Protein

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Genbank accession
BDR26362.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MATEKKSLMIPPIGTKGRYELISPFDKLIKPNTLYVNSAVRAFIDIENNGRNVYDTYYKPLNIDISEYNKDRENGEYIVTLTTEQYNPVYVPSSYIARYPDLNGVPYQQTVLSASLGALPVTLDLTNLQAKVAGVISDVIGVEPVINLGSMPLMSDVTPQQHEAAENAREAKIKDRETDYARIVKLEADNTSLSQRLAIAENLLIENGIIS
Physico‐chemical
properties
protein length:211 AA
molecular weight: 23454,34150 Da
isoelectric point:4,83912
aromaticity:0,07109
hydropathy:-0,25071

Domains

Domains [InterPro]
IPR055618
8–208
IPR055618
Coil
183–203
Coil
BDR26362.1
1 211
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. LC
[NCBI] 		2972144 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR26362.1 [NCBI]
Genbank nucleotide accession
LC727699 [NCBI]
CDS location
range 16034 -> 16669
strand +
CDS
ATGGCTACTGAGAAAAAATCTCTAATGATCCCACCAATTGGGACTAAAGGGCGTTATGAGTTAATTTCACCTTTTGACAAACTCATAAAACCCAATACACTTTATGTCAATAGTGCTGTACGAGCATTTATCGATATTGAGAATAATGGTAGAAATGTTTATGATACTTATTATAAACCATTAAATATTGATATATCGGAATACAATAAAGATCGTGAGAATGGTGAATATATTGTTACTCTCACGACTGAACAATATAACCCGGTATATGTACCAAGCAGTTATATCGCACGTTATCCTGATTTGAACGGTGTGCCATACCAGCAAACTGTTCTATCCGCATCACTAGGGGCTCTTCCAGTAACATTAGACTTAACTAATCTACAAGCTAAAGTAGCCGGTGTTATTTCTGATGTGATTGGAGTAGAACCTGTTATAAATCTTGGGTCAATGCCTCTTATGTCAGACGTGACACCACAACAACACGAAGCAGCAGAAAATGCACGTGAAGCGAAAATCAAAGATCGTGAAACTGATTACGCTAGAATTGTTAAGTTAGAAGCAGATAACACAAGTCTATCACAAAGGTTAGCAATTGCAGAGAATCTTCTCATTGAGAATGGTATTATCTCCTAA

Tertiary structure

PDB ID
dabaa7b74c5cfb61fe1f7b2b7ab596381e89f170bed6af17fa3f5faf5b7aa1e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4359
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage LC Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank