Protein

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Genbank accession
AFU63932.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MATIKQIQFKRTKVAGSRPTAAQLAEGELAINLKDRTIFTKDDLNQIIDLGFAKGGEVSGDITQIGNYTQTGNYNLTGDANVSGKITTNALDVGTISDLRQTNFRPVLSTTAGSNFIISNSGGLIKPITLTVEGTATSSNTILRHTVDTTVAASGFIDSINISLNPADGALVTALNGTVNIGSSLKTPKLSVSGAETILGDYSISIGDNDTGFRWSSDGIFNTVTNGTSIYTHSNGVTYSNRPTAFRYTADADAMTPGVMFDGGYLAVVDTSTDGNAYGDGMSYLGYKDAAGYSFYYRGGGTFNVASKGGFNADTAAAFSKTVDVSGVLTNSAQIRVVGSGTVHVNNDGTVALGKTLTWHPSHASGTDEKARDAITISAWGDAAARINVLETADATGWMSYIQRAGPGSASPTGVESRINGSLQASDLISDNTLRVAGAFTCTRRNSAGWENSAGWYAGATPVVANQGNVQEMDPGVGGFYPGFAQYNYNGTGWNQAFVLGLLGQGVQRWRRGVLALRGDGPVDAGQQIARWYFSQEDGSLESEGPLKAPSVQAGQITSFGVNITNALGSASIAIGDNDTGLRWGGDGIVQIVANNAIVGGWNSTDIFTEAGKHITSNGNINQWGGGAIYCRDLNVSSDRRIKKDIKAFENPVDILSTIGGYTYLIEKGFNEDGSQAYEESAGLIAQEVEAVLPRLVKISNDGTKDVKRLNYNGITALNTAAINVHTKEINELKKQLKELKDIVKFLTK
Physico‐chemical
properties
protein length:749 AA
molecular weight: 78913,52420 Da
isoelectric point:5,31896
aromaticity:0,08011
hydropathy:-0,21308

Domains

Domains [InterPro]
IPR030392
638–698
IPR030392 Coil
IPR030392
638–737
IPR030392
AFU63932.1
1 749
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STML-198
[NCBI] 		1204531 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella
[NCBI] 		590 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFU63932.1 [NCBI]
Genbank nucleotide accession
JX181825.1 [NCBI]
CDS location
range 29659 -> 31908
strand +
CDS
ATGGCTACTATAAAACAAATACAATTTAAAAGAACTAAAGTAGCAGGCTCTCGTCCTACTGCCGCTCAACTCGCTGAAGGCGAACTTGCTATTAACTTAAAAGACCGCACTATTTTCACGAAAGACGATTTGAACCAAATCATTGATTTAGGTTTTGCAAAAGGCGGTGAAGTATCAGGAGATATCACGCAGATTGGTAATTATACCCAAACCGGAAATTATAATCTAACTGGTGATGCTAATGTATCTGGTAAAATTACCACCAACGCATTAGATGTCGGTACTATTTCAGACCTAAGACAAACTAACTTTAGACCTGTATTAAGCACAACAGCGGGTTCTAATTTTATTATATCAAACTCCGGCGGTTTAATCAAACCAATTACTTTGACAGTAGAAGGAACAGCAACAAGCTCAAACACTATTCTTCGTCATACTGTTGATACTACTGTGGCTGCGAGCGGATTTATTGATTCAATTAATATTTCTCTTAATCCCGCTGACGGGGCTCTGGTTACAGCTCTTAATGGTACGGTGAATATCGGTAGTTCCCTTAAAACTCCTAAACTTTCTGTTTCCGGCGCCGAAACTATTTTAGGAGATTATAGCATTTCAATCGGTGACAATGATACTGGGTTCAGATGGTCTTCTGATGGAATATTCAATACAGTAACTAATGGAACTTCGATTTATACCCATTCTAACGGAGTTACTTATTCTAACCGCCCGACAGCATTCAGATATACCGCGGATGCTGATGCGATGACGCCTGGAGTCATGTTTGATGGCGGATATTTAGCTGTGGTAGATACTTCTACCGACGGCAATGCTTATGGCGATGGGATGAGTTATCTTGGTTATAAAGATGCGGCTGGTTACAGTTTTTATTATCGCGGCGGCGGAACTTTTAATGTAGCTTCTAAAGGCGGATTTAATGCAGACACAGCTGCCGCTTTTTCCAAAACTGTGGACGTATCTGGCGTTTTAACTAATAGTGCTCAAATAAGAGTAGTGGGTTCCGGTACTGTTCATGTCAATAATGACGGCACCGTAGCATTAGGTAAAACTTTAACATGGCATCCATCTCATGCTTCCGGAACTGATGAAAAGGCAAGAGACGCTATTACTATTAGTGCTTGGGGCGATGCAGCCGCCCGAATAAACGTTCTAGAAACTGCCGATGCAACGGGCTGGATGTCTTATATTCAACGAGCGGGTCCAGGAAGCGCTTCTCCTACTGGAGTTGAAAGCCGAATTAACGGGTCTCTACAAGCATCTGATTTAATTTCTGATAATACTCTAAGAGTAGCCGGAGCTTTCACTTGCACTAGAAGAAACTCCGCAGGATGGGAAAATAGCGCTGGATGGTATGCTGGAGCAACACCAGTAGTAGCTAACCAAGGAAACGTTCAAGAAATGGATCCAGGTGTAGGAGGCTTTTATCCTGGATTCGCACAATATAACTATAATGGTACTGGATGGAACCAAGCGTTTGTTCTGGGGTTACTAGGCCAAGGTGTTCAGAGATGGCGTCGTGGTGTATTAGCTCTTAGAGGCGATGGCCCTGTTGATGCTGGTCAACAAATTGCTCGTTGGTATTTTAGTCAAGAAGACGGAAGTTTGGAATCGGAAGGCCCACTTAAAGCTCCTAGTGTTCAAGCTGGACAAATAACATCTTTTGGTGTAAACATTACAAACGCGTTAGGCAGTGCGTCTATAGCTATTGGCGATAACGATACCGGATTGCGCTGGGGCGGCGATGGTATCGTTCAAATTGTAGCTAATAACGCTATCGTAGGCGGATGGAATTCAACAGATATTTTTACTGAAGCTGGTAAACATATAACATCCAATGGAAATATAAATCAATGGGGCGGAGGCGCAATTTATTGTAGAGACCTTAATGTTAGTTCCGACAGAAGAATTAAGAAAGACATAAAAGCATTTGAAAATCCCGTAGATATTTTAAGCACTATAGGCGGTTATACTTATCTTATTGAAAAAGGATTTAATGAAGATGGAAGTCAGGCTTACGAAGAGTCCGCTGGATTAATTGCTCAAGAAGTAGAAGCTGTTCTTCCTCGTTTAGTTAAAATATCCAATGATGGAACAAAAGATGTTAAAAGACTTAATTATAATGGTATAACAGCTTTAAATACTGCTGCTATAAATGTACATACTAAAGAAATTAATGAGCTCAAAAAGCAATTAAAAGAGCTTAAAGACATTGTTAAGTTTTTAACTAAATAA

Tertiary structure

PDB ID
61d03cdc6cff02f84d25ff65e33be67ce734010a0a83db6ff82d84f44b0cd3a1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5493
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages quickly and effectively reduce contamination of various foods with Salmonella Woolston,J., Parks,A.R., Hanna,L.F., Charbonneau,D. and Sulakvelidze,A. 2016-07-02 — GenBank