Protein

View in Explore
Genbank accession
YP_010659092.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Seq2Symm
C3 confidence 0,996
C3 0,996
C1 0,027
D3 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MVDTCNINGVCGTGDWNGPKPGDPNMNDLLLKATPAFGGIDIEFTWPTTNPGAVGTTRLFRSTDANFAGATIRAFVNGNFYFDKTDPGSKVDQRYYYWIQLVSINGTDGDIIGPASATARPLIEQMIEQLTGEIDNGLLSQELRQEIAQIELNKLGITKEEIERAKNDDALGVRLTQIDAKMDQNTAILQEEVRARVTADSSLVQTVNTMYADFNGNIAAIQQENTVLATKVNALASSVTTINATVNGDSASGKVGLVAEVQTLDGKVTQIGARWTATVDVNGLVGGFGVYNDGRTVEAGFNVDRFWIGRPGTPKNPGSYPFIIDNNIVYIKEAAIQKLTFDKLRAQDGSFIVQNGKIQADYIEAKDIVVNNIQSDNYQPGTQGWAFRPNGIMEINGTAGTGRMTINNATIKVFDQAGKLRVHIGNLQA
Physico‐chemical
properties
protein length:429 AA
molecular weight: 46377,45130 Da
isoelectric point:4,80400
aromaticity:0,07459
hydropathy:-0,25268

Domains

View on InterPro
Domain architecture
YP_010659092.1
1 429 aa
STR 31–117 · RBD 261–408 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pseudomonas phage PAP02 [NCBI] · taxon 2713224
Uroviricota Caudoviricetes Schitoviridae Litunavirus Litunavirus Pap02
Host
Pseudomonas aeruginosa [NCBI] · taxon 287
Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa

Coding sequence (CDS)

Genbank protein accession
YP_010659092.1 [NCBI]
Genbank nucleotide accession
NC_070864.1 [NCBI]
CDS location
range 25404 -> 26693
strand -
CDS
ATGGTAGACACTTGCAACATCAATGGGGTCTGCGGAACCGGGGACTGGAATGGTCCTAAGCCCGGTGACCCCAACATGAATGATCTGCTGCTGAAGGCAACTCCTGCCTTCGGTGGTATCGACATTGAGTTCACTTGGCCAACTACGAACCCAGGTGCAGTTGGCACTACTCGACTGTTCCGAAGCACTGATGCGAACTTCGCTGGTGCAACTATCCGTGCCTTCGTCAATGGTAACTTCTACTTCGACAAGACAGACCCTGGCTCCAAGGTAGATCAACGTTACTACTACTGGATTCAGTTGGTTTCGATCAACGGCACTGATGGGGACATCATTGGTCCAGCTTCGGCTACTGCACGTCCGCTCATCGAGCAGATGATTGAGCAGCTTACTGGTGAGATCGACAACGGGTTGTTGTCACAAGAACTGAGGCAAGAGATTGCTCAGATCGAACTGAACAAACTGGGTATCACCAAGGAAGAGATTGAACGAGCCAAGAACGATGATGCTCTTGGTGTTCGTCTCACTCAGATCGATGCAAAGATGGATCAGAATACTGCCATCTTGCAGGAAGAGGTTCGTGCTCGTGTGACTGCTGACAGTTCTCTGGTTCAGACAGTCAACACTATGTACGCAGACTTCAACGGGAACATCGCAGCAATCCAGCAAGAGAACACTGTGCTGGCTACCAAGGTGAACGCCTTGGCTTCGTCTGTGACCACCATCAACGCCACGGTCAACGGTGACTCAGCCTCTGGTAAGGTTGGATTGGTTGCTGAAGTCCAGACCTTGGATGGCAAGGTTACCCAGATCGGTGCTCGCTGGACTGCGACTGTTGATGTGAATGGTTTGGTTGGTGGCTTCGGTGTGTACAACGATGGACGGACTGTTGAAGCTGGCTTCAACGTAGACCGCTTCTGGATCGGTCGTCCTGGTACTCCGAAGAACCCAGGCAGCTACCCGTTCATCATCGACAACAACATCGTCTACATCAAGGAAGCTGCCATCCAGAAGTTGACCTTCGACAAGCTCAGGGCACAGGATGGAAGCTTCATTGTTCAGAACGGTAAGATCCAGGCTGACTACATCGAAGCCAAGGATATCGTGGTGAACAACATCCAATCGGACAACTACCAGCCAGGTACCCAAGGCTGGGCATTCCGCCCGAATGGGATCATGGAAATCAACGGTACGGCAGGCACTGGCCGTATGACTATCAACAACGCCACCATCAAGGTGTTTGACCAAGCAGGCAAACTCCGGGTGCACATTGGGAACCTACAAGCATGA

Genome Context

Tertiary structure

YP_010659092.1
ESMFold structure
Source ESMFold
pLDDT 78.3
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Characterization and genomic study of Pseudomonas aeruginosa phage PAP02 Lee,J.-H. and Jeong,H.-J. 2021-09-27 — GenBank