Protein

View in Explore
Genbank accession
QIO01163.1 [GenBank]
Protein name
receptor-binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,94
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,90
Seq2Symm
C1 confidence 0,873
C1 0,873
C3 0,111
C2 0,022
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSFFAGKFSDGKTVLSLNAANGGDINQHYSPNTNSIFHSDMPFVLVDGTYEAALGDAGNGYFVTQMPWDIINIKSNDPGRVILTAIEINGTHRGFLNGTQSQVGQFLSFFEDPPRAGAELGLTSAFAIGDSLAHGTYTYNGSLGHEESIARQGTGGTLAQASGFQIFRPGGVSAGEAISRAWSLMGFPTGVSSAPIDPNNQDYWDPNWTAPIGSAYRGHDHFYVCNSNIRGYVGKKKEIPSNTNLLYQSPAFPNWVYVCRGSTSNMAAQSPRAVYVQDWYNVTPTKVIWYVLNLRYSNGNMGVSGTPFTGSDILISPSNFTIKGVSLPNTGYKFINQNAFGNLGYRSDMEYIGNNAAYTGVFGDTTARCEFIGSSNGSLWSPVGYGGAASQISLYKFNAGKQWYVDTNTNSIGNEHGPVWSPSTVPLRLFPNNVASTYVGDDITPSYPGAGNYYQPLSTVWLGLPNAHSTIILTTEVIMGNINTAGQRISTYGGSAWQVQGRRQQSYTAGDAIFHQILTLPPGYLVPYHSTTAYSNTQTWASRPDEFAFRRNGYIYTVKNLGNGNVEFGVIIHAAEAAAIFLPRLRITVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 64306,73170 Da
isoelectric point:6,63416
aromaticity:0,12648
hydropathy:-0,23659

Domains

View on InterPro
Domain architecture
QIO01163.1
1 593 aa
RBD 1–593
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QIO01163.1
1 593 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,7047
Central domain 11 209 200 0,8186
C-terminal 210 593 383 0,8492
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage gmork [NCBI] · taxon 2713300
Uroviricota Caudoviricetes Demerecviridae Epseptimavirus Epseptimavirus S147
Host
Salmonella enteritidis [NCBI] · taxon 149539
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella enterica

Coding sequence (CDS)

Genbank protein accession
QIO01163.1 [NCBI]
Genbank nucleotide accession
MT074463 [NCBI]
CDS location
range 10565 -> 12346
strand +
CDS
ATGAGTTTTTTCGCAGGAAAATTTAGTGATGGTAAAACTGTATTATCTCTAAACGCTGCTAATGGTGGTGATATAAATCAGCACTACTCTCCAAATACTAATAGTATCTTCCACTCAGATATGCCATTTGTCCTAGTTGATGGGACTTACGAGGCTGCTCTAGGTGATGCAGGTAATGGGTATTTTGTTACTCAGATGCCTTGGGATATTATAAACATTAAATCCAATGATCCTGGTAGAGTTATATTAACTGCTATTGAGATAAACGGTACTCATCGTGGATTTCTGAATGGTACTCAATCTCAGGTTGGCCAGTTCTTATCATTCTTTGAAGACCCACCACGTGCTGGTGCTGAGTTAGGATTGACATCTGCTTTTGCTATTGGTGATAGTCTAGCACATGGTACATATACCTATAATGGCTCCTTAGGTCATGAGGAATCTATCGCGCGCCAAGGTACTGGTGGTACTTTGGCCCAAGCATCTGGATTCCAAATATTTAGACCTGGTGGTGTTTCAGCAGGTGAAGCGATCTCTAGGGCTTGGAGTCTCATGGGTTTTCCAACAGGAGTTTCTTCGGCCCCTATAGATCCCAATAACCAAGATTATTGGGATCCTAACTGGACAGCACCTATTGGCTCTGCATACAGAGGTCATGATCATTTTTACGTTTGTAACTCTAATATTAGAGGATATGTAGGTAAGAAAAAAGAAATACCTTCTAATACAAATTTGTTATACCAATCTCCTGCTTTCCCTAATTGGGTATATGTATGTAGGGGTTCTACGTCTAATATGGCCGCTCAGTCACCTAGAGCAGTATACGTCCAAGATTGGTATAATGTTACTCCTACTAAAGTCATTTGGTATGTATTAAACCTACGTTACTCAAATGGTAATATGGGGGTTTCGGGGACTCCATTTACTGGTTCTGATATTCTTATATCCCCTTCTAACTTTACTATTAAAGGGGTTAGTCTACCTAATACAGGGTATAAGTTTATTAACCAGAATGCCTTCGGGAATCTAGGTTATCGCTCCGATATGGAATATATTGGTAATAACGCCGCATACACTGGAGTTTTTGGTGATACAACTGCTCGGTGCGAGTTTATAGGTTCTAGTAATGGAAGTCTATGGTCACCTGTAGGTTATGGAGGTGCTGCGTCCCAGATTAGTCTGTATAAGTTTAACGCAGGTAAACAATGGTACGTAGATACTAATACTAACAGTATTGGTAATGAACATGGCCCTGTATGGAGTCCTAGTACTGTACCTCTTAGATTATTCCCCAATAACGTTGCTAGTACGTATGTAGGAGATGATATTACTCCTTCGTATCCTGGAGCTGGTAACTATTATCAACCATTATCAACTGTTTGGTTGGGTCTACCAAATGCTCATTCTACTATTATATTAACTACTGAAGTTATTATGGGTAATATTAATACTGCTGGACAGCGTATTAGTACTTATGGGGGTAGTGCCTGGCAGGTGCAAGGGAGAAGACAACAGAGTTATACTGCTGGTGATGCTATATTTCACCAAATACTTACATTACCTCCCGGATATTTAGTACCATATCATAGTACTACAGCATATAGTAACACGCAGACTTGGGCAAGTCGTCCAGATGAATTTGCGTTTCGTAGAAATGGGTATATTTATACTGTTAAAAACCTTGGTAATGGTAACGTTGAGTTTGGTGTTATTATACATGCAGCTGAAGCAGCAGCTATATTCTTACCAAGACTACGTATAACCGTGCAACGCCTGACCTAA

Genome Context

Tertiary structure

QIO01163.1
ESMFold structure
Source ESMFold
pLDDT 24.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 36147828 GenBank