Phage RBP Database

Genbank accession

BDU13746.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,41

Protein sequence

MFPIPVMMIMTDAGVIPLPAGIVKKVITLDYPDNAGNSNSSLALLLNDGRLFMQGANLFGEIADGTRSSRFNSFYLASTVASDVFTADRCFVIKLQSGGWQYAGLTAGLVGANAAGGSDVCATSWTSFPSSITGTITLANLKEVKGGYNNTLWLMTTGVLYGSGQNTVGSLGSSNTNQISTPRQITSVALAFDAGYNQCTYLNNVGALRVCGTSRGVAGNNSTTTAFVTATISATETVFVKDYINTVSQTIVIGDTAAGAGSINYLYVRSNTATTYTKLENFSTGFTSWVIPPSRHSFFVGINNTLWAIGKNYTANLGLGYASASTDPLQVGKPIKPEGVASWNLNKLTSVHTLNMDVTNQLGYQGTFIVYDGNLFYSGAWVDGKASYLFNSGLNSTSFSPITTDTVTGTTLATGLSTDSLGICIVGGTKQLTYSVSPSGGKLFNEAYTTSAPAYMTISSSGLMTFVAEGGFDAGMTALNAAGTTLSDSSGGYASTLEVYTPSLSAMDEGTTQTLVAEITPAGAENLPGMVVEYFSNDPTVATVDPVTGVITAVTDGDCRIGCRATYQGVVTAEDSSYLAVNAVAGKELAPSPSSSLTVLNGYFNHSTDGAITFPNLSGTVTPANFVVKVDDVVVPTNKVIFRNKAFSTVDSYPAGEYRLAIDFASAAVVNSVEVSVEANPNLLELWGGNRISYSTSPASQFLKGCVNLRRITSDCFSNTSYTGTSVSGIFSGCTSLKAVPEGLFSDTLFPSITTMSSTFEGCTSLVSIPSDLFKNLSKVTRYSYTFKDCTALAEVPVGMFDDIPTKVTSFTAMFQGCLALTDFNKIFNDNPGLTVCGKRGALSSFFSGCTNLTGSGVTLTTTLGGAANSYLFRYCTKLSDYNSIPSGYK

Physico‐chemical properties

protein length:	890 AA
molecular weight:	93257,63050 Da
isoelectric point:	4,90659
aromaticity:	0,10000
hydropathy:	0,13090

Domain architecture

BDU13746.1

1 890 aa

STR 33–355 · STR 494–582 · STR 669–883 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR009091
STR

IPR009091 G3DSA:2.60.40.1080 IPR032675

IPR009091
STR

IPR009091 IPR008964

IPR003343
STR

IPR003343

BDU13746.1

1890 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0065
STR

DC_0065 DC_0179 DC_0356 DC_0669

DC_1711
RBD

DC_1711 DC_0669

BDU13746.1

1890 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR009091	STR	IPR009091	33	355	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	40	335	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	494	582	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR008964	RBD	IPR008964	501	569	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits
IPR003343	STR	DC_0008	506	561	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR032675	STR	IPR032675	669	883	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

BDU13746.1

1 890 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	21	21	0,9159
Central domain	22	243	223	0,5980
C-terminal	244	890	646	0,0757

Note: Constraints were applied during segmentation.
Fixed 19 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage phiWec190 [NCBI] · taxon 2992786

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

BDU13746.1 [NCBI]

Genbank nucleotide accession

LC739539 [NCBI]

