Protein

View in Explore
Genbank accession
AZU97917.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MPYITHQKDPAMIAPPDCYQVPDGTHLVTWLHETFVDADAMCGDLACDIIINGRVIYRNDDDNYNPNELDFITLNAMDTVSIVNRPAGIEVVAIVIAVISIAASVYMMATMNTPQLPGAGTQANESPNNRLNAATNEFRPNQAIPECFGRGVSYPDFAQPSYYFYENNVRRQVELFTISVGTVNVPEIRVAETEVSEIPNTSATVYLPGQSVPNEYLNVHRGASTVSEDVLQAPNDGNVIKGNVTFGVIGGNPTTDLTFSDKNVIYDLALSAGGYIYLRSSESLSIYPTSGTAQVSDICPVGTQALRNGSVFHRTSQAVGGEITALDFGALTATVGGVSVTLGAAESSLPTLNGVLEITNVDINATPAVVTVDHVSAINGTYVGSVGRGYSQGVIGEGTNGELDTWVGWFEVPGDEIGEVWIHWKAPQGIRNLDGDGNSISASITLEMQIESLDSNGDPTGNIWTQNPVLQGNTLDAQFRTTIFTPEDFPAMTRSGYRVRTRRITNVISGQGRASERVQLEGYVSVTPYSNPNFGDVTMLLMLRNASLFGADQAGKKINCDYERLLPTYDRNTGVYDQNTLTATDSFADAAAYTLIKAGGTPESRVDLSGLYEIYDGLSDPQLGGFTFTFDDENVSMGERIDAICAVARVSSFGENALWEFSRDEAKPVRSALFNRRSLIDNQGQQTYMLQRSDDADSVIVYYVDPDTNTEKSIKRRIDIESAAIVNGETGSVPKEIRLTGCRNSFQATNRADLEIRRIAYQRHTIRDIARREALEVRLTDRVGWVDINDTDYFDGEILGINGSTYDTSERFEPIDGETYFVYITDNEGYPSNSVQCFPRTDTEFGFIASGISGAFLPNGDEQLGSRYFIANASNLSAQDFTLVKRAPTGDRKVEIELVSYDSRMYEMDDVTLPDGIAFVPVGIVSTDYQQTPNAAQATLTFESDGDITFTGGSSIWHSNAPNTGIGQGYQLKVSQTSGDTPSADFALDTWVDMTTSRTLTLDQSGVDVADAIMEVQIREIADPSNIASGEVRLVSAELGALSLPVSVTATVANQPNEATCRFDLESDGTWTANDGQVGAYITSGYNVGSQYEARATNLAGDTPAGLFDVWVALDGSGTEWTLYTQASATATFDVEVREIANTANTNTCTVTLNAGVA
Physico‐chemical
properties
protein length:1158 AA
molecular weight: 125268,88550 Da
isoelectric point:4,29699
aromaticity:0,08463
hydropathy:-0,22427

