Phage RBP Database

Genbank accession

QGK90494.1 [GenBank]

Protein name

tail tubular protein B

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MILEGVYPSFLKGVSQQTPQERSDGQLGAQLNLLSDAVTGLRRRGGVKFQAKLAGIPNSSYIRLIDINGINYIMIVDTVTGTLKIYNFNGTLIKEHQTDYLKASNGKASLRSTVSRNNCFVLNTEQVITKTLIGGSNPTPNPSTMGYISIRSGQFSKMYSVDVKSGTYSVSLQVSTHGTDASLASPEYVASKFLEGIQADSTLNSRYTVVREGSTVALKAKSVTDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPNILDKYIIAVGTVGNSAYYQYNADSSTWKECGVYEAPYKFTNEPIYWYFDDTDTIQVKSLDIKPRAAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTTVEELQDDDPIEVSSTALSAAQFEYAVPYNKDLVLLSQNQQAVIPANSTVLTPKTAVIYPSSKANISMASEPQVVSRSLYYTYQRGTDYYQVGEMIPNAYSDAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDQKELLVHQYLWAGEDRPLMSFHKWALPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPMPFLDIYQYVDIVDGEGTLPEFLPDGELVAAVYSSETMRHAMVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVAGSNSTVVDLTMTFKGTGEFEYHVSDAYGDVFDGETSAQAWSEAQLGYTRVNTVSDVKFPCGTLLNSTEFSIRTDGTTELNIISTGYNIRVPNRGRRRL

Physico‐chemical properties

protein length:	763 AA
molecular weight:	84161,45010 Da
isoelectric point:	4,90011
aromaticity:	0,10092
hydropathy:	-0,21651

Domain architecture

QGK90494.1

1 763 aa

TTP 7–761 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR058003
TTP

IPR058003

QGK90494.1

1763 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0058
STR

DC_0058

QGK90494.1

1763 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR058003	TTP	DC_0684	7	761	InterPro cluster	Tail tubular protein gp12	Central	High	Text match	1810 proteins / 1902 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QGK90494.1

1 763 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	139	139	0,9910
Central domain	140	338	200	0,1052
C-terminal	339	763	424	0,1911

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Acinetobacter phage vB_AbaP_APK87 [NCBI] · taxon 2664209

Uroviricota Caudoviricetes Autographivirales Beijerinckvirinae Friunavirus

Host

Acinetobacter baumannii [NCBI] · taxon 470

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales

Genbank protein accession

QGK90494.1 [NCBI]

Genbank nucleotide accession

MN604239 [NCBI]

CDS location

range 27228 -> 29519
strand +

CDS

ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAGTGACGGACAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGTGGTGGAGTTAAATTCCAAGCCAAGTTAGCAGGTATCCCGAACAGTAGTTATATACGTTTGATTGATATCAACGGTATTAATTACATTATGATCGTAGATACTGTTACAGGTACTTTAAAAATTTATAATTTTAACGGTACATTAATTAAAGAACATCAAACAGATTACCTTAAAGCTTCCAACGGTAAGGCTAGTCTACGTAGTACAGTCTCCCGTAATAATTGTTTTGTATTAAACACTGAACAAGTTATTACTAAGACACTTATAGGTGGTTCTAATCCGACACCTAATCCAAGTACTATGGGTTATATCAGTATTAGGTCTGGTCAGTTCTCTAAGATGTATTCTGTAGACGTTAAGTCTGGAACCTACTCAGTAAGTTTACAGGTATCTACACACGGTACAGACGCATCCTTAGCATCTCCTGAATACGTTGCTTCTAAATTTTTAGAAGGGATTCAGGCAGACTCTACGCTAAATAGTAGATATACCGTTGTACGTGAGGGTAGTACGGTTGCATTAAAAGCTAAGTCTGTTACAGACACTAACTTATTAGTAATAGAATCGGGTACAGGTAGTACTTATATTCAAACTAGTAATTCTAGCCGTGTACAAGGTAAGCAAGACATTATTGCTAATCTACCTAATATCTTAGATAAATATATTATTGCAGTAGGTACAGTCGGTAATTCGGCTTACTATCAATATAATGCGGACTCTAGCACTTGGAAAGAGTGTGGTGTATATGAAGCACCTTATAAGTTCACTAACGAACCTATTTACTGGTACTTTGACGATACAGACACAATACAGGTTAAAAGCTTAGATATTAAACCACGTGCAGCAGGTGATGACGATAATAACCCATTACCTAAGTTTGTGGATTTTGGTATTACAGGTATTAGTGCTTATCAATCACGGTTGGTGTTGTTGAGCGGTTCATATGTGAATATGAGCGCAACAGCAGACTTCAATGTGTATATGCGTACCACTGTAGAGGAATTACAAGATGACGACCCTATTGAAGTGTCTAGTACTGCTTTAAGCGCTGCACAGTTTGAGTATGCTGTTCCGTATAATAAAGATTTAGTTTTATTATCACAGAACCAACAAGCTGTTATTCCAGCCAATAGCACTGTACTTACACCTAAGACAGCAGTTATCTACCCAAGTTCAAAAGCTAACATTAGTATGGCTAGTGAACCACAGGTTGTGTCGCGTAGTTTGTATTACACTTATCAACGCGGTACAGATTATTATCAAGTTGGTGAGATGATCCCTAATGCTTACTCAGATGCACAATACTACGCACAGAACTTAGCAGACCATATCCCGTTATATGCTACAGGTGTTTGTACTTCAATCACAGGTAGTACAACAGATAATATGGCGGTATTTAGTTCGGACCAGAAAGAGTTACTTGTACATCAATACTTGTGGGCAGGTGAGGATCGACCATTAATGAGTTTCCATAAATGGGCACTACCTTATGATGTGCTTCACGTACAATTCCTACAAGAGTACTTAGTATTGTTTATGGATGTTGGTGACGATTTAGTGGTAGGTACTATTAATGTACAGCTAAACCAACTAGACAATAAACCTATGCCATTTTTAGATATTTATCAATACGTAGATATTGTGGACGGTGAGGGAACATTACCAGAGTTCTTACCTGATGGTGAGCTAGTGGCTGCTGTATACAGTTCTGAGACCATGCGTCACGCTATGGTCCAATATGAAATCGAAGGTACTAAGATTAAGTGTCAATTCAATGGACGTATTTATCTAGGTGTACCTTATGAAAGTTCACTCACATTAACACCTCCCTTTGTTAAAGATGATAAAGGTCGAGTAGTTGCTGGTAGTAACAGTACAGTTGTCGATCTTACAATGACATTCAAGGGAACAGGTGAGTTTGAGTACCATGTTTCTGATGCTTATGGTGATGTGTTTGATGGTGAAACGTCTGCACAAGCTTGGTCAGAAGCACAACTAGGGTATACGAGAGTAAACACAGTAAGTGATGTTAAGTTCCCATGTGGCACGTTATTAAATTCAACCGAGTTTAGTATCCGAACTGATGGTACAACAGAACTAAATATCATTAGCACTGGTTATAATATCCGTGTACCTAATAGAGGACGGAGACGTTTATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)