Protein

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Genbank accession
YP_009781971.1 [GenBank]
Protein name
gpORF096
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDRPDMESLDVVLHVVPLDTSSKVVQHLYTLSTNNNQIKMLYRFVSGNSSSEWQFIQGLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTSPSHKELWTGAQSFLSTGTTKNLSDDISNYSYVEVYTTHKTTEKTKGNDNTGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPITEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:458 AA
molecular weight: 50423,73790 Da
isoelectric point:6,01785
aromaticity:0,09607
hydropathy:-0,40087

Domains

Domains [InterPro]
DC_1773
STR
8–247
DC_1773 IPR057110
DC_0448
STR
195–457
DC_0448
YP_009781971.1
1 458
Architecture
STR
STR 8-458
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009781971.1
1 458
Domain Start End Length (AA) Confidence
N-terminal 1 320 320 0,4527
Central domain 321 447 128 0,0196
C-terminal 448 458 10 0,9952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-320
Central
321-447
C-terminal
448-458

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage A5W
[NCBI] 		516541 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009781971.1 [NCBI]
Genbank nucleotide accession
NC_047728 [NCBI]
CDS location
range 84027 -> 85403
strand +
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTACTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACCGATGATTTAGTTTATAATTTTAATAAATCACAGAAAATTAAACTAACTGATGATAAAGGATTAACTAAATCTTATGGAAACATAACAGCCCTTAGAGATATAAAAGAACCTGGTTATTACTATATAGGTGCTAGAACATTAGCAACATTATTAGATAGACCTGATATGGAATCTCTTGATGTTGTTTTACATGTAGTACCTCTTGATACTTCTAGTAAGGTAGTTCAACATTTATATACACTATCTACTAACAATAACCAAATTAAAATGTTATATAGATTTGTCTCAGGAAACTCTAGTTCAGAATGGCAATTTATTCAAGGATTACCTAGTAATAAAAATGCTGTTATATCAGGAACTAATATTTTAGATATAGCTTCACCAGGTGTTTACTTTGTTATGGGAATGACAGGAGGAATGCCTAGTGGAGTAAGCTCCGGATTTTTAGACTTAAGTGTAGATGCTAATGATAATAGATTAGCTAGACTAACTGATGCTGAAACCGGTAAAGAATATACTAGCATTAAGAAACCTACAGGAACATACACAGCCTGGAAAAAAGAATTTGAGCCAAAAGATATGGAGAAATATCTACTAAGTAGTATTAGAGACGATGGTAGTGCATCATTCCCACTCCTAGTTTATACTAGTGATAGTAAAACATTTCAACAAGCTATTATAGACCATATAGATAGAACAGGTCAAACAACCTTTACTTTCTATGTTCAAGGCGGTGTATCCGGTTCCCCTATGTCGAATAGTTGTCGAGGGTTATTCATGTCAGACACACCTAATACTTCTAGTTTACATGGTGTTTACAATGCTATAGGTACAGATGGTAGAAATGTAACAGGTTCAGTGGTAGGTAGTAATTGGACTTCACCAAAAACATCCCCTTCTCATAAAGAATTATGGACAGGAGCACAATCATTCTTATCTACAGGAACTACTAAGAATTTATCAGATGATATTAGTAACTACTCTTATGTAGAAGTTTATACTACACATAAGACAACAGAGAAGACTAAAGGTAATGACAATACAGGAACTATATGTCATAAGTTTTATTTAGATGGTAGTGGAACTTACGTTTGTTCAGGTACATTTGTTTCCGGGGATAGAACCGATACAAAACCCCCTATCACGGAGTTTTATAGAGTAGGTGTATCTTTTAAAGGTTCTACATGGACTCTTGTAGATAGTGCAGTACAAAATAGTAAAACTCAATACGTTACAAGAATTATAGGTATTAATATGCCATAG

Genome Context

Genome Context

Tertiary structure

1 / 4
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Structural and functional characterization of polyvalent Staphyloccocal bacteriophage A5W Ulatowska,M.I., Weber-Dabrowska,B., Sadowy,E., Krzyszton-Russjan,J., Gorski,A. and Lobocka,M.B. 2012-01 — GenBank