Phage RBP Database

Genbank accession

GENB_a89f2c8c2491 [GenBank]

Protein name

tail spike protein

RBP type

TSP

Evidence DepoScope

Probability 0,66

Seq2Symm

C3 confidence 0,997

C3	0,997
C2	0,000
D3	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MRARHSAAMDTADLARLLENLLRLGTIAEVRHTTPPAVRVRTGGITTTWRPWAERRAGQTRTWNPPTVGEQVLLFCPSGDPANAVILCGIPTADNDVPSNDPNLTVTLYPDGALTSYDHAAGLLSVQGVKTVFLEAAANVLVKAPNTTFDGDVTVKGRFAYENGIAGHGGENGNKITGSLTHEGGQLSSNGVILDKHGHGGVQHGDDWTEGTR

Physico‐chemical properties

protein length:	213 AA
molecular weight:	22536,86170 Da
isoelectric point:	6,03689
aromaticity:	0,05164
hydropathy:	-0,31362

Domain architecture

GENB_a89f2c8c2491

1 213 aa

ATT 20–90 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR037026
ATT

IPR037026

GENB_a89f2c8c2491

1213 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1459
STR

DC_1459

GENB_a89f2c8c2491

1213 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR037026	ATT	IPR037026	20	90	Merged direct domain	Vgr protein, OB-fold domain superfamily	N-terminal	Low	Positional only	16 proteins / 16 hits

Proteins with similar domain architecture

Phage

Ralstonia phage YO140_2 [NCBI] · taxon 2935322

Uroviricota Caudoviricetes Peduoviridae Aresaunavirus Ralstonia phage YO140_2

Host

Ralstonia solanacearum [NCBI] · taxon 305

Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia solanacearum

Genbank protein accession

ON170241.1_CDS_[12586..13227] [NCBI]

Genbank nucleotide accession

ON170241.1 [NCBI]

CDS location

range 12586 -> 13227
strand +

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)