Protein

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Genbank accession
XYM57580.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence Phold
Probability 1,00
Protein sequence
MAQWNKDEQSYRAQDTTNFEVVMIADEDGNPLNSYGSAANIPIAAGQLAGYSSIEKFGRNPNVATTIETIWEHGGIYEYLTTASQIFVYSASADDGVGQIGAIKVTVQGLDENWNIISEELTVNGAGSTLTFLRVYRAFITDAGSAGYNTGHIIISTLASGAGTVLADIGGDGTGVNFIGYGQTMLALYTVPAGKTAYVTQWTIGNGNYNTSTSAFLRTRLPVNGFVMTTSDTMSVSGGFHVKNYSIPLKFNEKTDIEVQAFNGGGTIVSSTFNVILVDN
Physico‐chemical
properties
protein length:280 AA
molecular weight: 29760,67280 Da
isoelectric point:4,50468
aromaticity:0,10357
hydropathy:-0,01500

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH1b
[NCBI] 		3413213 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM57580.1 [NCBI]
Genbank nucleotide accession
PV340850 [NCBI]
CDS location
range 112470 -> 113312
strand +
CDS
ATGGCACAATGGAATAAAGACGAACAGTCTTATAGAGCACAAGACACTACCAATTTCGAGGTAGTAATGATTGCCGATGAAGACGGCAACCCCCTCAATAGTTATGGATCTGCTGCTAATATTCCCATTGCTGCTGGACAATTAGCAGGTTATTCCTCTATTGAAAAGTTTGGTAGAAATCCTAATGTAGCTACCACTATTGAAACTATCTGGGAGCATGGTGGTATCTATGAATATCTAACGACTGCTTCTCAAATTTTTGTTTACTCTGCTTCAGCTGATGATGGTGTAGGGCAAATTGGTGCTATCAAAGTAACAGTTCAAGGTCTGGATGAAAATTGGAATATTATTTCAGAAGAACTAACAGTCAATGGTGCTGGATCTACTCTCACTTTCTTAAGAGTATACCGAGCATTTATTACCGATGCTGGATCTGCTGGGTATAATACAGGACATATTATCATCAGCACTCTAGCTAGTGGTGCTGGAACAGTATTAGCAGATATTGGTGGTGATGGAACTGGTGTTAATTTTATTGGTTATGGTCAAACAATGTTAGCATTGTATACAGTTCCTGCTGGTAAAACTGCTTATGTGACACAATGGACCATTGGTAATGGTAATTACAATACTTCAACATCTGCTTTCTTGAGAACTAGATTACCTGTCAATGGATTTGTTATGACTACGAGTGATACTATGTCAGTATCAGGTGGTTTTCATGTAAAGAACTATTCTATTCCATTAAAATTTAATGAAAAAACTGACATTGAAGTCCAAGCATTTAATGGTGGTGGAACAATTGTTAGTTCAACCTTCAATGTAATTCTTGTAGATAACTAA

Tertiary structure

PDB ID
f0045270a864d879db19a3abb171817c62be7913e93756ff495283bca0377549
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9044
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50