Protein

View in Explore
Genbank accession
WKC55582.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGSTVGGLPIWHSGTFPLVPVGNTLTYRGYKVYTENDKPQASNNDFVSKASGGQYLGVVAFKQGLQINATFTGGSDQNGLYSGDGDGATLSKANMDLVSWYGIGIRSSSGTNGRVLVINARNGDLNTQGNITVEKQISITTANPTDASHATRKSYVDGQINTVTTNANSRVLRAGDTMTGLLTAPQFASTGAASRPEHVPRLDQVITKGTIIDFGSY
Physico‐chemical
properties
protein length:222 AA
molecular weight: 23309,57690 Da
isoelectric point:8,80259
aromaticity:0,07207
hydropathy:-0,30315

Domains

Domains [InterPro]
DC_0466
STR
1–219
DC_0466
IPR005601
STR
60–184
IPR005601
WKC55582.1
1 222
Architecture
STR
STR 1-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKC55582.1
1 222
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,3213
Central domain 199 211 14 0,0266
C-terminal 212 222 10 0,8806
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-211
C-terminal
212-222

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage R4_1
[NCBI] 		3059689 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKC55582.1 [NCBI]
Genbank nucleotide accession
OR138017.1 [NCBI]
CDS location
range 81277 -> 81945
strand -
CDS
ATGGCAGATTTAAAAGCTGGTTCTACAGTCGGGGGTTTACCTATTTGGCACTCCGGCACATTTCCGCTGGTTCCGGTTGGTAATACTCTAACCTATCGCGGATATAAGGTTTATACTGAAAACGATAAACCGCAAGCATCAAATAACGACTTCGTTTCTAAAGCAAGCGGTGGTCAATATTTGGGTGTAGTTGCCTTTAAACAGGGGCTACAAATTAACGCTACTTTCACAGGCGGAAGTGACCAGAACGGTTTATATTCTGGTGATGGTGATGGCGCGACATTATCAAAAGCCAACATGGATCTTGTATCATGGTATGGTATTGGTATTCGTTCATCTTCCGGTACTAATGGTCGCGTATTAGTCATCAACGCTCGAAATGGTGATTTAAACACTCAGGGTAATATTACGGTTGAAAAACAAATCAGTATTACAACCGCTAACCCTACTGACGCAAGTCATGCAACACGAAAAAGTTATGTTGATGGACAGATAAATACTGTCACAACAAATGCTAATAGCAGGGTATTACGCGCTGGCGATACAATGACAGGGCTATTAACTGCCCCGCAATTCGCGAGCACAGGCGCGGCTTCCCGTCCCGAACACGTACCACGGCTCGACCAGGTAATTACTAAAGGGACTATCATAGATTTTGGATCTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3cb28c438349f3d7a524cefb01ca35227e73d583939fe7dabf5afb85b4b8a36
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7067
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50