Protein

View in Explore
Genbank accession
YP_010658392.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,66
Seq2Symm
C1 confidence 0,648
C1 0,648
C3 0,068
I 0,005
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MGYTWRKEAGVWKKVTSMFRKESGVWNPVKSGYQKVAGVFVSVFESEVIVEISTNQTDLILKDLFSSEDWASGKSKTVWIKNTATISPSVQAFAVVAQPAVDTGIWGGTLTLINDGIIQGKGGAANSGVGGNALYVGTVSNSTKKLQIKNYGTIRAGGGGGGKGGTGGGGQYTSTVTEGPYYAGYPASGASRYYWDTTNGSSIDAVYWNNSTVISSNVDSPHTVGSYTYTRGASRDSYTSGGLSHTVYEVSRSYQTTTNTSGGVGGAGGRGQGSDGANAVGTNGSAGGTNAGTGGKGGTGGTWGNSGAVGFTGSSGNRTAGTAGTAGGAAGYAYSTALYNIVVPGIILGRVA
Physico‐chemical
properties
protein length:352 AA
molecular weight: 35475,38100 Da
isoelectric point:9,39641
aromaticity:0,09659
hydropathy:-0,24972

Domains

View on InterPro
Domain architecture
YP_010658392.1
1 352 aa
RBD 47–176 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Rhizobium phage RHEph16 [NCBI] · taxon 2836132
Uroviricota Caudoviricetes Schitoviridae Acanvirus Acanvirus Rheph16
Host
Rhizobium etli [NCBI] · taxon 29449
Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Rhizobium Rhizobium etli

Coding sequence (CDS)

Genbank protein accession
YP_010658392.1 [NCBI]
Genbank nucleotide accession
NC_070856 [NCBI]
CDS location
range 66269 -> 67327
strand -
CDS
ATGGGATATACTTGGCGAAAAGAAGCAGGCGTCTGGAAGAAAGTCACCTCCATGTTCCGTAAGGAAAGTGGTGTCTGGAATCCTGTTAAGAGTGGGTATCAAAAGGTTGCTGGCGTTTTTGTAAGCGTCTTTGAATCTGAAGTTATCGTAGAAATAAGTACGAACCAAACAGATTTGATTCTGAAGGATCTTTTCTCATCTGAGGATTGGGCTTCTGGTAAAAGCAAAACTGTATGGATTAAAAATACAGCAACCATCTCCCCAAGTGTTCAAGCATTTGCAGTGGTTGCTCAACCTGCTGTAGATACTGGTATTTGGGGTGGAACTCTTACTCTCATCAACGACGGTATTATTCAAGGTAAAGGTGGTGCTGCAAACTCTGGCGTTGGTGGTAATGCTCTTTATGTTGGTACCGTCTCTAACAGCACCAAGAAACTACAAATCAAGAACTATGGTACCATCCGTGCAGGAGGTGGTGGTGGCGGTAAGGGAGGTACAGGCGGTGGTGGTCAATACACTTCCACTGTAACTGAGGGTCCTTACTATGCTGGTTATCCAGCAAGTGGTGCCAGTAGATATTATTGGGATACCACGAATGGTAGTAGTATTGATGCCGTTTATTGGAACAACTCTACTGTAATTTCCAGTAACGTTGATAGCCCACATACTGTAGGTAGCTATACCTATACTCGTGGGGCTTCTAGAGATAGCTACACATCAGGCGGTCTGTCACACACCGTCTACGAAGTATCTAGATCTTATCAAACCACCACAAATACTTCAGGTGGTGTAGGTGGTGCAGGTGGTAGGGGTCAAGGATCTGACGGAGCCAATGCAGTAGGTACTAACGGTAGTGCTGGTGGTACCAATGCTGGTACTGGCGGTAAAGGTGGAACAGGTGGTACTTGGGGTAACTCTGGTGCAGTAGGTTTCACAGGTAGCTCTGGTAATAGAACTGCCGGTACAGCAGGTACTGCTGGTGGTGCTGCTGGTTACGCATATTCAACAGCTCTATATAATATCGTAGTTCCAGGTATTATTCTTGGTCGTGTTGCTTAA

Genome Context

Tertiary structure

YP_010658392.1
ESMFold structure
Source ESMFold
pLDDT 85.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank