Phage RBP Database

Genbank accession

WKC55582.1 [GenBank]

Protein name

long-tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect

Probability 0,77

TF

Evidence RBPdetect2

Probability 0,73

Protein sequence

MADLKAGSTVGGLPIWHSGTFPLVPVGNTLTYRGYKVYTENDKPQASNNDFVSKASGGQYLGVVAFKQGLQINATFTGGSDQNGLYSGDGDGATLSKANMDLVSWYGIGIRSSSGTNGRVLVINARNGDLNTQGNITVEKQISITTANPTDASHATRKSYVDGQINTVTTNANSRVLRAGDTMTGLLTAPQFASTGAASRPEHVPRLDQVITKGTIIDFGSY

Physico‐chemical properties

protein length:	222 AA
molecular weight:	23309,57690 Da
isoelectric point:	8,80259
aromaticity:	0,07207
hydropathy:	-0,30315

Domain architecture

WKC55582.1

1 222 aa

STR 60–184 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005601
STR

IPR005601

WKC55582.1

1222 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0466
STR

DC_0466

WKC55582.1

1222 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005601	STR	DC_0859	60	184	InterPro cluster	Tail fibre protein p36	Central	Low	Positional only	349 proteins / 351 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WKC55582.1

1 222 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	198	198	0,3213
Central domain	199	211	14	0,0266
C-terminal	212	222	10	0,8806

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage R4_1 [NCBI] · taxon 3059689

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Klebsiella pneumoniae [NCBI] · taxon 573

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

WKC55582.1 [NCBI]

Genbank nucleotide accession

OR138017.1 [NCBI]

CDS location

range 81277 -> 81945
strand -

CDS

ATGGCAGATTTAAAAGCTGGTTCTACAGTCGGGGGTTTACCTATTTGGCACTCCGGCACATTTCCGCTGGTTCCGGTTGGTAATACTCTAACCTATCGCGGATATAAGGTTTATACTGAAAACGATAAACCGCAAGCATCAAATAACGACTTCGTTTCTAAAGCAAGCGGTGGTCAATATTTGGGTGTAGTTGCCTTTAAACAGGGGCTACAAATTAACGCTACTTTCACAGGCGGAAGTGACCAGAACGGTTTATATTCTGGTGATGGTGATGGCGCGACATTATCAAAAGCCAACATGGATCTTGTATCATGGTATGGTATTGGTATTCGTTCATCTTCCGGTACTAATGGTCGCGTATTAGTCATCAACGCTCGAAATGGTGATTTAAACACTCAGGGTAATATTACGGTTGAAAAACAAATCAGTATTACAACCGCTAACCCTACTGACGCAAGTCATGCAACACGAAAAAGTTATGTTGATGGACAGATAAATACTGTCACAACAAATGCTAATAGCAGGGTATTACGCGCTGGCGATACAATGACAGGGCTATTAACTGCCCCGCAATTCGCGAGCACAGGCGCGGCTTCCCGTCCCGAACACGTACCACGGCTCGACCAGGTAATTACTAAAGGGACTATCATAGATTTTGGATCTTATTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)