Protein

View in Explore
Genbank accession
YP_010301892.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,84
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLIKVKTGLIQAGSSSTPTAIRAQSGVLSIDPSDEQVPSEVTSDSSFDATSGILTLKFANGQTVKVGGFPTAADIPEGRQGGRGETGADGKDGRDGRDGNPGEPGCTGPVGPDGEQGIPGPDGRDGLPGPVGPTGPDGRTGPMGPTGPTGPRGGTGPTGATGSTGPTGPTGPAGPAGRLSIIVSATNPGNVAAGTIWVDPTKDQNITWP
Physico‐chemical
properties
protein length:210 AA
molecular weight: 20385,04930 Da
isoelectric point:4,58562
aromaticity:0,02381
hydropathy:-0,51905

Domains

Domains [InterPro]
PTHR24637
61–179
PTHR24637
IPR008160
78–131
IPR008160
YP_010301892.1
1 210
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_33
[NCBI] 		2869556 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010301892.1 [NCBI]
Genbank nucleotide accession
NC_061447 [NCBI]
CDS location
range 72124 -> 72756
strand -
CDS
ATGAGTCTGATTAAAGTTAAGACCGGTCTCATTCAGGCTGGTTCTTCGTCTACGCCTACTGCGATTCGTGCTCAGTCTGGGGTTCTCTCGATAGACCCTAGCGACGAACAGGTTCCCTCAGAGGTAACTTCCGATTCGTCGTTCGATGCAACTTCGGGTATTCTTACTCTCAAGTTTGCTAACGGGCAGACAGTTAAGGTAGGCGGCTTCCCTACTGCTGCTGATATACCTGAAGGTCGTCAGGGCGGTAGAGGTGAGACAGGTGCTGATGGTAAAGACGGACGAGATGGCCGCGATGGTAATCCAGGTGAGCCTGGGTGTACTGGTCCTGTGGGTCCAGATGGTGAGCAGGGTATCCCAGGACCAGATGGCCGTGACGGATTACCAGGCCCTGTTGGTCCTACTGGCCCAGATGGTAGAACAGGCCCTATGGGTCCTACTGGTCCTACTGGCCCTCGTGGCGGTACTGGTCCTACAGGCGCTACTGGTTCTACTGGACCGACTGGTCCTACCGGCCCTGCAGGTCCTGCTGGACGCCTGTCTATCATCGTCAGTGCTACTAACCCAGGGAACGTTGCTGCTGGCACAATCTGGGTGGACCCTACCAAAGATCAGAATATCACATGGCCATAA

Tertiary structure

PDB ID
5044e9408616eedbb0b561bd00986a13e97f83a83467f2f9250abeef6484ec70
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7176
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_33 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank