Protein

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Genbank accession
YP_009789504.1 [GenBank]
Protein name
putative large intein domain protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARFRVRNKANNGWLDCVDTPMFVRTQEGDWAPLLPDKFSVRNLYGKRWHDIDDSYDPTYDDPCLNLETGECGGGPTSTTKGSGTGDGSGGPTYDQLIGYPPGFDLPDAGRVGFGLLNNYAPPTGRAINRPGIKTFESYDPVGASSRTGLGTYANPNVPYASVHGRGAVITETVFAMPAVEGYVELMFASYVASGMSVDVYHMGVRVASTCGKVAGRSRIKFQFDPDADDMRIMVRVRTEAGAHWSLQVFPPRLVVTSDRGNLALDSQLSYDVINFPDVVHPDYIGTPVFPAPCHASVYPIAARIQDANAFEYYHYIGTVAGWMYLDFTSWETYDFIEVYHSGRRIATTLDAQTANGYLYFLFDPRGSNCYDLMIRVVSKDFGSATSLQSNYYNLYCPSERGAREYRHPCESYTVSSMGHPVTEDCFALGAQTDIRAGLIQVNSGNFATKFEVFDQSMNLLDTEILGANSTGTLEFWKYPEHVLRQNIVVRVTAAIGCDWQYFVYCPVQPPKIDVSDFLVPYRCVVIEGGSAQPPIADDLPWFCYAFDQVDGRGVSGSVANLKAWDGSYMNFWGGSQGWFKFNNSFVKPIKQITFQWVFDGINGAWHDMSIYERYAGEAAAQRVYNSANVMQTITFDTNIPAGEEVWLYAFGGGDRGNSNDVTYLAISNIVFG
Physico‐chemical
properties
protein length:673 AA
molecular weight: 74588,61300 Da
isoelectric point:4,91870
aromaticity:0,13670
hydropathy:-0,21605

Domains

Domains [InterPro]
DC_2160
ATT
1–266
DC_2160
DC_1307
STR
250–638
DC_1307
YP_009789504.1
1 673
Architecture
ATT
STR
ATT 1-266 | STR 267-638 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009789504.1
1 673
Domain Start End Length (AA) Confidence
N-terminal 1 35 35 0,5398
Central domain 36 234 200 0,8538
C-terminal 235 673 438 0,4022
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-35
Central
36-234
C-terminal
235-673

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EamM_Yoloswag
[NCBI] 		1958956 Uroviricota > Caudoviricetes > Yoloswagvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009789504.1 [NCBI]
Genbank nucleotide accession
NC_047815 [NCBI]
CDS location
range 62657 -> 64678
strand -
CDS
ATGGCACGCTTTCGCGTAAGAAATAAAGCCAATAACGGCTGGCTCGATTGCGTCGATACTCCGATGTTTGTGCGCACGCAAGAGGGAGATTGGGCACCGCTGTTGCCTGACAAGTTCAGCGTGCGCAATCTGTACGGTAAACGTTGGCATGATATTGATGACAGCTATGACCCGACGTATGATGATCCGTGTCTCAACCTTGAAACAGGTGAGTGTGGCGGTGGCCCTACTTCAACAACTAAGGGTAGTGGTACTGGCGATGGTAGTGGTGGCCCTACGTATGACCAGCTTATCGGATATCCTCCTGGCTTTGACTTGCCTGATGCTGGACGTGTTGGCTTTGGTCTACTCAATAACTACGCGCCGCCGACTGGTCGTGCTATCAATCGTCCTGGTATTAAAACGTTCGAGTCATACGATCCCGTCGGAGCAAGCTCACGTACTGGACTTGGTACCTATGCTAACCCGAATGTACCGTATGCTAGTGTTCATGGCAGGGGCGCAGTAATCACAGAAACTGTGTTTGCTATGCCTGCTGTTGAGGGATATGTCGAGCTAATGTTCGCATCCTATGTAGCTAGCGGCATGAGCGTTGACGTGTATCATATGGGTGTGCGTGTTGCATCAACTTGCGGTAAGGTAGCTGGTCGTAGTCGTATCAAATTCCAGTTCGATCCAGATGCTGATGACATGCGTATCATGGTTCGTGTGCGTACAGAGGCTGGTGCTCACTGGTCGCTGCAAGTGTTCCCGCCGCGCCTTGTTGTAACCTCTGATCGTGGTAATTTAGCACTAGACAGTCAGCTTAGTTATGATGTTATCAACTTCCCAGATGTTGTGCATCCTGACTATATCGGTACTCCAGTATTCCCAGCACCGTGTCACGCATCTGTTTATCCTATTGCTGCTCGCATACAGGATGCTAATGCGTTTGAGTATTATCACTATATCGGTACGGTTGCTGGTTGGATGTATCTTGACTTCACATCGTGGGAGACCTATGACTTTATTGAGGTCTATCATAGTGGTCGTCGTATTGCTACAACGCTTGACGCACAAACAGCAAACGGTTATCTCTACTTCCTGTTTGACCCACGTGGCAGTAACTGCTATGACCTGATGATTCGTGTAGTCAGCAAGGATTTTGGTTCAGCAACTAGTTTACAGTCGAACTACTACAATCTGTACTGCCCGTCCGAACGTGGTGCGCGTGAGTACAGACACCCTTGTGAAAGCTATACAGTCAGCAGCATGGGTCATCCTGTTACAGAAGACTGCTTTGCACTTGGTGCGCAGACAGATATTCGTGCTGGTTTGATTCAGGTCAACAGTGGCAACTTCGCTACCAAGTTTGAAGTGTTTGATCAGAGCATGAACCTGCTTGACACAGAGATTCTTGGAGCTAACTCTACTGGTACGCTTGAGTTCTGGAAGTATCCCGAACATGTGCTGCGTCAGAACATCGTGGTGCGAGTGACGGCAGCTATTGGTTGTGACTGGCAATACTTTGTTTACTGTCCTGTGCAGCCGCCTAAGATTGACGTCAGCGACTTCCTTGTTCCTTATCGTTGCGTTGTTATTGAGGGAGGTTCAGCACAGCCGCCAATAGCTGATGATTTACCTTGGTTCTGTTACGCATTCGATCAAGTTGATGGTCGCGGTGTTAGTGGCAGTGTAGCGAATCTCAAAGCGTGGGATGGCAGCTACATGAACTTCTGGGGTGGCTCTCAAGGCTGGTTCAAGTTCAACAACAGCTTCGTCAAGCCTATCAAGCAGATCACATTCCAGTGGGTGTTTGATGGTATCAACGGAGCATGGCATGATATGTCTATCTATGAGCGTTATGCTGGTGAGGCTGCTGCACAGCGGGTATACAACAGCGCCAACGTCATGCAGACAATTACGTTTGATACCAACATTCCAGCAGGCGAAGAAGTTTGGCTGTACGCGTTTGGTGGTGGAGATCGCGGTAACTCGAATGATGTGACCTATCTTGCAATTTCAAACATCGTATTTGGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
131a611ae286ae7c194c06ee1f60abc3e939d4217b6a400fcda6465acde7f56d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4587
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50