Protein

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Genbank accession
XYM57580.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,36
Seq2Symm
C3 confidence 0,993
C3 0,993
C1 0,019
D3 0,013
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAQWNKDEQSYRAQDTTNFEVVMIADEDGNPLNSYGSAANIPIAAGQLAGYSSIEKFGRNPNVATTIETIWEHGGIYEYLTTASQIFVYSASADDGVGQIGAIKVTVQGLDENWNIISEELTVNGAGSTLTFLRVYRAFITDAGSAGYNTGHIIISTLASGAGTVLADIGGDGTGVNFIGYGQTMLALYTVPAGKTAYVTQWTIGNGNYNTSTSAFLRTRLPVNGFVMTTSDTMSVSGGFHVKNYSIPLKFNEKTDIEVQAFNGGGTIVSSTFNVILVDN
Physico‐chemical
properties
protein length:280 AA
molecular weight: 29760,67280 Da
isoelectric point:4,50468
aromaticity:0,10357
hydropathy:-0,01500

Taxonomy

Phage
Synechococcus phage Sf-CH1b [NCBI] · taxon 3413213
Synechococcus phage Sf-CH1b
Host
Synechococcus [NCBI] · taxon 1129
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus

Coding sequence (CDS)

Genbank protein accession
XYM57580.1 [NCBI]
Genbank nucleotide accession
PV340850.1 [NCBI]
CDS location
range 112470 -> 113312
strand +
CDS
ATGGCACAATGGAATAAAGACGAACAGTCTTATAGAGCACAAGACACTACCAATTTCGAGGTAGTAATGATTGCCGATGAAGACGGCAACCCCCTCAATAGTTATGGATCTGCTGCTAATATTCCCATTGCTGCTGGACAATTAGCAGGTTATTCCTCTATTGAAAAGTTTGGTAGAAATCCTAATGTAGCTACCACTATTGAAACTATCTGGGAGCATGGTGGTATCTATGAATATCTAACGACTGCTTCTCAAATTTTTGTTTACTCTGCTTCAGCTGATGATGGTGTAGGGCAAATTGGTGCTATCAAAGTAACAGTTCAAGGTCTGGATGAAAATTGGAATATTATTTCAGAAGAACTAACAGTCAATGGTGCTGGATCTACTCTCACTTTCTTAAGAGTATACCGAGCATTTATTACCGATGCTGGATCTGCTGGGTATAATACAGGACATATTATCATCAGCACTCTAGCTAGTGGTGCTGGAACAGTATTAGCAGATATTGGTGGTGATGGAACTGGTGTTAATTTTATTGGTTATGGTCAAACAATGTTAGCATTGTATACAGTTCCTGCTGGTAAAACTGCTTATGTGACACAATGGACCATTGGTAATGGTAATTACAATACTTCAACATCTGCTTTCTTGAGAACTAGATTACCTGTCAATGGATTTGTTATGACTACGAGTGATACTATGTCAGTATCAGGTGGTTTTCATGTAAAGAACTATTCTATTCCATTAAAATTTAATGAAAAAACTGACATTGAAGTCCAAGCATTTAATGGTGGTGGAACAATTGTTAGTTCAACCTTCAATGTAATTCTTGTAGATAACTAA

Genome Context

Tertiary structure

XYM57580.1
ColabFold structure
Source ColabFold
pLDDT 90.4
Oligomeric state monomer
Download structure