Protein

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Genbank accession
QBI77673.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,86
Seq2Symm
C3 confidence 0,990
C3 0,990
C1 0,031
I 0,003
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAQIQFFKVATLPGTLQPDSFYFVENGSYSESYLTNGAGVARSIGNSAMINALINEALASLPGTGAPILFVADIAARDALEPEGAIFVLVQDASADPTVESGAALYAWNPATSAWLKVAEYESMDVEINWDAINGRPTSTPAQIDTAVSQAHTHANKSTLDKFSEDGGLVRFGGQPIPAEWNGAAW
Physico‐chemical
properties
protein length:186 AA
molecular weight: 19637,57770 Da
isoelectric point:4,22822
aromaticity:0,09677
hydropathy:-0,00054

Taxonomy

Phage
Pseudomonas phage vB_Pae_CF79a [NCBI] · taxon 2563593
Uroviricota Caudoviricetes Pseudomonas phage vB_Pae_CF79a
Host
Pseudomonas aeruginosa [NCBI] · taxon 287
Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa

Coding sequence (CDS)

Genbank protein accession
QBI77673.1 [NCBI]
Genbank nucleotide accession
MK510971.1 [NCBI]
CDS location
range 39843 -> 40403
strand +
CDS
ATGGCCCAGATTCAATTTTTCAAGGTTGCGACGCTGCCGGGCACACTGCAGCCGGACAGTTTCTACTTCGTCGAGAACGGCAGCTACTCGGAGTCCTACCTGACCAACGGCGCGGGAGTGGCGCGCTCGATCGGCAACAGCGCGATGATCAACGCGCTGATAAACGAGGCGCTGGCCAGCCTGCCCGGCACCGGCGCGCCGATCCTGTTCGTAGCCGATATCGCTGCACGCGATGCCCTGGAGCCTGAGGGTGCAATCTTCGTCCTGGTTCAGGATGCGAGCGCTGACCCGACAGTCGAATCCGGCGCTGCGCTGTACGCATGGAACCCGGCGACCAGCGCATGGCTGAAAGTGGCCGAGTATGAGTCGATGGACGTCGAGATCAACTGGGACGCGATCAACGGGCGCCCGACGTCGACGCCGGCGCAGATCGACACTGCCGTTTCCCAAGCGCACACGCACGCGAACAAGTCGACGCTGGACAAGTTCAGCGAGGATGGCGGCCTGGTTCGGTTCGGCGGGCAGCCGATTCCGGCGGAGTGGAACGGGGCGGCCTGGTAA

Genome Context

Tertiary structure

QBI77673.1
ColabFold structure
Source ColabFold
pLDDT 87.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank