Protein

View in Explore
Genbank accession
AZU97917.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,56
Protein sequence
MPYITHQKDPAMIAPPDCYQVPDGTHLVTWLHETFVDADAMCGDLACDIIINGRVIYRNDDDNYNPNELDFITLNAMDTVSIVNRPAGIEVVAIVIAVISIAASVYMMATMNTPQLPGAGTQANESPNNRLNAATNEFRPNQAIPECFGRGVSYPDFAQPSYYFYENNVRRQVELFTISVGTVNVPEIRVAETEVSEIPNTSATVYLPGQSVPNEYLNVHRGASTVSEDVLQAPNDGNVIKGNVTFGVIGGNPTTDLTFSDKNVIYDLALSAGGYIYLRSSESLSIYPTSGTAQVSDICPVGTQALRNGSVFHRTSQAVGGEITALDFGALTATVGGVSVTLGAAESSLPTLNGVLEITNVDINATPAVVTVDHVSAINGTYVGSVGRGYSQGVIGEGTNGELDTWVGWFEVPGDEIGEVWIHWKAPQGIRNLDGDGNSISASITLEMQIESLDSNGDPTGNIWTQNPVLQGNTLDAQFRTTIFTPEDFPAMTRSGYRVRTRRITNVISGQGRASERVQLEGYVSVTPYSNPNFGDVTMLLMLRNASLFGADQAGKKINCDYERLLPTYDRNTGVYDQNTLTATDSFADAAAYTLIKAGGTPESRVDLSGLYEIYDGLSDPQLGGFTFTFDDENVSMGERIDAICAVARVSSFGENALWEFSRDEAKPVRSALFNRRSLIDNQGQQTYMLQRSDDADSVIVYYVDPDTNTEKSIKRRIDIESAAIVNGETGSVPKEIRLTGCRNSFQATNRADLEIRRIAYQRHTIRDIARREALEVRLTDRVGWVDINDTDYFDGEILGINGSTYDTSERFEPIDGETYFVYITDNEGYPSNSVQCFPRTDTEFGFIASGISGAFLPNGDEQLGSRYFIANASNLSAQDFTLVKRAPTGDRKVEIELVSYDSRMYEMDDVTLPDGIAFVPVGIVSTDYQQTPNAAQATLTFESDGDITFTGGSSIWHSNAPNTGIGQGYQLKVSQTSGDTPSADFALDTWVDMTTSRTLTLDQSGVDVADAIMEVQIREIADPSNIASGEVRLVSAELGALSLPVSVTATVANQPNEATCRFDLESDGTWTANDGQVGAYITSGYNVGSQYEARATNLAGDTPAGLFDVWVALDGSGTEWTLYTQASATATFDVEVREIANTANTNTCTVTLNAGVA
Physico‐chemical
properties
protein length:1158 AA
molecular weight: 125268,88550 Da
isoelectric point:4,29699
aromaticity:0,08463
hydropathy:-0,22427

