Protein

View in Explore
Genbank accession
YP_012791976.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSQQEQTEIQGPFTRSFGGLNLSNSVGALPVSDSPVFHNCDISEDGAVVRRKGTALVNTYNVNNASGKAWAETIRTKLGSEYFILSNEVGILISLMRDDEVVGMPREVAVVAKSSIWTVPPSSMNFIPVNAPYDRLLILTPEHPIVQLSFLERTLTFTCTTNNGGGVFTLTAPISVNDTTLWRDTNASSYIVTDATNNVYPVSVKNPDFSFRLTGAFVVGQTYTLTIRQITWQWWAESMYYEGQDMMQNTSRFNVTSIDQNVKVPDRLITDIDPVYKNSQGIGLYAYWSSRFDTNGYLGPTPSPNTADEYGFSGGGRFTPPSLIPGATLQAAPFYITFGTTYGGSPGPINQVNILRLRELRFNGGTGAIPNDLQVYNDTQQLTWNNVPYLLDNFHTYSVTYNATDRLISFMNLPGDATRVANYFAILGPTNNLPANAPLHISCLSASAYLTGSRRVWYRNLPTTGGVLDGCYVRAYGIGKFVDYSKRSFHAIGTVYRDRLILVNPSTSTDQLLISEIADATVPGEFYQFMQVTDMLLGVTTDPFTLNVTSEGRERITAVTGWQKRLFVFTGSNTYSVEGGEQFGESSYAVNLVSTYGAFNQNCVVVTNLTVLYMNKFGLFDLMNKPNTDSYGAFERSMKIRTLFTDLSGGTEDNLHWVRYNESNNRLYVGLAVKGDTRTTSRNLMLNVTWDSWSTLSSAAPFQMYPAIQLFKYMLWLTNINAPLTVAMLCTDMPFYMDFASTRTHIYPFSFAAGQVNIPVVGDSRGIINLPIPTTPGVNDFNVSNSTKTGKVYARNVGAAGAEVASMRNPMRDYANTLDLLGGNVNASQFGMVLTGGVEPYTVYPTVTYNGVAPNQWTVTWASGLNNRPLPSQNNTCMVGMLYPSVYASPVFDLESLGRLKRLKRLHLQMDTTIVAGTKYNLNTTFTQVSLINTALVGVVSNYNENVVPAVVQYQFDNRYELRQVQELTLPLQGFGCDYQFYVTSVGAEAFKLAAYEFDIQPQRDKRYVRR
Physico‐chemical
properties
protein length:1011 AA
molecular weight: 112149,26810 Da
isoelectric point:5,90429
aromaticity:0,11672
hydropathy:-0,14708

