Phage RBP Database

Genbank accession

YP_009008220.1 [GenBank]

Protein name

hypothetical protein

RBP type

TF

Evidence RBPdetect

Probability 0,79

TF

Evidence RBPdetect2

Probability 0,64

Seq2Symm

C3 confidence 0,193

C3	0,193
C2	0,064
C1	0,060

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSQINVTRVSSLQGNNSLAVDSNGTCDVTGNLKIRRWTNSTRPGSPEIGMIGFNTEEESAEVYDGNEWSGFGGSKIDGSSADKAAPSAAAILAVNPAAPDGVYWIALPTVGATQVYCAMGSSHLGGGGWMLAWKCTRGNTFNYDSSYWSQTNVYNATTQLNRNDGDHKNHVFNYYNAATMAAVFPDINNGGQSSVSYNGWTWKQGTGQTCLARLQSQSQLSSNPRGNSMWQGSGFSNQNGFQWYGFNYRGNGSNRVRWGFGWNNEGDQNSNDLTGGIGIQRSSTSAGDHIYCCQGTTGVNRSMRAEIWVQ

Physico‐chemical properties

protein length:	310 AA
molecular weight:	33500,07150 Da
isoelectric point:	6,41146
aromaticity:	0,10968
hydropathy:	-0,60613

Domain architecture

YP_009008220.1

1 310 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

NF040941
Unmapped

NF040941

YP_009008220.1

1310 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0326
STR

DC_0326

YP_009008220.1

1310 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
NF040941	Unmapped	-	87	131	NCBIfam	fibrinogen-like bacterial YCDxxxxGGGW domain	-	-	-	-

Proteins with similar domain architecture

Phage

Synechococcus phage ACG-2014h [NCBI] · taxon 1340810

Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Sedonavirus Sedonavirus tusconh

Host

Synechococcus sp. [NCBI] · taxon 1131

Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp.

Host

Synechococcus sp. WH 7803 [NCBI] · taxon 32051

Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. WH 7803

Genbank protein accession

YP_009008220.1 [NCBI]

Genbank nucleotide accession

NC_023587 [NCBI]

CDS location

range 95821 -> 96753
strand +

CDS

ATGTCGCAGATTAACGTAACTAGGGTCTCATCCTTACAAGGCAATAACTCATTGGCTGTTGATTCCAATGGCACATGTGATGTCACTGGAAATCTTAAGATCAGAAGATGGACTAATAGTACCAGACCAGGAAGTCCTGAGATCGGTATGATTGGATTTAATACTGAGGAGGAGTCCGCAGAAGTTTATGATGGAAATGAGTGGTCTGGTTTTGGTGGATCTAAGATTGATGGATCTTCTGCTGATAAAGCAGCACCATCTGCTGCAGCAATTCTTGCAGTAAACCCAGCAGCACCCGATGGCGTTTACTGGATTGCTCTTCCCACTGTTGGTGCTACTCAAGTTTATTGTGCCATGGGAAGTAGTCACCTAGGTGGCGGTGGTTGGATGCTTGCTTGGAAATGTACTAGAGGAAATACTTTCAACTACGATAGTTCTTACTGGTCACAAACAAACGTTTATAATGCTACTACACAGTTGAATAGAAATGATGGTGACCATAAGAACCATGTTTTCAACTATTATAATGCAGCTACAATGGCTGCTGTTTTCCCAGACATAAACAATGGTGGTCAGTCATCAGTTAGTTATAATGGTTGGACTTGGAAACAAGGCACAGGTCAAACATGTTTAGCTAGACTACAGAGTCAGTCACAACTCAGTAGTAACCCTCGTGGAAACAGCATGTGGCAGGGTTCTGGATTCTCAAACCAAAATGGTTTCCAGTGGTATGGATTTAACTATAGAGGAAACGGTAGTAACAGAGTTCGTTGGGGATTTGGTTGGAATAACGAAGGAGACCAAAATTCCAATGATCTTACTGGTGGCATTGGTATTCAGCGTTCTAGCACATCTGCAGGAGATCATATTTATTGTTGTCAAGGTACAACTGGTGTAAATAGAAGTATGAGAGCGGAGATCTGGGTACAATGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)