Protein

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Genbank accession
YP_009845354.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSRNLMPKSGAMAPYIVVNRDAAVAGVFSIDGEAGAVVLTSKYLQISKYNLDQQALATRLTGIDSSIQSNTEAIGNINTAIGSINSSLSAKAAKGANNDITELNALTKAITVSQGGTGATSPDGARLALELNHLTKSTDVSYMGSPDGSKLLYISNEGAWGVTAEGGGTNYALPITQGGTGALSAAEALVKLMDGKPLPLAADGQGPYDAVTVRQLSNISGGGNASMSGVMNNFIGAVEWFNGNRTKLPAGYIPADGQLESRTDPKTRDLWAAISGGLFVSVSDTEWITNSYGQDYQKTGNRGAYSTGDGSTNFRVPDLNGVRRNGDTMDGIPFAGYDTPYAAFLRGDGGGSINGVFASGALNMSAAPNITGNFSVRVPNMHGMYATGIFSGINHTGWPDAPDASYSGGSGTADFVDTQKYGYSLNAAAGSPVYGRDGTPEVRPTAVTGLWIIRANGSFNAAGSQYHVINGDSTRPTDGTTTYGGFAYSDYRIGETVNHSALIVSAKRFGNPYSVAVLQSYNNETGDLANLEVQSNGVVNLPTSINNKSWIKAFGANGLHLDAATTAQDLHTMPGGGCGVSQAERNAIELNNNPGAVGSGGYVNWLQGWWYDDRFQFGAIRSGSTVLDAVALSTYSNALGLKQWFFRANDGRIASTAGTIAIEGSDIKLKENIVRAPEGALDRITKITPREFDWKAGGRHDRGYIAQELRDVDPTYVYSSTVGEGEEVLNVSTSALISDLIAAVTTLKQELDSAKLEIKKLKAK
Physico‐chemical
properties
protein length:764 AA
molecular weight: 80093,82470 Da
isoelectric point:5,31595
aromaticity:0,08115
hydropathy:-0,24450

Domains

Domains [InterPro]
DC_0017
STR
1–764
DC_0017
IPR030392
CHP
665–758
IPR030392
IPR030392
CHP
665–717
IPR030392 Coil
YP_009845354.1
1 764
Architecture
STR
STR 1-764
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009845354.1
1 764
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9594
Central domain 143 341 200 0,0884
C-terminal 342 764 422 0,8603
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-764