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Leptolyngbya phage LPP-1
[NCBI] 		2996049 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012791976.1 [NCBI]
Genbank nucleotide accession
NC_111528 [NCBI]
CDS location
range 28951 -> 31986
strand -
CDS
ATGAGCCAGCAAGAACAAACAGAAATCCAAGGTCCGTTTACTCGCTCGTTTGGCGGGTTAAACCTTTCAAACTCGGTGGGGGCGCTACCTGTCAGCGACTCACCGGTGTTCCACAACTGTGACATCAGCGAAGATGGCGCGGTAGTGAGACGCAAAGGCACTGCACTAGTCAACACCTACAACGTCAATAATGCTTCCGGTAAGGCGTGGGCAGAAACTATCCGCACCAAGCTGGGAAGCGAGTACTTCATCCTCAGCAATGAAGTGGGGATACTTATCTCGCTCATGCGTGACGATGAAGTAGTGGGGATGCCACGAGAAGTGGCGGTAGTTGCAAAGTCCAGCATCTGGACAGTACCCCCTTCTAGTATGAACTTCATACCGGTCAATGCACCGTATGACCGTTTACTCATCCTTACGCCCGAGCACCCTATCGTCCAGCTTTCATTCTTAGAGCGCACTCTCACGTTTACCTGCACGACTAATAATGGTGGGGGAGTGTTCACACTTACCGCCCCCATCTCGGTTAACGACACCACGCTGTGGAGAGACACTAACGCGTCAAGTTATATCGTGACTGACGCAACTAACAACGTCTACCCAGTGAGCGTTAAGAACCCCGACTTTAGCTTCAGGCTAACCGGGGCTTTTGTCGTGGGGCAGACGTACACTTTGACCATCCGCCAGATTACCTGGCAGTGGTGGGCTGAGTCCATGTACTACGAAGGGCAGGACATGATGCAAAACACCAGTCGCTTCAATGTCACGTCCATCGACCAAAACGTCAAGGTGCCTGACAGACTCATCACTGACATAGACCCAGTGTACAAGAATAGTCAGGGTATCGGGTTGTACGCTTACTGGTCGAGTCGCTTTGATACCAACGGTTACCTCGGACCGACGCCTAGCCCTAACACAGCAGATGAGTACGGGTTCTCTGGCGGGGGGAGATTCACGCCCCCATCTTTAATACCAGGGGCAACGCTTCAAGCAGCACCTTTTTATATAACGTTTGGTACTACGTATGGCGGGTCGCCTGGGCCTATCAACCAGGTTAACATCCTGCGGCTCCGAGAGTTGCGGTTTAACGGGGGGACAGGGGCGATACCCAACGACCTTCAGGTGTACAACGACACTCAGCAGCTTACCTGGAATAACGTTCCCTACCTTTTAGACAACTTTCACACCTACTCAGTGACCTACAATGCGACTGATAGGCTCATCTCATTCATGAACCTACCCGGTGACGCAACACGGGTTGCAAACTACTTTGCCATCCTAGGTCCGACGAACAACCTGCCTGCTAACGCCCCCCTCCATATCTCCTGCCTATCGGCTTCAGCATACCTCACAGGCTCTCGTCGAGTCTGGTATCGTAACTTGCCAACTACGGGTGGGGTATTAGACGGGTGCTACGTTAGAGCATACGGCATCGGCAAGTTCGTTGATTACTCCAAACGTTCGTTTCACGCCATCGGTACAGTTTACCGTGACCGGCTTATCTTAGTCAACCCCTCTACTTCTACCGACCAGTTGCTTATCAGCGAGATAGCAGACGCCACTGTACCTGGTGAGTTCTACCAGTTTATGCAGGTGACAGACATGTTGTTGGGGGTGACGACTGACCCGTTCACTTTGAACGTTACCAGTGAGGGGAGAGAACGCATCACAGCCGTTACTGGCTGGCAGAAGCGTCTCTTTGTCTTTACCGGTAGCAACACTTATTCTGTGGAGGGGGGAGAACAGTTTGGGGAGTCCAGTTATGCAGTCAACCTGGTATCGACCTATGGTGCGTTTAACCAAAACTGTGTGGTAGTGACTAACCTCACCGTGCTGTACATGAACAAGTTTGGGCTGTTCGACTTGATGAACAAACCGAACACCGACAGCTACGGTGCATTTGAGCGTAGCATGAAGATACGCACGCTGTTCACCGACTTGTCAGGTGGCACGGAAGACAACTTGCATTGGGTTCGCTACAACGAGTCTAACAACCGCTTGTATGTGGGGCTGGCAGTTAAAGGCGACACTCGCACGACCAGCCGCAACTTGATGCTTAACGTGACGTGGGACAGTTGGTCAACGCTCTCTAGCGCTGCCCCCTTCCAGATGTACCCTGCCATTCAACTGTTCAAGTACATGCTGTGGCTGACTAACATCAATGCCCCCCTCACAGTTGCCATGCTGTGTACCGACATGCCATTTTACATGGACTTTGCCAGTACCCGTACTCACATCTACCCATTCAGCTTTGCAGCAGGACAGGTAAACATTCCGGTGGTGGGGGACAGTCGCGGCATCATTAACCTCCCTATCCCCACCACACCTGGGGTTAATGACTTCAACGTCAGCAACTCCACCAAGACCGGCAAAGTGTATGCACGCAACGTAGGGGCAGCAGGCGCAGAAGTAGCGTCGATGCGTAACCCAATGCGAGACTACGCCAACACCCTAGATTTATTGGGGGGTAATGTCAACGCCAGCCAATTCGGTATGGTACTTACGGGTGGGGTGGAACCCTACACGGTTTACCCTACCGTTACGTACAATGGGGTAGCCCCCAATCAATGGACTGTGACCTGGGCGTCTGGTTTGAACAACCGCCCCCTCCCTAGCCAGAACAATACCTGTATGGTGGGGATGCTTTACCCTAGCGTGTACGCTTCACCGGTATTCGACCTGGAGTCACTAGGGCGCCTTAAGCGCCTTAAGCGCCTTCACCTTCAGATGGACACAACCATTGTGGCGGGTACCAAGTACAACTTGAACACCACCTTCACGCAGGTCTCACTTATTAATACCGCTTTGGTGGGGGTAGTGTCCAACTACAACGAGAACGTTGTACCAGCGGTCGTGCAGTACCAGTTTGACAACCGTTACGAGTTGCGCCAGGTGCAAGAGTTGACCCTCCCTCTTCAGGGATTTGGGTGTGACTACCAGTTTTACGTTACTAGTGTGGGGGCAGAAGCTTTCAAGCTAGCTGCCTATGAGTTTGACATTCAACCCCAACGCGACAAACGCTACGTCAGGAGATAA

Tertiary structure

PDB ID
32cf6dc7fe25592b3e8a260e8739bd3a22ec7d910ec0567b7cfbd29cbd89cc66
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2265
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing the genomes of LPP-1, the first isolated cyanophage, and its relative LPP-2 reveal different integration mechanisms in closely related phages Shaalan,H., Cattan-Tsaushu,E., Li,K. and Avrani,S. 2023 — GenBank