Protein

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Genbank accession
YAS76274.1 [GenBank]
Protein name
tail assembly connector tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANIAFTKRSFAGGEVSPQVLQSCSDRDIYAQGLSQALNTIVLSDGSLVRRPSNHCYSSLRIPPKSRRIISFALGGDKTALFVFGQKKMMIATVNGIKPPQYVRPYDTPYHAYDVEHLDFARMGDLIVLVHSRYPPYQIEFTADDVIFKPMVFEPPPWLGRCQVNGKKHDAKLYIDPLPSTRKGKMTVKSTSPLFKESDVGRMLRLGWLPKNWKEKTLYPENAFIEMFGKVYQSITGGVSGDEWKDNPRDTYIKDGKVTWKVIASSQELSTGKDGKPILGTGGKYRTPYYVWGEIVAVNGKKSAVIRLHKDFCVTDESETSFWNLSAWGENEGYPAHVSFYNNRLCFSGSEYDPQSLYLSGYNTFNDFSPDTIEGNLDYRKALSVAITDDAMSEIRWFRPMEKGLVVGTDTSLWIVILDFERGFNLVSRRLAGIGVYDAPPLTIRDELLFVQGAGRKIKRLGGASEQGFRFLELTQYVSHLFTYRVKQMVYQEDPNSLLWVLNNNNELLCCSVHEDFKAIGSWHVHKLLGEGIKIVSLSSAVSEDQGETVLWMLVVRTDEHDIKSTHLEKLGDFSLNIGGIN
Physico‐chemical
properties
protein length:582 AA
molecular weight: 65682,12670 Da
isoelectric point:7,60804
aromaticity:0,11168
hydropathy:-0,30155

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAS76274.1
1 582
Domain Start End Length (AA) Confidence
N-terminal 1 579 579 0,9105
Central domain 580 579 1 0,1126
C-terminal 580 582 2 0,8190
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-579
Central
580-579
C-terminal
580-582

Taxonomy

  Name Taxonomy ID Lineage
Phage Liberibacter phage P-V1R1-5
[NCBI] 		3464943 Viruses >
Host Candidatus Liberibacter asiaticus
[NCBI] 		34021 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Rhizobiaceae > Candidatus Liberibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAS76274.1 [NCBI]
Genbank nucleotide accession
PX222957 [NCBI]
CDS location
range 10761 -> 12509
strand -
CDS
ATGGCTAATATAGCTTTTACAAAGCGTTCTTTTGCAGGTGGAGAAGTTTCGCCTCAGGTACTTCAATCGTGTAGTGATCGTGATATTTACGCACAAGGATTGTCGCAGGCTCTTAATACTATTGTGTTATCTGATGGGTCTTTGGTGCGGAGACCTTCAAATCATTGCTACAGTTCACTTCGTATCCCTCCTAAATCCCGTCGGATAATTTCCTTTGCGCTAGGAGGTGATAAGACTGCTTTGTTCGTTTTTGGTCAGAAGAAGATGATGATTGCGACGGTTAATGGAATAAAACCACCGCAATATGTCCGCCCTTATGATACACCCTATCATGCTTATGATGTGGAGCATCTAGATTTTGCCCGTATGGGGGATCTTATCGTTTTAGTTCACTCTCGTTATCCTCCTTATCAAATAGAGTTCACCGCCGATGATGTTATTTTTAAACCGATGGTCTTTGAGCCTCCTCCATGGTTGGGGCGGTGTCAAGTTAATGGGAAAAAGCACGATGCTAAATTGTACATTGATCCCTTACCCTCAACACGTAAAGGGAAAATGACTGTTAAATCTACATCTCCTTTATTTAAGGAAAGTGATGTCGGGCGAATGCTTCGTCTTGGGTGGCTTCCAAAGAATTGGAAAGAAAAGACTTTATATCCTGAGAATGCCTTTATCGAGATGTTTGGCAAGGTCTATCAGAGTATCACAGGCGGAGTATCGGGAGATGAATGGAAAGACAACCCGAGAGATACGTATATTAAAGATGGCAAAGTTACATGGAAAGTTATCGCTTCTTCGCAAGAATTAAGCACTGGTAAGGACGGCAAGCCCATACTTGGCACAGGGGGAAAATACCGAACTCCTTATTATGTTTGGGGGGAAATCGTCGCAGTTAATGGAAAAAAGAGTGCTGTGATCCGCCTTCACAAGGATTTTTGTGTAACTGATGAAAGTGAAACCTCTTTTTGGAATTTGAGTGCATGGGGAGAAAACGAAGGATATCCTGCTCATGTATCTTTTTATAACAATAGGTTGTGTTTTTCTGGTTCTGAGTATGATCCACAGTCACTTTATCTTTCTGGATACAACACTTTTAATGATTTTAGCCCTGATACGATTGAGGGTAACCTTGATTATCGCAAAGCTCTGTCTGTTGCGATAACGGATGACGCTATGTCTGAGATCCGTTGGTTTAGACCGATGGAAAAGGGGCTTGTTGTTGGAACGGATACCTCATTATGGATTGTTATTCTTGATTTTGAGAGAGGTTTTAATCTGGTTTCAAGACGATTAGCAGGGATTGGTGTTTACGATGCTCCTCCTTTGACTATTAGAGATGAGTTGCTTTTTGTGCAAGGGGCGGGACGAAAGATTAAGCGTTTAGGCGGTGCAAGTGAGCAAGGTTTTCGATTTTTAGAACTCACGCAATACGTTAGTCACCTTTTTACCTACCGAGTAAAACAAATGGTTTATCAAGAAGATCCTAATTCTCTTTTATGGGTGCTTAATAATAATAATGAGCTTTTATGCTGTAGTGTTCATGAAGATTTTAAAGCCATTGGATCTTGGCATGTTCATAAACTTTTAGGGGAAGGAATTAAGATTGTTTCTCTTAGTTCTGCTGTAAGCGAGGATCAAGGTGAAACGGTTCTTTGGATGCTGGTCGTTCGAACGGATGAACACGACATCAAAAGCACACACTTAGAGAAACTTGGTGACTTCAGCTTGAATATTGGAGGAATAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f73435de46bb0ba4b9362a958ab9a7fcd683b55ae60c3c82dde416a6bc7747aa
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8671
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50