Phage RBP Database

Genbank accession

WJN62953.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,97

Protein sequence

MGFNVIPAPEISGLTGAPGAQGLKGDKGSSILTGTAAPSASQGIDGDWYFMEDTRTFLGVTSTTFTIYQKVAGAWTVVGNTLGGSKWYVNTTSTPSTDTKPGDMLLRTDTGDIWQRTASGWGSPVGNIRGPQGIQGIQGIQGVAGPQGPEGPQGPQGPAGPAGTQYVFRGGWAAGVAYAVNDFARYNGSTYRVTTAHTSTAGNTPDVATGYYALLAQKGDKGDTGPEGPQGPQGIQGEPGPAGADGAGAVDSVNGKTGVVVLTPQDIGAVDPDDATLNDFMVINATAMNNYGIVAMRKLNKKRWSFMVSGSTESGSDAGSNFLLQSYTDAEAEKTVHIYGERSSGSTVIGSTQPMNGARLTVDGGAIGIVSQAADPITSSLGPKLYSKTGRLYVQRGTNATPGGPQQWEVQPRADEWLPEDLGLKAWSSDPAVCQSAGAYTGTTGIRITAVRLRETQLINRIGWHFLGYAGGLQTGSWAALYNSSGTRVATSGDLSTATYEPAEQHGSGGGFSSAPLTATYTAVPGIYYIAWRFIYNTTTGDGPMLLQYENSAGAPPNSFGYTPVKRFGVISGTTLTASPTSLTVSSFENGANRFWAALA

Physico‐chemical properties

protein length:	600 AA
molecular weight:	62083,88900 Da
isoelectric point:	5,28889
aromaticity:	0,09000
hydropathy:	-0,27867

Domain architecture

WJN62953.1

1 600 aa

ATT 172–214 · STR 219–268 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR050149
Unmapped

IPR050149

G3DSA:2.10.10.20
ATT

G3DSA:2.10.10.20 G3DSA:1.20.5.320

IPR036573
STR

IPR036573

cd12214
CBM

cd12214

IPR003610
CBM

IPR003610

WJN62953.1

1600 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1519
ATT

DC_1519 DC_1175

WJN62953.1

1600 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR050149	Unmapped	-	13	248	InterPro	Collagen superfamily	-	-	-	-
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	172	214	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits
IPR036573	STR	IPR036573	172	209	Merged direct domain	Carbohydrate-binding module superfamily 5/12	Central	Low	Positional only	2 proteins / 2 hits
cd12214	CBM	DC_0028	172	212	InterPro cluster	ChiA1_BD	C-terminal	High	Text match	29 proteins / 44 hits
IPR003610	CBM	DC_0028	172	205	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	219	268	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits

Proteins with similar domain architecture

Phage

Streptomyces phage phiScoe25 [NCBI] · taxon 3038339

No lineage information

Host No host information

Genbank protein accession

WJN62953.1 [NCBI]

Genbank nucleotide accession

OQ672746.1 [NCBI]

CDS location

range 18061 -> 19863
strand +

CDS

ATGGGCTTCAACGTCATCCCCGCTCCCGAGATCTCCGGTCTCACCGGAGCTCCTGGCGCGCAGGGCCTGAAGGGCGACAAGGGCTCCTCGATCCTGACCGGCACCGCAGCTCCGTCTGCGAGCCAGGGCATCGACGGCGACTGGTACTTCATGGAGGACACCCGGACGTTCCTGGGTGTCACCTCCACCACGTTCACGATCTACCAGAAGGTGGCGGGTGCGTGGACGGTTGTCGGCAACACCCTCGGTGGCTCGAAGTGGTACGTCAACACGACGTCGACCCCGAGCACCGACACGAAGCCGGGCGACATGCTCCTCCGCACCGACACGGGCGACATCTGGCAGCGCACCGCTTCCGGTTGGGGATCTCCTGTCGGCAACATCCGTGGACCGCAGGGCATCCAGGGCATCCAGGGCATCCAGGGTGTGGCTGGCCCACAGGGTCCTGAAGGGCCGCAGGGTCCGCAGGGTCCTGCCGGTCCGGCTGGCACCCAGTACGTCTTCCGTGGTGGCTGGGCGGCTGGCGTCGCCTACGCGGTGAACGACTTCGCTCGCTACAACGGGTCGACGTACCGGGTCACCACGGCGCACACATCGACTGCGGGCAACACCCCCGACGTGGCCACCGGCTACTACGCGCTGCTCGCGCAGAAGGGCGACAAGGGCGACACCGGCCCCGAGGGTCCGCAGGGACCGCAGGGCATCCAGGGCGAGCCTGGCCCGGCTGGAGCTGACGGCGCTGGCGCGGTCGACTCGGTGAACGGCAAGACCGGCGTGGTCGTCCTGACCCCGCAGGACATCGGTGCCGTTGACCCGGACGACGCGACGCTGAACGACTTCATGGTCATCAACGCCACGGCGATGAACAACTACGGCATCGTCGCCATGCGCAAGCTGAACAAGAAGCGCTGGTCCTTCATGGTGTCCGGCTCGACCGAGTCCGGCTCGGACGCGGGCTCGAACTTCCTGCTCCAGAGCTACACCGACGCTGAGGCCGAGAAGACCGTGCACATCTACGGTGAGCGGTCCTCGGGCTCCACGGTCATCGGCTCGACCCAGCCCATGAACGGAGCTCGGCTCACGGTCGACGGCGGTGCCATCGGCATCGTCTCTCAGGCCGCTGACCCGATCACCTCCAGCCTCGGCCCGAAGCTGTACTCGAAGACCGGTCGGCTCTACGTCCAGCGCGGCACGAACGCCACGCCGGGCGGTCCCCAGCAGTGGGAGGTCCAGCCGCGAGCTGACGAGTGGCTGCCCGAAGACCTGGGCCTGAAGGCGTGGTCCTCCGACCCGGCTGTGTGCCAGTCGGCTGGCGCGTACACCGGCACCACGGGCATCCGCATCACGGCTGTGAGGCTGCGTGAGACGCAGCTCATCAACCGGATCGGGTGGCACTTCCTCGGCTACGCGGGAGGGCTCCAGACGGGCTCCTGGGCCGCGCTCTACAACAGCTCGGGCACGCGCGTCGCAACCTCAGGCGACCTGTCCACGGCGACGTACGAGCCTGCCGAGCAGCATGGCTCGGGTGGCGGCTTCTCGTCTGCGCCACTGACTGCCACGTACACGGCGGTGCCGGGCATCTACTACATCGCCTGGCGCTTCATCTACAACACCACGACCGGCGACGGTCCGATGCTCCTCCAGTACGAGAACAGCGCAGGAGCGCCGCCGAACAGCTTCGGGTACACCCCGGTCAAGCGGTTCGGCGTGATCAGCGGGACGACGCTCACAGCGTCTCCCACGTCCCTCACCGTCAGCTCGTTCGAGAACGGAGCGAACCGCTTCTGGGCCGCGCTGGCGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)