Protein

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Genbank accession
XNX38431.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,98
Seq2Symm
C3 confidence 0,998
C3 0,998
C1 0,021
C5 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MANCSDYISADDLKTGKQAVQHIEHVAKSKDANGAHALTVTDTIRGEQVTNLTLDGMETQFQDAQADKEARFQQFLLNSGYQFLGDYENGPYTIAARNQIIRYQNEFWRLNAATTPPYTTTGTNSTSWATDVTHMVSVGDANLRQELASVNGAMMVGGLSSVTASSFGFTGSGNEAALATTFLNYCIDNNKLAVIDINVNWDGLVFSRGGVNLTGQGVISGFVVIKGDILKTRTNSVTVGTVNDYTTYAVGTTTFPGNFSAYSPGDKIVIELAADTAFNGSINQIGIHFSTVVSADSSQLVIADGLRFAFDKFVISKTTFVKYSGTLAVGTTTITGDFSAFSAGDVVRFENITGTDSVNSGTVYFEHSRVKSASASQLVLEDPLVTAFGDPFIVPAAFLNKLNILNANFDVLQLRAITSLQVKGCRFNRSINDYSYAGNFGDCIVTASTPSAMNFTYARRMTIDNIVTSGATGTTDNAAFKMMSPIECTVDGVVATDYGISSGSQSINGFYVDFLFTPYYNWGRNVHFSGISTGKDRGGLGIWLDGIKGGSLSNSHGGADSRLYELVNFTAEMTCDFGVFIRNPIRSKMTVDANFIQVTGPQYLDLIPTVRKADDKNAGRCISIAGSASGPWAVTVGNDVRIIDGVNYSTVSTDTTLYFQNINNLDVLNLKDFPGLAYSVNTSTSNVSGRICIGPHDLKNAINIGSYSGPYKIESDLAIGTKSSTQPAYDRRRIQWGQDWLFRSSVGILFKMGVEPASATDGYIISMKVPVPATATSGGQAGQWASDGSYLYVCTATNTWRRVAVATW
Physico‐chemical
properties
protein length:808 AA
molecular weight: 86761,95530 Da
isoelectric point:5,32760
aromaticity:0,10272
hydropathy:-0,05507

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XNX38431.1
1 808 aa
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9947
Central domain 177 714 539 0,9767
C-terminal 715 808 93 0,9448
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Escherichia phage PDP46 [NCBI] · taxon 3388589
Escherichia phage PDP46
Host
Escherichia coli [NCBI] · taxon 562
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli

Coding sequence (CDS)

