTTATATGGTCAGCACATTGTTCATTTAAATAAGGGTCTACCTTATGAATTTGATCAAGCATTTGCTGACAAGATTGGGGGGTATCCACTGAATGCACGAATCATGCTTTCAAATGGGGATATTGTTAAAAATACAGTGCCAAACAACACCGTAGATCCAAATGTGGATATGACGGGGTGGGTAAAAACCAACTCTGCAAGTCAAATTTTTGACGATCTTTTTGGTTTATCACAATCAGTAATTAACGGAAATGTCATTACTGTTGATAATTTTGGCGCAAAGGGCGATGGCGTTACTGACGACAGTGCAGCATTTCAAGCATATTGTAATAGTCCCTTAACTGGACAAAATCTGTATCTTGGTGCGAAAGGTCGATACATTATCAAGAACCAAGTAGACCTTAAAGGCAAGGGTATAGTGGGGAACGGTTGTGGTAAGGTAAGTGAATTTTATTATAATCTTGGTTGTATTGATGTTGATGGCTCAAGCCCTGATCTTCAGGGTAAAACGGCATTCATTAATTGTGGTCCTACAATCCAAAATCTTACTGCAAGATGCTCTAATGGAGCCGGAAAACAAGTTTCATTTGTTGAAATCGACGGGTATTTAGCAAATATTTCTTATGTCACGATTGTAAACTTTTACAATCAAATCGTAGTAAAAGAGGCACTTGTTGGCTTTAACATCAATAACGCTTGGCTGTACTACTCTCAAAACGCTGGTATCTACTGCGAAGATCCTAAAAACCGTGTAAGTACAACCGGAACATTCCATAACATGTATTTCCAATTAGGTGACGGTTATGCAATGATTTTTGATAGAGATATTCATGGTAGTGATTTCGATAATATTATTTTTGAAAGCATGAATGGTGGTATCAAAGCTAGAACTGTGGCGAATTGCGGGTTTGGTAAATTCTGGTGTGAGAACTTAAAGACAGCAACGTCAAAGGACTGGCTAGAAGTCACTGGTGCTAATAGCTGTTATGGAAATAGCTTTACTGGCTATGTTAAATTATTAGGCGGGTGGACATCAAAAACATCACCAACGCTAGATTCATTGTCAACAAATAACTATGGTGGTGTATCGGTTAGTGCAGAGGGTATCTCTATTGTTACTGCTGGCAATAAAGCAAAAATGCTTATGCTACCAAGCGGTTTTAAGACGGGGAACGCCGTTATTGATGAAACGCACATTAACCCATCTACTGTAACACCTATCACCAAGCGCCGTGTTATCGGCGCAGATGCTTCTGGCGCTCAGTATCTTGCATCGGATACGTACACTAAATTATCTCGTAAATGGAGTACGTATAATCATGGTTCTAACAACGCGGGTGCATTCTATGCACCAATGATGCTGACTTATGATCAGTCTTTTAGCACACCTCAAAACAACAATGGCTGGCAAATCGTCAAAGAGTCTACTGGAGTTTATAGAATTGAGCGCGTTTCGGGTAACATTTCAGTAATTACAAACGGGCATATTCTTGTTGGCTCGCCGCTAATGGGTTCTAGATTGGGAACTGGCTCAGGAGCTACTCATGGGTTGCAAATGATCGAAACTTATGCCGGTTCGTGGACTTCTTACGCGGAAGCGGCTGGGTTCAAAGTGTTCTGGCGAGATTCTACCGGAGCTCTGGTAGATCCATACAGGTTTACAGTTGCATTTACAGCAACGAGTTAA

Tertiary structure

PDB ID
780b00881b4d14184dd6319d6bdefb45cf8216ff4998098b534b838349920884
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7844
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genomic DNA sequence of Acinetobacter phage AB_NC1 Wang,Y., Wang,S. and Zhang,Z. 2016-02-08 — GenBank