Protein

View in Explore
Genbank accession
XGU02832.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,99
Protein sequence
MSDITANVVVSNPRPIFTESRSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVKIAQPLIINAAGKIVYNGQLVKIVTAQGHSMAIYDANGSQVDYIANVLKYDPDQYSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDVDYHFYNGEKVDFGGKALTIDCKAKFIGDGNITFTNLGTGSLVKSPYMESATTPWMIFPWDEDGNWITDAESVVSTLAQTRDKGYQPTVNDYVKFPGIESLLPDYAKNQGINSTLRIFECTGVNVENASGSVACYLFVGCSYCKMIEPDSIFGGYYGVITFENLSGSKGIGNYCIGGRTNYGSVSSVQFLRQDGGNGHDGGVIGFTSYRPGESGVKTWQGTVGGTSSRCYNLQFRKSLSISTVWDGFDLGADIGNETDRPGDFPLDEYPVHQLPTNHLIDDLVSIGSLGVGIGMDGKGGYVSNILMQDCAGSGGLWYTYGKTFTNVFVIDTNTLNFNANQLYIQGDCIVNGLRLVGIKPTPSNGLIVDAPNTTISGITGNVDSSRVNAANIIDPMLGNAIINSYQDTGSLDIRLHKLSPSLDALSIKAHSNGSGSGSAWCSLGAASGSVSDVVSIKVNYTDNRAAEIPFSPIVVSDGAVKDNSCFVPYWEENSLKALVKKADGSLVRITIATV
Physico‐chemical
properties
protein length:661 AA
molecular weight: 70749,42610 Da
isoelectric point:4,79263
aromaticity:0,09380
hydropathy:-0,10363

Domains

View on InterPro
Domain architecture
XGU02832.1
1 661 aa
ATT 1–113 · STR 114–661
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XGU02832.1
1 661 aa
Domain Start End Length (AA) Confidence
N-terminal 1 121 121 0,9861
Central domain 122 551 431 0,9837
C-terminal 552 661 109 0,9011
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage vB_ST415_1NRH [NCBI] · taxon 3236694
Viruses unclassified bacterial viruses
Host
Salmonella typhimurium [NCBI] · taxon 90371
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
XGU02832.1 [NCBI]
Genbank nucleotide accession
PP921804.1 [NCBI]
CDS location
range 25355 -> 27340
strand -
CDS
ATGTCAGATATCACTGCCAACGTAGTTGTTTCTAACCCTCGTCCAATCTTTACTGAATCCCGTTCGTTTAAAGCTGTTGCTAATGGGAAAATTTACATTGGTCAGATTGATACCGATCCGGTTAATCCTGCCAATCAGATACCCGTATACATTGAAAATGAGGATGGCTCTCACGTCAAGATTGCTCAGCCGCTAATTATCAACGCAGCCGGTAAAATCGTATACAACGGCCAACTGGTGAAAATTGTCACCGCTCAGGGTCATAGCATGGCTATCTATGATGCCAATGGTTCTCAGGTTGACTATATTGCTAACGTATTGAAGTACGATCCAGATCAATATTCAATAGAAGCTGATAAAAAATTTAAGTATTCAGTAAAATTATCAGATTATCCAACATTGCAGGATGCAGCATCTGCTGCGGTTGATGGCCTTCTTATCGATGTTGATTATCATTTTTATAATGGAGAGAAAGTTGATTTTGGTGGTAAGGCATTAACCATCGACTGTAAAGCAAAATTTATTGGTGATGGTAATATTACATTTACTAATCTTGGTACTGGTTCTTTAGTAAAGTCCCCATATATGGAAAGTGCTACAACACCATGGATGATTTTTCCATGGGATGAGGATGGCAACTGGATTACTGATGCCGAATCAGTTGTTTCAACGTTGGCACAAACCAGGGATAAGGGGTATCAACCAACCGTAAACGACTACGTCAAATTTCCTGGAATTGAATCACTTCTTCCTGACTATGCAAAGAATCAAGGGATAAATTCAACATTACGGATTTTTGAATGTACAGGAGTTAACGTAGAAAATGCGTCGGGGTCTGTAGCATGCTACCTTTTTGTTGGATGTAGTTATTGTAAAATGATTGAGCCAGATTCTATCTTTGGTGGTTATTATGGCGTAATAACTTTTGAGAATCTGTCAGGAAGCAAAGGGATTGGAAACTATTGTATTGGTGGCAGGACAAATTATGGATCAGTAAGCTCCGTGCAATTTCTTAGGCAAGATGGTGGAAATGGGCACGATGGTGGGGTTATAGGCTTTACTTCTTATCGACCTGGTGAGTCAGGTGTAAAAACGTGGCAAGGAACCGTGGGCGGGACTTCATCCAGATGCTATAATCTTCAGTTCCGTAAATCATTATCCATATCTACTGTATGGGATGGTTTTGACCTGGGCGCAGACATCGGCAATGAAACTGACAGACCAGGTGACTTCCCTTTAGATGAGTACCCAGTTCATCAATTACCAACCAATCATTTAATTGATGACCTTGTATCTATTGGTTCGCTAGGTGTTGGTATAGGAATGGATGGTAAAGGTGGCTATGTATCAAACATATTGATGCAGGATTGTGCAGGATCTGGTGGTCTGTGGTATACATATGGTAAAACATTCACCAATGTCTTTGTCATTGACACAAATACTCTTAACTTTAATGCCAATCAGTTATATATACAAGGTGATTGTATTGTTAATGGATTGCGTTTAGTTGGCATAAAACCAACGCCATCGAACGGATTGATAGTAGACGCACCCAACACCACCATATCTGGAATTACCGGAAACGTTGATAGCAGTAGAGTTAATGCCGCCAATATCATTGACCCAATGCTTGGAAACGCAATAATTAATAGCTATCAAGATACAGGATCTCTAGATATAAGACTGCACAAATTAAGCCCATCTTTGGACGCATTAAGTATTAAGGCGCATTCAAATGGTTCTGGTAGTGGGTCAGCATGGTGTTCTTTAGGTGCTGCGTCTGGAAGTGTTAGTGATGTCGTATCTATAAAAGTTAACTACACCGACAACAGGGCAGCAGAAATACCGTTCAGCCCAATCGTCGTTAGCGATGGTGCAGTAAAAGATAACTCTTGCTTCGTCCCATACTGGGAAGAAAACTCACTAAAAGCCCTTGTCAAGAAAGCTGATGGATCTTTAGTGAGGATTACAATAGCAACAGTTTGA

Genome Context

Tertiary structure

XGU02832.1
ESMFold structure
Source ESMFold
pLDDT 65.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete Genomic Characterization of phages against Salmonella spp. and Campylobacter spp. isolated in the United Kingdom Mutai,I.J., Gurusinghe,A., Wang,B., Clark,M. and Bhandare,S.G. 2021-12-15 — GenBank