Genbank protein accession
XNX38431.1 [NCBI]
Genbank nucleotide accession
PQ783785.1 [NCBI]
CDS location
range 33497 -> 35923
strand -
CDS
ATGGCTAACTGCAGTGATTATATCAGTGCTGACGACCTTAAAACAGGTAAACAAGCAGTCCAGCACATAGAACATGTGGCTAAAAGTAAAGATGCTAACGGTGCACATGCGTTAACTGTAACTGATACCATTCGCGGTGAGCAAGTAACGAACTTGACACTTGATGGTATGGAGACTCAGTTTCAGGATGCTCAGGCTGATAAAGAAGCACGTTTTCAGCAATTCCTTTTAAATTCTGGGTATCAGTTCCTGGGAGATTATGAAAACGGACCATACACAATTGCAGCTCGTAACCAGATTATCCGTTATCAGAATGAATTCTGGCGATTAAACGCGGCCACAACTCCACCATACACAACCACGGGTACAAATAGTACATCGTGGGCAACTGATGTTACTCATATGGTGAGTGTTGGTGATGCTAATTTACGCCAGGAACTGGCATCAGTAAACGGTGCTATGATGGTTGGCGGGTTATCGTCTGTTACAGCGTCATCTTTTGGCTTTACAGGTTCTGGAAACGAGGCTGCATTAGCGACCACTTTTTTAAATTACTGCATTGATAACAATAAATTAGCTGTGATTGATATCAACGTTAATTGGGATGGTCTTGTATTCTCCAGGGGAGGAGTTAACCTAACCGGGCAAGGTGTTATTAGCGGTTTTGTTGTCATAAAAGGCGATATATTAAAAACTCGTACTAATTCTGTAACTGTTGGTACTGTTAATGATTATACAACTTATGCTGTAGGTACTACAACTTTTCCTGGTAATTTTTCTGCGTATAGTCCCGGTGATAAGATTGTAATTGAACTAGCCGCAGATACCGCATTCAATGGTAGTATAAATCAGATTGGTATACATTTCTCAACTGTAGTTTCAGCTGACTCTTCACAATTGGTTATCGCCGATGGGCTACGTTTTGCCTTTGATAAATTTGTGATTAGTAAAACTACTTTTGTAAAATACTCTGGCACCCTGGCGGTAGGGACGACAACTATCACCGGCGATTTCAGCGCATTTTCAGCTGGTGACGTTGTACGCTTCGAAAACATTACCGGAACAGACTCCGTTAACTCCGGGACCGTCTATTTTGAACATTCCCGGGTTAAATCCGCCAGCGCTTCCCAGCTCGTTTTAGAGGACCCTCTGGTTACCGCCTTTGGCGATCCGTTTATCGTACCCGCCGCGTTCCTTAATAAACTTAATATTCTGAATGCGAATTTTGACGTTTTACAGCTCAGGGCGATAACGTCGCTGCAGGTGAAAGGCTGCCGGTTTAATCGAAGCATTAACGATTACTCTTACGCAGGTAACTTCGGGGACTGTATCGTTACGGCATCCACTCCGAGCGCGATGAACTTCACTTATGCTCGCAGGATGACGATTGACAATATCGTAACGTCTGGCGCTACCGGCACAACGGACAACGCCGCATTTAAGATGATGAGTCCTATCGAGTGTACGGTTGATGGCGTGGTCGCCACCGACTACGGGATCTCTTCAGGGTCACAATCCATTAACGGCTTCTATGTAGACTTCCTCTTCACCCCATATTACAACTGGGGCCGTAATGTGCATTTCTCCGGGATAAGCACAGGGAAGGACCGTGGCGGTCTGGGGATCTGGCTTGATGGTATTAAAGGCGGTTCGTTATCAAACTCACACGGCGGCGCGGATAGCCGTTTGTATGAACTTGTTAATTTTACTGCCGAAATGACTTGCGACTTTGGTGTTTTTATTCGAAACCCTATCCGGTCGAAAATGACCGTAGACGCAAATTTCATACAGGTAACCGGGCCTCAGTATCTGGACCTCATTCCCACGGTCCGCAAAGCCGACGATAAAAACGCGGGGCGGTGTATTAGTATTGCGGGGTCGGCATCAGGCCCGTGGGCGGTAACGGTCGGCAACGACGTGCGGATTATTGATGGCGTTAACTATTCAACCGTCTCGACGGATACAACACTGTATTTTCAGAACATCAACAATCTTGATGTCTTAAACCTTAAAGACTTTCCCGGACTTGCTTATTCCGTTAACACGTCGACTTCCAACGTTTCTGGTCGCATTTGTATCGGCCCGCACGACCTTAAAAACGCAATTAACATTGGCAGCTATTCCGGTCCGTATAAAATAGAGAGCGATCTTGCTATTGGAACAAAGTCATCGACACAGCCAGCATACGACAGACGTAGAATTCAGTGGGGGCAAGATTGGCTCTTCCGTAGTTCAGTTGGTATACTTTTTAAAATGGGTGTTGAACCAGCATCAGCGACAGATGGGTATATTATATCTATGAAGGTGCCAGTTCCAGCCACTGCAACATCTGGTGGGCAGGCTGGGCAATGGGCGTCAGATGGCTCCTATCTTTATGTTTGCACAGCAACTAACACATGGCGTCGTGTTGCTGTCGCTACTTGGTAA

Genome Context

Tertiary structure

XNX38431.1
ESMFold structure
Source ESMFold
pLDDT 72.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation of a Plasmid-Dependent DNA Phage with Potential for Targeted Gut Microbiota Modulation Jung,G., Kim,J. and Shin,H. 2025-06-04 — GenBank