Protein

View in Explore
Genbank accession
YP_009781971.1 [GenBank]
Protein name
gpORF096
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,65
Protein sequence
MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDRPDMESLDVVLHVVPLDTSSKVVQHLYTLSTNNNQIKMLYRFVSGNSSSEWQFIQGLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTSPSHKELWTGAQSFLSTGTTKNLSDDISNYSYVEVYTTHKTTEKTKGNDNTGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPITEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:458 AA
molecular weight: 50423,73790 Da
isoelectric point:6,01785
aromaticity:0,09607
hydropathy:-0,40087

Domains

View on InterPro
Domain architecture
YP_009781971.1
1 458 aa
RBD 337–458
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009781971.1
1 458 aa
Domain Start End Length (AA) Confidence
N-terminal 1 320 320 0,4527
Central domain 321 447 128 0,0196
C-terminal 448 458 10 0,9952
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Staphylococcus phage A5W [NCBI] · taxon 516541
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Staphylococcus aureus [NCBI] · taxon 1280
cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Coding sequence (CDS)

Genbank protein accession
YP_009781971.1 [NCBI]
Genbank nucleotide accession
NC_047728 [NCBI]
CDS location
range 84027 -> 85403
strand +
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTACTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACCGATGATTTAGTTTATAATTTTAATAAATCACAGAAAATTAAACTAACTGATGATAAAGGATTAACTAAATCTTATGGAAACATAACAGCCCTTAGAGATATAAAAGAACCTGGTTATTACTATATAGGTGCTAGAACATTAGCAACATTATTAGATAGACCTGATATGGAATCTCTTGATGTTGTTTTACATGTAGTACCTCTTGATACTTCTAGTAAGGTAGTTCAACATTTATATACACTATCTACTAACAATAACCAAATTAAAATGTTATATAGATTTGTCTCAGGAAACTCTAGTTCAGAATGGCAATTTATTCAAGGATTACCTAGTAATAAAAATGCTGTTATATCAGGAACTAATATTTTAGATATAGCTTCACCAGGTGTTTACTTTGTTATGGGAATGACAGGAGGAATGCCTAGTGGAGTAAGCTCCGGATTTTTAGACTTAAGTGTAGATGCTAATGATAATAGATTAGCTAGACTAACTGATGCTGAAACCGGTAAAGAATATACTAGCATTAAGAAACCTACAGGAACATACACAGCCTGGAAAAAAGAATTTGAGCCAAAAGATATGGAGAAATATCTACTAAGTAGTATTAGAGACGATGGTAGTGCATCATTCCCACTCCTAGTTTATACTAGTGATAGTAAAACATTTCAACAAGCTATTATAGACCATATAGATAGAACAGGTCAAACAACCTTTACTTTCTATGTTCAAGGCGGTGTATCCGGTTCCCCTATGTCGAATAGTTGTCGAGGGTTATTCATGTCAGACACACCTAATACTTCTAGTTTACATGGTGTTTACAATGCTATAGGTACAGATGGTAGAAATGTAACAGGTTCAGTGGTAGGTAGTAATTGGACTTCACCAAAAACATCCCCTTCTCATAAAGAATTATGGACAGGAGCACAATCATTCTTATCTACAGGAACTACTAAGAATTTATCAGATGATATTAGTAACTACTCTTATGTAGAAGTTTATACTACACATAAGACAACAGAGAAGACTAAAGGTAATGACAATACAGGAACTATATGTCATAAGTTTTATTTAGATGGTAGTGGAACTTACGTTTGTTCAGGTACATTTGTTTCCGGGGATAGAACCGATACAAAACCCCCTATCACGGAGTTTTATAGAGTAGGTGTATCTTTTAAAGGTTCTACATGGACTCTTGTAGATAGTGCAGTACAAAATAGTAAAACTCAATACGTTACAAGAATTATAGGTATTAATATGCCATAG

Genome Context

Tertiary structure

YP_009781971.1
1 / 4
Structure ID
Source
Method
Resolution
Oligomeric state

Literature

Title Authors Date PMID Source
Structural and functional characterization of polyvalent Staphyloccocal bacteriophage A5W Ulatowska,M.I., Weber-Dabrowska,B., Sadowy,E., Krzyszton-Russjan,J., Gorski,A. and Lobocka,M.B. 2012-01 — GenBank