Protein

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Genbank accession
XQO94814.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNVTSYITAQYTDANMLSVTIIGGKHEIIMRDSPAWYELELDTLEARNDILPWDYAEESQTEPSEPPWRAIYTSPSNFSVKIFGSVNYACVKPYDKLWTTLGLDKLTEDGLVLPHDHFSVEEPDPTQEDIIELNRRSAKNLRDTLINARLIEVDGLVWQVDPIDREKIILAIETGKRNGIESRIWTLADDTRRMTTVQELERVIDAWAFRMGDIHDRYESWRNDTDMLTPFK
Physico‐chemical
properties
protein length:233 AA
molecular weight: 26995,01100 Da
isoelectric point:4,60222
aromaticity:0,09013
hydropathy:-0,50043

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPALA
[NCBI] 		3400948 Viruses > unclassified bacterial viruses >
Host Vibrio anguillarum ALA
[NCBI] 		1416571 Arthropoda > Malacostraca > Decapoda > Mithracidae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQO94814.1 [NCBI]
Genbank nucleotide accession
PV171464.1 [NCBI]
CDS location
range 100404 -> 101105
strand +
CDS
ATGAGCAACGTTACGAGTTACATCACGGCACAGTATACTGACGCGAATATGTTGAGCGTTACCATAATCGGCGGAAAACATGAAATTATAATGCGCGACTCTCCAGCTTGGTATGAATTGGAGCTAGACACGTTAGAAGCCCGGAATGATATACTCCCTTGGGATTACGCTGAAGAATCACAAACTGAACCTTCTGAGCCACCATGGAGAGCGATCTACACATCACCTTCTAATTTCTCAGTGAAAATTTTCGGTTCAGTGAATTATGCTTGCGTTAAGCCATACGATAAACTGTGGACCACACTCGGCTTAGATAAACTCACCGAAGATGGTCTCGTTTTACCACATGATCATTTTTCAGTTGAAGAACCAGATCCGACGCAAGAAGATATCATTGAGCTAAACAGGCGTTCAGCTAAGAATCTCCGAGACACTTTAATAAATGCTCGGTTGATTGAGGTGGATGGTCTGGTTTGGCAGGTCGACCCCATTGATAGGGAGAAGATCATTCTTGCGATTGAGACTGGAAAGAGGAACGGCATTGAAAGCCGGATCTGGACTCTGGCCGATGATACTCGCAGGATGACAACAGTTCAAGAACTAGAACGAGTGATTGATGCTTGGGCGTTCCGAATGGGTGATATCCACGATCGTTATGAGTCGTGGCGAAACGATACAGATATGTTAACACCGTTTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cbca244a53cc9ab99402478c390e6bf35ff428d0b6fdc6941107fe1a0730fa86
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6155
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Vibrio anguillarum phage VPALA Altinok,I., Ture,M., Cebeci,A., Ozturk,R.C. and Ustaoglu,D. 2015-10 — GenBank