Protein

View in Explore
Genbank accession
QDK00659.1 [GenBank]
Protein name
putative baseplate hub protein
RBP type
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence Phold
Probability 1,00
Protein sequence
MKKILDSAREYLRTHNKIKTACLITLELPGSTGSSSAYIYLTDYFRDVRYNGILYTSGKVKSITTHKQNRDLSIGSLSFTITGTAEDEVLKLVQNGVSFLDRSISIHQAVIDEEGNILPVDSDTNGPLLYFRGKITGGGIKDNIGTSGISTSTITWNCSNQFYDFDRVNGRFTDDAAHRGLEIVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLQSKKKLFGLSRSYSMKKYYETVTKEVDIDFNLAAKFLPVVYGTQKIPGIPVFADTELHNPNIVYIVYAFCEGEIDGFLDFYFGDVPMICIDPNDSKSRTCFGTKKVAGDTMQRIASGQSSSEPSVHGQEYRYNDGNGDIRIWTYHGRADQSAADVLVNIAKEKGFYLQNMNENGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEVSAEVQGKKTKIYHSDGRVTADKTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTDAVGENRQIVQMNTILDTSESVFKNVQGLIESYGGAINNLSGQYRITVEKFSNTPLEIDFLDTYGDLELSDTTGRNKFNSVQASILDPALSWKTNSITFFNSIFKEQDKGLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLTFSLPYHFIGIEPNDPIAFTYGRYGWDKKYFLVDEVENSREGKINITLQEYGEDVFINSEQVDNSGNDIPDVSNNVLPPRDFMYTPTPGGQVGSIGKNGELSWLPSLTNNVVYYSIVHSGHANPYIIQQLETNPNLRMIQEIIGEPAGLAVFEIRAVDINGRRSSPVTLSVELNSAKNLSVVSNFRVTNTASGDASEFVGPDVKLAWDRIPEEDIIDGIFYTLEIYDNLDRLLRSVRIEDQYVYDYLLIYNKADYALHNEDALGINRKLRFRIRAEGDNGEQSVDWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107254,56230 Da
isoelectric point:5,08245
aromaticity:0,11275
hydropathy:-0,42139

