Protein

View in Explore
Genbank accession
XNX38431.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANCSDYISADDLKTGKQAVQHIEHVAKSKDANGAHALTVTDTIRGEQVTNLTLDGMETQFQDAQADKEARFQQFLLNSGYQFLGDYENGPYTIAARNQIIRYQNEFWRLNAATTPPYTTTGTNSTSWATDVTHMVSVGDANLRQELASVNGAMMVGGLSSVTASSFGFTGSGNEAALATTFLNYCIDNNKLAVIDINVNWDGLVFSRGGVNLTGQGVISGFVVIKGDILKTRTNSVTVGTVNDYTTYAVGTTTFPGNFSAYSPGDKIVIELAADTAFNGSINQIGIHFSTVVSADSSQLVIADGLRFAFDKFVISKTTFVKYSGTLAVGTTTITGDFSAFSAGDVVRFENITGTDSVNSGTVYFEHSRVKSASASQLVLEDPLVTAFGDPFIVPAAFLNKLNILNANFDVLQLRAITSLQVKGCRFNRSINDYSYAGNFGDCIVTASTPSAMNFTYARRMTIDNIVTSGATGTTDNAAFKMMSPIECTVDGVVATDYGISSGSQSINGFYVDFLFTPYYNWGRNVHFSGISTGKDRGGLGIWLDGIKGGSLSNSHGGADSRLYELVNFTAEMTCDFGVFIRNPIRSKMTVDANFIQVTGPQYLDLIPTVRKADDKNAGRCISIAGSASGPWAVTVGNDVRIIDGVNYSTVSTDTTLYFQNINNLDVLNLKDFPGLAYSVNTSTSNVSGRICIGPHDLKNAINIGSYSGPYKIESDLAIGTKSSTQPAYDRRRIQWGQDWLFRSSVGILFKMGVEPASATDGYIISMKVPVPATATSGGQAGQWASDGSYLYVCTATNTWRRVAVATW
Physico‐chemical
properties
protein length:808 AA
molecular weight: 86761,95530 Da
isoelectric point:5,32760
aromaticity:0,10272
hydropathy:-0,05507

