Phage RBP Database

Genbank accession

WKC55582.1 [GenBank]

Protein name

long-tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect

Probability 0,77

TF

Evidence RBPdetect2

Probability 0,73

Seq2Symm

C3 confidence 0,926

C3	0,926
C1	0,812
I	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADLKAGSTVGGLPIWHSGTFPLVPVGNTLTYRGYKVYTENDKPQASNNDFVSKASGGQYLGVVAFKQGLQINATFTGGSDQNGLYSGDGDGATLSKANMDLVSWYGIGIRSSSGTNGRVLVINARNGDLNTQGNITVEKQISITTANPTDASHATRKSYVDGQINTVTTNANSRVLRAGDTMTGLLTAPQFASTGAASRPEHVPRLDQVITKGTIIDFGSY

Physico‐chemical properties

protein length:	222 AA
molecular weight:	23309,57690 Da
isoelectric point:	8,80259
aromaticity:	0,07207
hydropathy:	-0,30315

Domain architecture

WKC55582.1

1 222 aa

STR 60–184 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005601
STR

IPR005601

WKC55582.1

1222 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0466
STR

DC_0466

WKC55582.1

1222 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005601	STR	DC_0859	60	184	InterPro cluster	Tail fibre protein p36	Central	Low	Positional only	349 proteins / 351 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WKC55582.1

1 222 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	198	198	0,3213
Central domain	199	211	14	0,0266
C-terminal	212	222	10	0,8806

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage R4_1 [NCBI] · taxon 3059689

Uroviricota Caudoviricetes Pantevenvirales Straboviridae Slopekvirus Klebsiella phage R4_1

Host

Klebsiella pneumoniae [NCBI] · taxon 573

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae

Genbank protein accession

WKC55582.1 [NCBI]

Genbank nucleotide accession

OR138017.1 [NCBI]

CDS location

range 81277 -> 81945
strand -

CDS

ATGGCAGATTTAAAAGCTGGTTCTACAGTCGGGGGTTTACCTATTTGGCACTCCGGCACATTTCCGCTGGTTCCGGTTGGTAATACTCTAACCTATCGCGGATATAAGGTTTATACTGAAAACGATAAACCGCAAGCATCAAATAACGACTTCGTTTCTAAAGCAAGCGGTGGTCAATATTTGGGTGTAGTTGCCTTTAAACAGGGGCTACAAATTAACGCTACTTTCACAGGCGGAAGTGACCAGAACGGTTTATATTCTGGTGATGGTGATGGCGCGACATTATCAAAAGCCAACATGGATCTTGTATCATGGTATGGTATTGGTATTCGTTCATCTTCCGGTACTAATGGTCGCGTATTAGTCATCAACGCTCGAAATGGTGATTTAAACACTCAGGGTAATATTACGGTTGAAAAACAAATCAGTATTACAACCGCTAACCCTACTGACGCAAGTCATGCAACACGAAAAAGTTATGTTGATGGACAGATAAATACTGTCACAACAAATGCTAATAGCAGGGTATTACGCGCTGGCGATACAATGACAGGGCTATTAACTGCCCCGCAATTCGCGAGCACAGGCGCGGCTTCCCGTCCCGAACACGTACCACGGCTCGACCAGGTAATTACTAAAGGGACTATCATAGATTTTGGATCTTATTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)