Protein

View in Explore
Genbank accession
XNX38431.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,98
Protein sequence
MANCSDYISADDLKTGKQAVQHIEHVAKSKDANGAHALTVTDTIRGEQVTNLTLDGMETQFQDAQADKEARFQQFLLNSGYQFLGDYENGPYTIAARNQIIRYQNEFWRLNAATTPPYTTTGTNSTSWATDVTHMVSVGDANLRQELASVNGAMMVGGLSSVTASSFGFTGSGNEAALATTFLNYCIDNNKLAVIDINVNWDGLVFSRGGVNLTGQGVISGFVVIKGDILKTRTNSVTVGTVNDYTTYAVGTTTFPGNFSAYSPGDKIVIELAADTAFNGSINQIGIHFSTVVSADSSQLVIADGLRFAFDKFVISKTTFVKYSGTLAVGTTTITGDFSAFSAGDVVRFENITGTDSVNSGTVYFEHSRVKSASASQLVLEDPLVTAFGDPFIVPAAFLNKLNILNANFDVLQLRAITSLQVKGCRFNRSINDYSYAGNFGDCIVTASTPSAMNFTYARRMTIDNIVTSGATGTTDNAAFKMMSPIECTVDGVVATDYGISSGSQSINGFYVDFLFTPYYNWGRNVHFSGISTGKDRGGLGIWLDGIKGGSLSNSHGGADSRLYELVNFTAEMTCDFGVFIRNPIRSKMTVDANFIQVTGPQYLDLIPTVRKADDKNAGRCISIAGSASGPWAVTVGNDVRIIDGVNYSTVSTDTTLYFQNINNLDVLNLKDFPGLAYSVNTSTSNVSGRICIGPHDLKNAINIGSYSGPYKIESDLAIGTKSSTQPAYDRRRIQWGQDWLFRSSVGILFKMGVEPASATDGYIISMKVPVPATATSGGQAGQWASDGSYLYVCTATNTWRRVAVATW
Physico‐chemical
properties
protein length:808 AA
molecular weight: 86761,95530 Da
isoelectric point:5,32760
aromaticity:0,10272
hydropathy:-0,05507