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PDP46
[NCBI] 		3388589 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNX38431.1 [NCBI]
Genbank nucleotide accession
PQ783785.1 [NCBI]
CDS location
range 33497 -> 35923
strand -
CDS
ATGGCTAACTGCAGTGATTATATCAGTGCTGACGACCTTAAAACAGGTAAACAAGCAGTCCAGCACATAGAACATGTGGCTAAAAGTAAAGATGCTAACGGTGCACATGCGTTAACTGTAACTGATACCATTCGCGGTGAGCAAGTAACGAACTTGACACTTGATGGTATGGAGACTCAGTTTCAGGATGCTCAGGCTGATAAAGAAGCACGTTTTCAGCAATTCCTTTTAAATTCTGGGTATCAGTTCCTGGGAGATTATGAAAACGGACCATACACAATTGCAGCTCGTAACCAGATTATCCGTTATCAGAATGAATTCTGGCGATTAAACGCGGCCACAACTCCACCATACACAACCACGGGTACAAATAGTACATCGTGGGCAACTGATGTTACTCATATGGTGAGTGTTGGTGATGCTAATTTACGCCAGGAACTGGCATCAGTAAACGGTGCTATGATGGTTGGCGGGTTATCGTCTGTTACAGCGTCATCTTTTGGCTTTACAGGTTCTGGAAACGAGGCTGCATTAGCGACCACTTTTTTAAATTACTGCATTGATAACAATAAATTAGCTGTGATTGATATCAACGTTAATTGGGATGGTCTTGTATTCTCCAGGGGAGGAGTTAACCTAACCGGGCAAGGTGTTATTAGCGGTTTTGTTGTCATAAAAGGCGATATATTAAAAACTCGTACTAATTCTGTAACTGTTGGTACTGTTAATGATTATACAACTTATGCTGTAGGTACTACAACTTTTCCTGGTAATTTTTCTGCGTATAGTCCCGGTGATAAGATTGTAATTGAACTAGCCGCAGATACCGCATTCAATGGTAGTATAAATCAGATTGGTATACATTTCTCAACTGTAGTTTCAGCTGACTCTTCACAATTGGTTATCGCCGATGGGCTACGTTTTGCCTTTGATAAATTTGTGATTAGTAAAACTACTTTTGTAAAATACTCTGGCACCCTGGCGGTAGGGACGACAACTATCACCGGCGATTTCAGCGCATTTTCAGCTGGTGACGTTGTACGCTTCGAAAACATTACCGGAACAGACTCCGTTAACTCCGGGACCGTCTATTTTGAACATTCCCGGGTTAAATCCGCCAGCGCTTCCCAGCTCGTTTTAGAGGACCCTCTGGTTACCGCCTTTGGCGATCCGTTTATCGTACCCGCCGCGTTCCTTAATAAACTTAATATTCTGAATGCGAATTTTGACGTTTTACAGCTCAGGGCGATAACGTCGCTGCAGGTGAAAGGCTGCCGGTTTAATCGAAGCATTAACGATTACTCTTACGCAGGTAACTTCGGGGACTGTATCGTTACGGCATCCACTCCGAGCGCGATGAACTTCACTTATGCTCGCAGGATGACGATTGACAATATCGTAACGTCTGGCGCTACCGGCACAACGGACAACGCCGCATTTAAGATGATGAGTCCTATCGAGTGTACGGTTGATGGCGTGGTCGCCACCGACTACGGGATCTCTTCAGGGTCACAATCCATTAACGGCTTCTATGTAGACTTCCTCTTCACCCCATATTACAACTGGGGCCGTAATGTGCATTTCTCCGGGATAAGCACAGGGAAGGACCGTGGCGGTCTGGGGATCTGGCTTGATGGTATTAAAGGCGGTTCGTTATCAAACTCACACGGCGGCGCGGATAGCCGTTTGTATGAACTTGTTAATTTTACTGCCGAAATGACTTGCGACTTTGGTGTTTTTATTCGAAACCCTATCCGGTCGAAAATGACCGTAGACGCAAATTTCATACAGGTAACCGGGCCTCAGTATCTGGACCTCATTCCCACGGTCCGCAAAGCCGACGATAAAAACGCGGGGCGGTGTATTAGTATTGCGGGGTCGGCATCAGGCCCGTGGGCGGTAACGGTCGGCAACGACGTGCGGATTATTGATGGCGTTAACTATTCAACCGTCTCGACGGATACAACACTGTATTTTCAGAACATCAACAATCTTGATGTCTTAAACCTTAAAGACTTTCCCGGACTTGCTTATTCCGTTAACACGTCGACTTCCAACGTTTCTGGTCGCATTTGTATCGGCCCGCACGACCTTAAAAACGCAATTAACATTGGCAGCTATTCCGGTCCGTATAAAATAGAGAGCGATCTTGCTATTGGAACAAAGTCATCGACACAGCCAGCATACGACAGACGTAGAATTCAGTGGGGGCAAGATTGGCTCTTCCGTAGTTCAGTTGGTATACTTTTTAAAATGGGTGTTGAACCAGCATCAGCGACAGATGGGTATATTATATCTATGAAGGTGCCAGTTCCAGCCACTGCAACATCTGGTGGGCAGGCTGGGCAATGGGCGTCAGATGGCTCCTATCTTTATGTTTGCACAGCAACTAACACATGGCGTCGTGTTGCTGTCGCTACTTGGTAA

Tertiary structure

PDB ID
cd2b4cdd5741d520ca480e3f9af2abc86bd6b339847bfe0cba6ee90cd32a4eaf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7208
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a Plasmid-Dependent DNA Phage with Potential for Targeted Gut Microbiota Modulation Jung,G., Kim,J. and Shin,H. 2025-06-04 — GenBank