CDS location

range 80740 -> 83412
strand +

CDS

ATGTTTCCAATCCCAGTAATGATGATTATGACAGATGCGGGAGTAATACCACTTCCAGCAGGGATTGTCAAGAAAGTAATAACTTTAGATTACCCAGATAACGCGGGAAATTCTAACAGTAGTCTGGCCCTTTTGCTCAACGATGGGCGACTGTTCATGCAAGGTGCCAACCTTTTTGGGGAGATCGCAGATGGAACGCGTAGCTCTCGTTTCAATAGCTTCTACCTGGCTTCAACGGTAGCTTCGGATGTGTTTACAGCAGATCGTTGCTTCGTTATTAAACTACAAAGCGGTGGATGGCAATACGCAGGACTGACAGCAGGTTTGGTAGGTGCAAATGCCGCAGGAGGATCAGATGTTTGTGCGACTTCTTGGACAAGTTTCCCATCTTCAATTACAGGAACAATCACCTTAGCCAACTTGAAAGAAGTCAAGGGGGGTTACAATAACACGTTGTGGTTGATGACAACAGGAGTTCTCTACGGATCAGGACAAAATACTGTTGGGAGTTTAGGTTCAAGTAACACAAACCAAATATCTACTCCACGTCAGATAACAAGCGTTGCTTTGGCGTTTGATGCAGGATACAACCAATGTACTTACCTCAATAATGTAGGAGCACTTCGTGTGTGCGGGACAAGTAGAGGGGTTGCAGGGAACAACAGTACAACCACAGCCTTCGTTACAGCTACAATCTCGGCTACTGAAACAGTGTTTGTTAAGGATTACATCAACACAGTATCCCAAACGATTGTTATTGGAGATACAGCAGCAGGGGCAGGATCAATAAACTACCTGTATGTTCGTTCCAATACGGCAACAACGTATACAAAGCTTGAGAACTTCTCAACAGGTTTTACATCATGGGTAATACCTCCGAGTAGACATTCCTTCTTTGTGGGGATAAATAACACTTTGTGGGCCATTGGTAAGAACTACACAGCGAATCTTGGCTTAGGATACGCTTCTGCGAGCACAGACCCACTACAAGTCGGTAAACCAATCAAACCTGAAGGTGTGGCCTCTTGGAACCTTAACAAGCTCACAAGCGTACACACGCTCAATATGGACGTTACTAATCAGTTGGGCTACCAGGGAACTTTCATTGTGTACGATGGCAACCTCTTCTACTCCGGTGCTTGGGTAGACGGAAAAGCTTCTTACCTGTTCAACAGCGGTCTTAACTCTACATCTTTCTCGCCTATAACTACAGATACTGTAACAGGGACTACCCTGGCAACAGGATTGTCTACAGATTCTTTAGGTATTTGTATTGTTGGTGGGACCAAACAGTTAACCTATTCAGTAAGTCCTTCAGGAGGTAAGCTCTTCAACGAAGCTTACACAACATCTGCCCCAGCTTATATGACGATATCTTCCTCTGGTTTGATGACGTTTGTTGCTGAAGGTGGTTTTGATGCAGGGATGACAGCATTGAACGCAGCAGGAACAACTTTATCAGATAGCTCTGGAGGTTATGCTTCAACGTTGGAAGTGTATACTCCAAGTCTTTCAGCTATGGATGAAGGGACAACGCAGACATTGGTGGCAGAAATAACTCCAGCAGGGGCAGAGAACCTCCCTGGCATGGTTGTTGAGTATTTCTCTAACGACCCTACGGTAGCAACAGTTGACCCCGTTACAGGCGTTATTACAGCGGTTACTGATGGGGATTGTCGTATTGGTTGTAGAGCAACCTATCAAGGCGTGGTAACTGCGGAAGATAGTTCTTATTTAGCGGTAAATGCTGTCGCGGGAAAGGAGTTAGCTCCATCTCCGAGTAGTAGTTTAACGGTTCTAAATGGATATTTCAACCACTCGACAGATGGGGCGATTACGTTCCCAAATTTATCGGGTACTGTCACACCAGCTAACTTTGTAGTTAAGGTGGACGACGTTGTAGTTCCTACAAATAAAGTGATATTTAGAAACAAAGCTTTTTCTACAGTGGATAGTTATCCAGCAGGAGAATATCGACTGGCTATTGACTTTGCAAGTGCTGCTGTAGTTAATAGTGTTGAAGTGTCTGTAGAAGCAAACCCAAATCTTTTAGAACTGTGGGGCGGTAACAGAATTAGTTATTCTACAAGCCCAGCTTCGCAATTCTTGAAAGGTTGTGTCAACTTAAGACGAATAACGTCAGATTGTTTTAGCAATACATCTTATACTGGAACATCTGTGAGCGGTATCTTCTCTGGTTGCACAAGTTTGAAAGCTGTTCCTGAAGGTTTGTTTAGTGACACTCTGTTCCCTTCGATAACAACAATGTCAAGTACGTTTGAAGGTTGCACATCTTTGGTGTCTATTCCTTCCGATTTGTTTAAGAATCTATCTAAAGTTACAAGATACTCTTACACTTTTAAAGATTGTACGGCTTTGGCAGAAGTTCCAGTAGGAATGTTTGATGATATTCCGACGAAAGTAACTTCTTTCACAGCTATGTTCCAAGGTTGTTTAGCACTTACAGATTTTAATAAAATCTTTAATGACAACCCAGGATTAACAGTTTGTGGTAAACGTGGAGCCTTATCTTCATTCTTTAGTGGATGTACCAATTTGACTGGATCAGGTGTGACATTAACAACCACGTTAGGAGGTGCAGCTAACAGTTACCTGTTTAGATATTGCACAAAACTTTCTGACTATAACAGCATTCCTTCGGGTTATAAATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)