Protein

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Genbank accession
XNX38431.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANCSDYISADDLKTGKQAVQHIEHVAKSKDANGAHALTVTDTIRGEQVTNLTLDGMETQFQDAQADKEARFQQFLLNSGYQFLGDYENGPYTIAARNQIIRYQNEFWRLNAATTPPYTTTGTNSTSWATDVTHMVSVGDANLRQELASVNGAMMVGGLSSVTASSFGFTGSGNEAALATTFLNYCIDNNKLAVIDINVNWDGLVFSRGGVNLTGQGVISGFVVIKGDILKTRTNSVTVGTVNDYTTYAVGTTTFPGNFSAYSPGDKIVIELAADTAFNGSINQIGIHFSTVVSADSSQLVIADGLRFAFDKFVISKTTFVKYSGTLAVGTTTITGDFSAFSAGDVVRFENITGTDSVNSGTVYFEHSRVKSASASQLVLEDPLVTAFGDPFIVPAAFLNKLNILNANFDVLQLRAITSLQVKGCRFNRSINDYSYAGNFGDCIVTASTPSAMNFTYARRMTIDNIVTSGATGTTDNAAFKMMSPIECTVDGVVATDYGISSGSQSINGFYVDFLFTPYYNWGRNVHFSGISTGKDRGGLGIWLDGIKGGSLSNSHGGADSRLYELVNFTAEMTCDFGVFIRNPIRSKMTVDANFIQVTGPQYLDLIPTVRKADDKNAGRCISIAGSASGPWAVTVGNDVRIIDGVNYSTVSTDTTLYFQNINNLDVLNLKDFPGLAYSVNTSTSNVSGRICIGPHDLKNAINIGSYSGPYKIESDLAIGTKSSTQPAYDRRRIQWGQDWLFRSSVGILFKMGVEPASATDGYIISMKVPVPATATSGGQAGQWASDGSYLYVCTATNTWRRVAVATW
Physico‐chemical
properties
protein length:808 AA
molecular weight: 86761,95530 Da
isoelectric point:5,32760
aromaticity:0,10272
hydropathy:-0,05507

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNX38431.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9947
Central domain 177 714 539 0,9767
C-terminal 715 808 93 0,9448
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-714
C-terminal
715-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PDP46
[NCBI] 		3388589 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNX38431.1 [NCBI]
Genbank nucleotide accession
PQ783785.1 [NCBI]
CDS location
range 33497 -> 35923
strand -
CDS
ATGGCTAACTGCAGTGATTATATCAGTGCTGACGACCTTAAAACAGGTAAACAAGCAGTCCAGCACATAGAACATGTGGCTAAAAGTAAAGATGCTAACGGTGCACATGCGTTAACTGTAACTGATACCATTCGCGGTGAGCAAGTAACGAACTTGACACTTGATGGTATGGAGACTCAGTTTCAGGATGCTCAGGCTGATAAAGAAGCACGTTTTCAGCAATTCCTTTTAAATTCTGGGTATCAGTTCCTGGGAGATTATGAAAACGGACCATACACAATTGCAGCTCGTAACCAGATTATCCGTTATCAGAATGAATTCTGGCGATTAAACGCGGCCACAACTCCACCATACACAACCACGGGTACAAATAGTACATCGTGGGCAACTGATGTTACTCATATGGTGAGTGTTGGTGATGCTAATTTACGCCAGGAACTGGCATCAGTAAACGGTGCTATGATGGTTGGCGGGTTATCGTCTGTTACAGCGTCATCTTTTGGCTTTACAGGTTCTGGAAACGAGGCTGCATTAGCGACCACTTTTTTAAATTACTGCATTGATAACAATAAATTAGCTGTGATTGATATCAACGTTAATTGGGATGGTCTTGTATTCTCCAGGGGAGGAGTTAACCTAACCGGGCAAGGTGTTATTAGCGGTTTTGTTGTCATAAAAGGCGATATATTAAAAACTCGTACTAATTCTGTAACTGTTGGTACTGTTAATGATTATACAACTTATGCTGTAGGTACTACAACTTTTCCTGGTAATTTTTCTGCGTATAGTCCCGGTGATAAGATTGTAATTGAACTAGCCGCAGATACCGCATTCAATGGTAGTATAAATCAGATTGGTATACATTTCTCAACTGTAGTTTCAGCTGACTCTTCACAATTGGTTATCGCCGATGGGCTACGTTTTGCCTTTGATAAATTTGTGATTAGTAAAACTACTTTTGTAAAATACTCTGGCACCCTGGCGGTAGGGACGACAACTATCACCGGCGATTTCAGCGCATTTTCAGCTGGTGACGTTGTACGCTTCGAAAACATTACCGGAACAGACTCCGTTAACTCCGGGACCGTCTATTTTGAACATTCCCGGGTTAAATCCGCCAGCGCTTCCCAGCTCGTTTTAGAGGACCCTCTGGTTACCGCCTTTGGCGATCCGTTTATCGTACCCGCCGCGTTCCTTAATAAACTTAATATTCTGAATGCGAATTTTGACGTTTTACAGCTCAGGGCGATAACGTCGCTGCAGGTGAAAGGCTGCCGGTTTAATCGAAGCATTAACGATTACTCTTACGCAGGTAACTTCGGGGACTGTATCGTTACGGCATCCACTCCGAGCGCGATGAACTTCACTTATGCTCGCAGGATGACGATTGACAATATCGTAACGTCTGGCGCTACCGGCACAACGGACAACGCCGCATTTAAGATGATGAGTCCTATCGAGTGTACGGTTGATGGCGTGGTCGCCACCGACTACGGGATCTCTTCAGGGTCACAATCCATTAACGGCTTCTATGTAGACTTCCTCTTCACCCCATATTACAACTGGGGCCGTAATGTGCATTTCTCCGGGATAAGCACAGGGAAGGACCGTGGCGGTCTGGGGATCTGGCTTGATGGTATTAAAGGCGGTTCGTTATCAAACTCACACGGCGGCGCGGATAGCCGTTTGTATGAACTTGTTAATTTTACTGCCGAAATGACTTGCGACTTTGGTGTTTTTATTCGAAACCCTATCCGGTCGAAAATGACCGTAGACGCAAATTTCATACAGGTAACCGGGCCTCAGTATCTGGACCTCATTCCCACGGTCCGCAAAGCCGACGATAAAAACGCGGGGCGGTGTATTAGTATTGCGGGGTCGGCATCAGGCCCGTGGGCGGTAACGGTCGGCAACGACGTGCGGATTATTGATGGCGTTAACTATTCAACCGTCTCGACGGATACAACACTGTATTTTCAGAACATCAACAATCTTGATGTCTTAAACCTTAAAGACTTTCCCGGACTTGCTTATTCCGTTAACACGTCGACTTCCAACGTTTCTGGTCGCATTTGTATCGGCCCGCACGACCTTAAAAACGCAATTAACATTGGCAGCTATTCCGGTCCGTATAAAATAGAGAGCGATCTTGCTATTGGAACAAAGTCATCGACACAGCCAGCATACGACAGACGTAGAATTCAGTGGGGGCAAGATTGGCTCTTCCGTAGTTCAGTTGGTATACTTTTTAAAATGGGTGTTGAACCAGCATCAGCGACAGATGGGTATATTATATCTATGAAGGTGCCAGTTCCAGCCACTGCAACATCTGGTGGGCAGGCTGGGCAATGGGCGTCAGATGGCTCCTATCTTTATGTTTGCACAGCAACTAACACATGGCGTCGTGTTGCTGTCGCTACTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd2b4cdd5741d520ca480e3f9af2abc86bd6b339847bfe0cba6ee90cd32a4eaf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7208
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a Plasmid-Dependent DNA Phage with Potential for Targeted Gut Microbiota Modulation Jung,G., Kim,J. and Shin,H. 2025-06-04 — GenBank