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XNX38431.1
1 808 aa
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9947
Central domain 177 714 539 0,9767
C-terminal 715 808 93 0,9448
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage PDP46 [NCBI] · taxon 3388589
Viruses
Host
Escherichia coli [NCBI] · taxon 562
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
XNX38431.1 [NCBI]
Genbank nucleotide accession
PQ783785.1 [NCBI]
CDS location
range 33497 -> 35923
strand -
CDS
ATGGCTAACTGCAGTGATTATATCAGTGCTGACGACCTTAAAACAGGTAAACAAGCAGTCCAGCACATAGAACATGTGGCTAAAAGTAAAGATGCTAACGGTGCACATGCGTTAACTGTAACTGATACCATTCGCGGTGAGCAAGTAACGAACTTGACACTTGATGGTATGGAGACTCAGTTTCAGGATGCTCAGGCTGATAAAGAAGCACGTTTTCAGCAATTCCTTTTAAATTCTGGGTATCAGTTCCTGGGAGATTATGAAAACGGACCATACACAATTGCAGCTCGTAACCAGATTATCCGTTATCAGAATGAATTCTGGCGATTAAACGCGGCCACAACTCCACCATACACAACCACGGGTACAAATAGTACATCGTGGGCAACTGATGTTACTCATATGGTGAGTGTTGGTGATGCTAATTTACGCCAGGAACTGGCATCAGTAAACGGTGCTATGATGGTTGGCGGGTTATCGTCTGTTACAGCGTCATCTTTTGGCTTTACAGGTTCTGGAAACGAGGCTGCATTAGCGACCACTTTTTTAAATTACTGCATTGATAACAATAAATTAGCTGTGATTGATATCAACGTTAATTGGGATGGTCTTGTATTCTCCAGGGGAGGAGTTAACCTAACCGGGCAAGGTGTTATTAGCGGTTTTGTTGTCATAAAAGGCGATATATTAAAAACTCGTACTAATTCTGTAACTGTTGGTACTGTTAATGATTATACAACTTATGCTGTAGGTACTACAACTTTTCCTGGTAATTTTTCTGCGTATAGTCCCGGTGATAAGATTGTAATTGAACTAGCCGCAGATACCGCATTCAATGGTAGTATAAATCAGATTGGTATACATTTCTCAACTGTAGTTTCAGCTGACTCTTCACAATTGGTTATCGCCGATGGGCTACGTTTTGCCTTTGATAAATTTGTGATTAGTAAAACTACTTTTGTAAAATACTCTGGCACCCTGGCGGTAGGGACGACAACTATCACCGGCGATTTCAGCGCATTTTCAGCTGGTGACGTTGTACGCTTCGAAAACATTACCGGAACAGACTCCGTTAACTCCGGGACCGTCTATTTTGAACATTCCCGGGTTAAATCCGCCAGCGCTTCCCAGCTCGTTTTAGAGGACCCTCTGGTTACCGCCTTTGGCGATCCGTTTATCGTACCCGCCGCGTTCCTTAATAAACTTAATATTCTGAATGCGAATTTTGACGTTTTACAGCTCAGGGCGATAACGTCGCTGCAGGTGAAAGGCTGCCGGTTTAATCGAAGCATTAACGATTACTCTTACGCAGGTAACTTCGGGGACTGTATCGTTACGGCATCCACTCCGAGCGCGATGAACTTCACTTATGCTCGCAGGATGACGATTGACAATATCGTAACGTCTGGCGCTACCGGCACAACGGACAACGCCGCATTTAAGATGATGAGTCCTATCGAGTGTACGGTTGATGGCGTGGTCGCCACCGACTACGGGATCTCTTCAGGGTCACAATCCATTAACGGCTTCTATGTAGACTTCCTCTTCACCCCATATTACAACTGGGGCCGTAATGTGCATTTCTCCGGGATAAGCACAGGGAAGGACCGTGGCGGTCTGGGGATCTGGCTTGATGGTATTAAAGGCGGTTCGTTATCAAACTCACACGGCGGCGCGGATAGCCGTTTGTATGAACTTGTTAATTTTACTGCCGAAATGACTTGCGACTTTGGTGTTTTTATTCGAAACCCTATCCGGTCGAAAATGACCGTAGACGCAAATTTCATACAGGTAACCGGGCCTCAGTATCTGGACCTCATTCCCACGGTCCGCAAAGCCGACGATAAAAACGCGGGGCGGTGTATTAGTATTGCGGGGTCGGCATCAGGCCCGTGGGCGGTAACGGTCGGCAACGACGTGCGGATTATTGATGGCGTTAACTATTCAACCGTCTCGACGGATACAACACTGTATTTTCAGAACATCAACAATCTTGATGTCTTAAACCTTAAAGACTTTCCCGGACTTGCTTATTCCGTTAACACGTCGACTTCCAACGTTTCTGGTCGCATTTGTATCGGCCCGCACGACCTTAAAAACGCAATTAACATTGGCAGCTATTCCGGTCCGTATAAAATAGAGAGCGATCTTGCTATTGGAACAAAGTCATCGACACAGCCAGCATACGACAGACGTAGAATTCAGTGGGGGCAAGATTGGCTCTTCCGTAGTTCAGTTGGTATACTTTTTAAAATGGGTGTTGAACCAGCATCAGCGACAGATGGGTATATTATATCTATGAAGGTGCCAGTTCCAGCCACTGCAACATCTGGTGGGCAGGCTGGGCAATGGGCGTCAGATGGCTCCTATCTTTATGTTTGCACAGCAACTAACACATGGCGTCGTGTTGCTGTCGCTACTTGGTAA

Genome Context

Tertiary structure

XNX38431.1
ESMFold structure
Source ESMFold
pLDDT 72.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation of a Plasmid-Dependent DNA Phage with Potential for Targeted Gut Microbiota Modulation Jung,G., Kim,J. and Shin,H. 2025-06-04 — GenBank