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Sepoy
[NCBI] 		2565517 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus Sds2
Host Salmonella enterica subsp. enterica serovar Heidelberg
[NCBI] 		611 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009845354.1 [NCBI]
Genbank nucleotide accession
NC_048760.1 [NCBI]
CDS location
range 84207 -> 86501
strand -
CDS
ATGTCACGTAATTTAATGCCTAAATCTGGCGCAATGGCGCCCTACATTGTAGTTAATAGAGATGCTGCTGTTGCTGGAGTTTTCTCTATTGACGGAGAGGCTGGCGCTGTTGTACTTACTTCTAAGTACTTACAAATCTCTAAGTATAATTTAGATCAGCAAGCTCTAGCTACTCGTCTTACTGGAATAGATAGCTCTATTCAAAGTAATACTGAAGCTATTGGAAATATTAATACTGCAATTGGTAGTATTAATAGTAGTCTAAGTGCCAAGGCGGCTAAGGGTGCTAATAATGATATTACAGAATTAAATGCACTTACTAAGGCTATTACAGTATCTCAAGGTGGTACAGGTGCTACTTCTCCAGATGGAGCACGTTTAGCACTAGAATTAAATCATCTCACTAAGTCAACAGATGTCTCATATATGGGATCTCCTGATGGCTCAAAGTTACTTTATATTAGTAATGAGGGGGCTTGGGGAGTTACTGCTGAGGGTGGTGGCACTAACTATGCACTACCTATTACTCAGGGTGGTACAGGTGCTTTAAGTGCAGCAGAGGCACTAGTTAAGCTAATGGATGGTAAGCCCCTACCCCTAGCTGCTGATGGTCAAGGTCCCTACGATGCGGTGACTGTAAGGCAACTATCTAATATTTCCGGCGGTGGAAACGCTAGTATGAGTGGGGTTATGAATAACTTCATAGGTGCTGTTGAGTGGTTTAATGGTAACCGTACTAAGCTACCGGCTGGGTACATACCGGCAGACGGTCAATTAGAGAGTCGTACTGATCCTAAGACTAGAGATCTATGGGCGGCAATTTCAGGTGGATTATTCGTAAGTGTTAGCGATACAGAGTGGATAACTAATTCCTATGGCCAAGATTACCAAAAAACAGGTAATAGAGGTGCGTATTCTACAGGAGATGGCTCTACTAACTTCCGTGTACCTGATTTAAATGGTGTTAGAAGAAATGGGGATACTATGGATGGAATTCCTTTCGCAGGATATGATACCCCTTATGCAGCATTCCTTCGTGGTGATGGTGGTGGTAGTATTAATGGAGTATTTGCCTCCGGGGCATTAAATATGAGTGCTGCTCCTAATATAACTGGTAACTTTTCTGTAAGAGTACCAAATATGCATGGAATGTACGCTACTGGTATTTTCTCAGGTATAAATCATACAGGATGGCCGGATGCTCCAGATGCTAGTTATTCTGGAGGAAGTGGAACAGCGGATTTTGTAGATACTCAGAAGTATGGATATTCTCTAAATGCTGCAGCAGGTAGCCCAGTATATGGAAGAGATGGTACACCAGAGGTACGCCCTACTGCTGTTACTGGTCTTTGGATTATCCGTGCTAACGGTTCTTTTAACGCTGCTGGTTCACAGTATCATGTTATTAATGGGGACTCTACACGCCCTACTGATGGAACTACTACGTATGGTGGCTTTGCATATAGCGACTACAGAATAGGGGAAACAGTTAATCATTCAGCTTTAATAGTAAGTGCCAAAAGATTTGGTAATCCTTATAGTGTTGCTGTTCTTCAGTCCTATAATAATGAGACAGGGGATCTTGCCAACTTAGAGGTACAATCTAATGGTGTTGTTAACTTACCTACTTCGATTAATAATAAATCCTGGATAAAAGCTTTTGGTGCCAACGGCCTACATTTAGATGCTGCTACTACTGCTCAAGATCTGCATACTATGCCTGGTGGAGGTTGTGGTGTATCTCAAGCAGAGAGAAATGCTATTGAGTTGAATAATAACCCAGGTGCTGTAGGTTCTGGTGGTTATGTTAACTGGCTGCAAGGATGGTGGTATGATGATAGGTTCCAGTTCGGTGCCATTCGTAGTGGTTCTACTGTACTGGATGCCGTAGCCTTATCTACATATTCTAATGCATTGGGGTTAAAACAGTGGTTCTTTAGAGCTAATGATGGTAGGATTGCTTCCACTGCAGGTACTATTGCTATTGAAGGTTCCGATATCAAACTTAAGGAGAATATAGTTAGAGCACCAGAAGGGGCTTTAGATAGGATAACTAAAATCACCCCTAGAGAGTTTGACTGGAAAGCTGGGGGCAGACATGATAGAGGGTATATTGCACAGGAATTACGCGATGTAGATCCTACCTATGTATATTCATCAACTGTTGGGGAAGGAGAAGAGGTATTAAACGTTAGTACATCTGCTTTGATTTCTGACTTAATAGCTGCTGTTACAACTCTTAAACAAGAATTGGATTCTGCCAAATTAGAAATTAAAAAGCTAAAAGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
60a0d5985a4ccddaa92ba180f9cd3cf862900dc1dd1d6d0bf683eff506ad33be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6553
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50