Domains

Domains [InterPro]
NF040662
414–907
NF040662
AZU97917.1
1 1158
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage LP.1
[NCBI] 		2500150 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZU97917.1 [NCBI]
Genbank nucleotide accession
MK249872 [NCBI]
CDS location
range 26497 -> 29973
strand -
CDS
ATGCCATACATTACCCATCAAAAAGATCCGGCCATGATCGCGCCGCCAGATTGCTATCAAGTACCTGACGGCACGCACCTCGTAACTTGGCTGCATGAAACGTTTGTTGACGCTGACGCTATGTGTGGCGATTTGGCTTGCGACATCATTATCAATGGCCGCGTCATATACCGCAACGACGATGACAACTACAACCCAAACGAGCTTGATTTTATCACGCTAAACGCTATGGATACGGTGAGTATTGTTAATCGTCCGGCGGGTATAGAAGTCGTTGCTATAGTTATCGCAGTTATATCCATCGCGGCCAGTGTTTACATGATGGCAACAATGAACACACCCCAGCTGCCTGGAGCCGGAACGCAAGCCAACGAATCACCCAACAACCGACTAAACGCAGCAACTAACGAATTTAGACCAAACCAAGCGATCCCAGAGTGTTTTGGGCGTGGCGTTTCGTATCCAGATTTTGCACAGCCAAGTTACTATTTTTATGAAAACAACGTACGCCGACAGGTCGAGCTATTCACGATCTCGGTTGGCACCGTTAACGTGCCAGAAATCCGCGTAGCCGAGACGGAAGTGAGTGAAATCCCCAACACTAGTGCGACGGTCTATCTACCTGGTCAAAGCGTGCCAAATGAATACCTAAACGTGCACCGTGGAGCATCAACTGTTAGCGAGGATGTGTTACAAGCCCCAAACGATGGTAACGTAATTAAAGGCAATGTTACTTTTGGCGTTATCGGAGGCAATCCAACAACAGATCTTACCTTCTCAGATAAAAATGTCATTTACGATTTAGCGCTATCGGCAGGCGGTTACATTTACTTGAGAAGCAGTGAATCGCTGTCTATCTATCCAACATCCGGCACGGCGCAAGTTAGTGATATATGCCCAGTTGGAACGCAGGCGCTGAGAAATGGCTCGGTATTTCACAGAACAAGCCAAGCAGTTGGCGGTGAAATCACAGCTTTAGACTTTGGCGCATTAACCGCCACAGTGGGCGGCGTATCTGTTACATTAGGCGCGGCAGAATCATCACTACCAACATTAAACGGTGTGCTTGAAATCACTAACGTTGATATTAACGCAACGCCAGCCGTCGTAACAGTTGACCATGTTAGCGCTATTAATGGCACTTACGTTGGTTCAGTTGGCCGTGGCTACTCTCAAGGCGTCATCGGCGAAGGCACAAACGGCGAGCTTGATACGTGGGTGGGATGGTTTGAAGTACCCGGCGACGAGATAGGTGAGGTTTGGATACACTGGAAAGCCCCGCAAGGCATCCGCAATTTGGACGGTGATGGCAATTCGATAAGTGCCAGTATCACGCTAGAAATGCAAATCGAGTCACTAGATAGCAACGGAGATCCGACAGGTAATATATGGACGCAAAACCCAGTATTGCAAGGCAATACACTTGACGCGCAATTCAGAACGACCATATTTACGCCGGAAGACTTCCCAGCCATGACACGCAGCGGCTATCGAGTGCGCACAAGGCGCATAACTAACGTGATCAGCGGGCAAGGTCGAGCGAGTGAACGTGTGCAGCTTGAGGGTTATGTTTCAGTCACGCCATACAGCAACCCAAACTTTGGCGACGTCACTATGTTGCTAATGCTGCGAAATGCGTCGCTATTTGGTGCTGACCAGGCGGGTAAAAAAATCAACTGCGACTATGAGCGACTGCTGCCAACGTATGATCGCAACACTGGCGTGTATGACCAAAACACACTAACCGCCACCGATAGCTTTGCCGATGCTGCGGCCTATACGCTAATCAAAGCGGGCGGCACACCAGAAAGCCGTGTCGATTTGTCTGGACTGTACGAAATTTACGACGGACTGAGCGATCCGCAGTTAGGCGGCTTCACCTTTACGTTTGATGACGAAAACGTATCAATGGGTGAGCGTATTGACGCTATTTGCGCCGTTGCCCGCGTTAGCTCGTTTGGTGAAAATGCGCTTTGGGAGTTCTCACGCGATGAGGCAAAACCCGTCCGTTCTGCGTTATTTAATAGACGCTCGTTGATTGATAACCAAGGCCAACAAACCTACATGCTGCAACGCTCGGACGATGCCGACAGCGTGATCGTTTACTATGTTGACCCTGACACCAACACAGAAAAAAGCATCAAACGACGTATTGATATAGAGAGTGCCGCGATCGTCAACGGAGAAACGGGCAGCGTACCGAAAGAGATTAGGTTAACAGGTTGTCGAAATTCATTTCAAGCAACCAACCGAGCCGATCTTGAGATTCGCCGCATTGCCTATCAGCGCCACACTATCCGCGACATTGCGCGCCGTGAAGCGTTGGAGGTTCGATTAACAGATCGTGTTGGGTGGGTGGACATCAACGACACGGACTATTTCGACGGCGAGATATTAGGCATTAACGGCAGTACGTACGACACAAGCGAGCGATTCGAGCCAATAGATGGCGAAACGTACTTTGTTTATATCACAGATAACGAAGGCTACCCGTCTAACTCTGTGCAGTGCTTCCCGCGTACGGATACAGAATTCGGCTTTATCGCCTCGGGTATATCTGGCGCATTTCTGCCTAACGGTGACGAGCAACTAGGATCGCGTTACTTTATCGCCAATGCAAGCAACCTATCGGCGCAAGACTTTACGCTCGTTAAACGTGCGCCAACGGGTGATCGCAAGGTAGAGATTGAGCTCGTCAGCTACGATTCGCGCATGTATGAAATGGATGACGTGACGCTGCCGGACGGCATTGCTTTCGTGCCAGTTGGGATTGTATCGACTGACTATCAGCAAACACCAAACGCAGCGCAAGCCACACTCACTTTTGAATCAGATGGTGATATTACATTCACAGGCGGCTCGTCAATCTGGCACAGCAACGCGCCAAATACTGGTATAGGTCAAGGCTATCAATTGAAGGTTTCACAGACATCAGGTGATACACCTAGTGCTGACTTTGCGCTCGATACGTGGGTTGATATGACGACAAGCCGAACCTTAACACTCGATCAGTCTGGCGTCGATGTGGCTGACGCTATCATGGAAGTACAGATCCGCGAGATAGCCGACCCTAGTAACATCGCTAGTGGTGAGGTTCGCTTAGTGTCCGCAGAGCTTGGGGCGTTGTCGCTTCCTGTATCTGTAACCGCAACAGTAGCCAACCAACCAAATGAGGCTACTTGTCGATTTGATCTAGAGTCAGATGGCACATGGACAGCTAACGACGGACAGGTGGGCGCTTATATTACTAGCGGCTACAATGTGGGCTCGCAATACGAAGCGCGCGCCACAAACCTTGCGGGTGACACTCCGGCGGGCTTGTTTGATGTTTGGGTAGCATTGGACGGCAGTGGTACGGAATGGACACTATACACCCAGGCAAGCGCGACAGCGACGTTTGATGTAGAGGTGCGCGAGATCGCTAACACTGCCAACACCAACACGTGCACTGTGACGTTGAATGCTGGTGTGGCGTAA

Tertiary structure

PDB ID
e967f4124494f836413a44587873b0f09c17f6d8e9cc328b8c2605998ea0b967
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2344
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Vibrio Phage LP.1 from the the coastal water of Qingdao, China Han,Y. 2019-07-13 — GenBank