Domains

Domains [InterPro]
IPR032876
594–686
IPR032876
QDK00659.1
1 949
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-26175V
[NCBI] 		2576482 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK00659.1 [NCBI]
Genbank nucleotide accession
MK907271 [NCBI]
CDS location
range 75738 -> 78587
strand -
CDS
ATGAAGAAAATTCTTGACAGTGCAAGAGAGTATTTAAGAACTCATAATAAAATAAAAACTGCATGTCTTATTACTCTTGAATTGCCTGGTTCTACTGGATCAAGTTCTGCATACATATATCTTACAGATTATTTTAGAGATGTAAGATATAATGGTATTCTTTATACCTCCGGTAAGGTTAAGTCTATAACAACACATAAACAAAATAGAGATCTTTCCATTGGTAGTCTTTCTTTTACTATCACAGGTACTGCGGAGGATGAAGTATTAAAACTAGTCCAAAATGGTGTATCCTTCCTAGATAGGTCTATCTCAATCCATCAAGCGGTTATTGATGAAGAAGGCAATATTCTTCCTGTAGATTCAGACACTAATGGTCCTTTACTTTACTTTCGTGGTAAAATTACTGGTGGAGGTATTAAGGATAACATTGGTACTTCTGGAATTAGCACATCTACTATCACATGGAACTGTTCAAATCAATTCTATGACTTTGATAGAGTAAACGGACGTTTCACAGATGATGCTGCCCATAGGGGACTTGAGATTGTTGCTGGCCAATTAGTTCCATCTAACGGTGCTAAGCGACCTGAATATCAAGAGGACTATGGATTCTTCCACGCTAATAAGAGTATCTCTATTCTTGCTAAGTATCAGGTTCAGGAAGAACGCTACAAGTTACAGTCTAAGAAAAAGTTATTTGGTCTTTCTAGAAGCTATAGCATGAAGAAATACTATGAGACTGTGACTAAGGAAGTTGATATCGATTTTAACTTAGCAGCTAAGTTCCTCCCGGTAGTGTATGGAACTCAGAAAATTCCTGGAATCCCCGTATTCGCAGATACTGAGCTGCATAACCCTAATATTGTATATATAGTGTATGCATTCTGTGAGGGTGAGATTGATGGATTTCTAGATTTCTACTTTGGTGATGTACCAATGATCTGTATTGATCCTAATGATAGTAAGTCTCGTACTTGCTTTGGTACTAAGAAAGTAGCTGGAGATACCATGCAACGTATTGCTTCTGGTCAATCAAGCTCTGAACCTTCTGTTCATGGACAGGAATATAGGTATAATGATGGTAATGGCGATATCCGTATCTGGACTTACCATGGTAGAGCAGACCAATCTGCTGCGGATGTTCTAGTTAACATTGCAAAAGAGAAAGGTTTCTATCTACAGAACATGAATGAGAATGGACCGGAATACTGGGACTCTCGTTATAAACTGTTAGATACTGCTTATGCTATTGTTCGCTTTACTATTAACGAAAACAGAACAGAAATTCCAGAAGTTAGTGCTGAAGTTCAAGGTAAGAAGACTAAAATCTACCATTCAGATGGTAGAGTAACTGCTGATAAGACTAGCTTAAACGGTATCTGGCAAACTCTGGACTACCTAACCTCTGATCGCTACGGTGCTAATATCACTATTGATCAGTTCCCCCTCCAGCAACTTATTCAAGAAGCAGCTATTCTGGATATAATTGATGAATCCTATCAGGTTTCTTGGCAACCCTATTGGAGATATGTTGGGTGGACTGATGCTGTAGGAGAGAATAGACAAATAGTTCAAATGAACACTATTCTTGATACCTCTGAGTCAGTATTTAAAAATGTGCAGGGATTGATAGAGTCTTATGGTGGTGCTATTAATAACTTATCTGGGCAATATAGAATAACTGTTGAGAAGTTCTCCAACACCCCACTGGAGATTGACTTCTTAGATACTTATGGTGATTTGGAGCTATCAGATACTACTGGTAGAAATAAGTTTAACTCAGTACAAGCCTCTATATTAGATCCCGCATTAAGCTGGAAGACTAACTCCATTACATTCTTTAACTCTATATTTAAGGAACAGGATAAAGGGTTAGATAAAAAACTTCAACTTTCTTTTGCAAATATCACTAACTACTATACTGCCCGTAGTTTTGCAGATAGAGAACTGAAAAAGTCTCGTTACTCACGAACTCTCACATTCTCATTACCATATCACTTCATAGGCATTGAGCCTAATGACCCCATTGCTTTTACTTATGGTCGTTATGGTTGGGATAAGAAATACTTCCTAGTTGATGAAGTTGAAAACTCTAGAGAAGGTAAGATTAATATTACACTGCAAGAGTATGGTGAGGATGTATTCATTAACTCCGAGCAGGTTGATAATAGTGGTAACGATATCCCTGATGTTAGTAATAATGTACTGCCTCCTAGAGACTTTATGTATACACCAACACCGGGTGGACAAGTAGGATCTATTGGTAAGAATGGTGAGTTATCTTGGCTTCCTAGCTTAACTAATAACGTTGTTTATTACTCCATCGTTCACTCTGGACATGCTAATCCTTATATCATACAGCAACTAGAAACTAATCCAAATCTACGAATGATCCAAGAAATTATTGGAGAACCTGCTGGTTTAGCAGTATTTGAGATTAGAGCTGTAGATATTAATGGTAGACGAAGTTCTCCAGTAACACTATCAGTAGAACTTAACTCTGCTAAAAACTTAAGCGTCGTTAGTAACTTCAGAGTTACTAATACAGCTTCAGGAGATGCATCGGAGTTTGTAGGACCAGACGTTAAGTTGGCCTGGGATAGAATTCCAGAAGAAGATATCATTGATGGAATCTTCTACACTCTCGAAATCTACGATAACCTAGATCGTTTATTAAGAAGTGTACGAATTGAAGATCAGTATGTCTACGATTATCTACTGATATACAATAAGGCAGACTATGCTCTTCATAACGAGGATGCTCTAGGTATTAATAGGAAGTTACGCTTCCGTATACGAGCAGAAGGTGATAATGGCGAGCAATCTGTGGATTGGGCATCTATTTAA

Tertiary structure

PDB ID
ac7c68951f04f280e24db360d18a56546003a550df7d977f2f915e425db9c012
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8206
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural Occurrence of Escherichia coli-Infecting Bacteriophages in Clinical Samples Pacifico,C., Hilbert,M., Sofka,D., Dinhopl,N., Pap,I.-J., Aspoeck,C., Carrico,J.A. and Hilbert,F. 2019 — GenBank