Domains

View on InterPro
Domain architecture
AZU97917.1
1 1158 aa
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AZU97917.1
1 1158 aa
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,9482
Central domain 237 435 200 0,7433
C-terminal 436 1158 722 0,1303
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage LP.1 [NCBI] · taxon 2500150
No lineage information
Host
Vibrio maritimus [NCBI] · taxon 990268
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
AZU97917.1 [NCBI]
Genbank nucleotide accession
MK249872 [NCBI]
CDS location
range 26497 -> 29973
strand -
CDS
ATGCCATACATTACCCATCAAAAAGATCCGGCCATGATCGCGCCGCCAGATTGCTATCAAGTACCTGACGGCACGCACCTCGTAACTTGGCTGCATGAAACGTTTGTTGACGCTGACGCTATGTGTGGCGATTTGGCTTGCGACATCATTATCAATGGCCGCGTCATATACCGCAACGACGATGACAACTACAACCCAAACGAGCTTGATTTTATCACGCTAAACGCTATGGATACGGTGAGTATTGTTAATCGTCCGGCGGGTATAGAAGTCGTTGCTATAGTTATCGCAGTTATATCCATCGCGGCCAGTGTTTACATGATGGCAACAATGAACACACCCCAGCTGCCTGGAGCCGGAACGCAAGCCAACGAATCACCCAACAACCGACTAAACGCAGCAACTAACGAATTTAGACCAAACCAAGCGATCCCAGAGTGTTTTGGGCGTGGCGTTTCGTATCCAGATTTTGCACAGCCAAGTTACTATTTTTATGAAAACAACGTACGCCGACAGGTCGAGCTATTCACGATCTCGGTTGGCACCGTTAACGTGCCAGAAATCCGCGTAGCCGAGACGGAAGTGAGTGAAATCCCCAACACTAGTGCGACGGTCTATCTACCTGGTCAAAGCGTGCCAAATGAATACCTAAACGTGCACCGTGGAGCATCAACTGTTAGCGAGGATGTGTTACAAGCCCCAAACGATGGTAACGTAATTAAAGGCAATGTTACTTTTGGCGTTATCGGAGGCAATCCAACAACAGATCTTACCTTCTCAGATAAAAATGTCATTTACGATTTAGCGCTATCGGCAGGCGGTTACATTTACTTGAGAAGCAGTGAATCGCTGTCTATCTATCCAACATCCGGCACGGCGCAAGTTAGTGATATATGCCCAGTTGGAACGCAGGCGCTGAGAAATGGCTCGGTATTTCACAGAACAAGCCAAGCAGTTGGCGGTGAAATCACAGCTTTAGACTTTGGCGCATTAACCGCCACAGTGGGCGGCGTATCTGTTACATTAGGCGCGGCAGAATCATCACTACCAACATTAAACGGTGTGCTTGAAATCACTAACGTTGATATTAACGCAACGCCAGCCGTCGTAACAGTTGACCATGTTAGCGCTATTAATGGCACTTACGTTGGTTCAGTTGGCCGTGGCTACTCTCAAGGCGTCATCGGCGAAGGCACAAACGGCGAGCTTGATACGTGGGTGGGATGGTTTGAAGTACCCGGCGACGAGATAGGTGAGGTTTGGATACACTGGAAAGCCCCGCAAGGCATCCGCAATTTGGACGGTGATGGCAATTCGATAAGTGCCAGTATCACGCTAGAAATGCAAATCGAGTCACTAGATAGCAACGGAGATCCGACAGGTAATATATGGACGCAAAACCCAGTATTGCAAGGCAATACACTTGACGCGCAATTCAGAACGACCATATTTACGCCGGAAGACTTCCCAGCCATGACACGCAGCGGCTATCGAGTGCGCACAAGGCGCATAACTAACGTGATCAGCGGGCAAGGTCGAGCGAGTGAACGTGTGCAGCTTGAGGGTTATGTTTCAGTCACGCCATACAGCAACCCAAACTTTGGCGACGTCACTATGTTGCTAATGCTGCGAAATGCGTCGCTATTTGGTGCTGACCAGGCGGGTAAAAAAATCAACTGCGACTATGAGCGACTGCTGCCAACGTATGATCGCAACACTGGCGTGTATGACCAAAACACACTAACCGCCACCGATAGCTTTGCCGATGCTGCGGCCTATACGCTAATCAAAGCGGGCGGCACACCAGAAAGCCGTGTCGATTTGTCTGGACTGTACGAAATTTACGACGGACTGAGCGATCCGCAGTTAGGCGGCTTCACCTTTACGTTTGATGACGAAAACGTATCAATGGGTGAGCGTATTGACGCTATTTGCGCCGTTGCCCGCGTTAGCTCGTTTGGTGAAAATGCGCTTTGGGAGTTCTCACGCGATGAGGCAAAACCCGTCCGTTCTGCGTTATTTAATAGACGCTCGTTGATTGATAACCAAGGCCAACAAACCTACATGCTGCAACGCTCGGACGATGCCGACAGCGTGATCGTTTACTATGTTGACCCTGACACCAACACAGAAAAAAGCATCAAACGACGTATTGATATAGAGAGTGCCGCGATCGTCAACGGAGAAACGGGCAGCGTACCGAAAGAGATTAGGTTAACAGGTTGTCGAAATTCATTTCAAGCAACCAACCGAGCCGATCTTGAGATTCGCCGCATTGCCTATCAGCGCCACACTATCCGCGACATTGCGCGCCGTGAAGCGTTGGAGGTTCGATTAACAGATCGTGTTGGGTGGGTGGACATCAACGACACGGACTATTTCGACGGCGAGATATTAGGCATTAACGGCAGTACGTACGACACAAGCGAGCGATTCGAGCCAATAGATGGCGAAACGTACTTTGTTTATATCACAGATAACGAAGGCTACCCGTCTAACTCTGTGCAGTGCTTCCCGCGTACGGATACAGAATTCGGCTTTATCGCCTCGGGTATATCTGGCGCATTTCTGCCTAACGGTGACGAGCAACTAGGATCGCGTTACTTTATCGCCAATGCAAGCAACCTATCGGCGCAAGACTTTACGCTCGTTAAACGTGCGCCAACGGGTGATCGCAAGGTAGAGATTGAGCTCGTCAGCTACGATTCGCGCATGTATGAAATGGATGACGTGACGCTGCCGGACGGCATTGCTTTCGTGCCAGTTGGGATTGTATCGACTGACTATCAGCAAACACCAAACGCAGCGCAAGCCACACTCACTTTTGAATCAGATGGTGATATTACATTCACAGGCGGCTCGTCAATCTGGCACAGCAACGCGCCAAATACTGGTATAGGTCAAGGCTATCAATTGAAGGTTTCACAGACATCAGGTGATACACCTAGTGCTGACTTTGCGCTCGATACGTGGGTTGATATGACGACAAGCCGAACCTTAACACTCGATCAGTCTGGCGTCGATGTGGCTGACGCTATCATGGAAGTACAGATCCGCGAGATAGCCGACCCTAGTAACATCGCTAGTGGTGAGGTTCGCTTAGTGTCCGCAGAGCTTGGGGCGTTGTCGCTTCCTGTATCTGTAACCGCAACAGTAGCCAACCAACCAAATGAGGCTACTTGTCGATTTGATCTAGAGTCAGATGGCACATGGACAGCTAACGACGGACAGGTGGGCGCTTATATTACTAGCGGCTACAATGTGGGCTCGCAATACGAAGCGCGCGCCACAAACCTTGCGGGTGACACTCCGGCGGGCTTGTTTGATGTTTGGGTAGCATTGGACGGCAGTGGTACGGAATGGACACTATACACCCAGGCAAGCGCGACAGCGACGTTTGATGTAGAGGTGCGCGAGATCGCTAACACTGCCAACACCAACACGTGCACTGTGACGTTGAATGCTGGTGTGGCGTAA

Genome Context

Tertiary structure

AZU97917.1
ColabFold structure
Source ColabFold
pLDDT 28.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Vibrio Phage LP.1 from the the coastal water of Qingdao, China Han,Y. 2019-07-13 — GenBank