Protein

View in Explore
Genbank accession
QIO01163.1 [GenBank]
Protein name
receptor-binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,94
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MSFFAGKFSDGKTVLSLNAANGGDINQHYSPNTNSIFHSDMPFVLVDGTYEAALGDAGNGYFVTQMPWDIINIKSNDPGRVILTAIEINGTHRGFLNGTQSQVGQFLSFFEDPPRAGAELGLTSAFAIGDSLAHGTYTYNGSLGHEESIARQGTGGTLAQASGFQIFRPGGVSAGEAISRAWSLMGFPTGVSSAPIDPNNQDYWDPNWTAPIGSAYRGHDHFYVCNSNIRGYVGKKKEIPSNTNLLYQSPAFPNWVYVCRGSTSNMAAQSPRAVYVQDWYNVTPTKVIWYVLNLRYSNGNMGVSGTPFTGSDILISPSNFTIKGVSLPNTGYKFINQNAFGNLGYRSDMEYIGNNAAYTGVFGDTTARCEFIGSSNGSLWSPVGYGGAASQISLYKFNAGKQWYVDTNTNSIGNEHGPVWSPSTVPLRLFPNNVASTYVGDDITPSYPGAGNYYQPLSTVWLGLPNAHSTIILTTEVIMGNINTAGQRISTYGGSAWQVQGRRQQSYTAGDAIFHQILTLPPGYLVPYHSTTAYSNTQTWASRPDEFAFRRNGYIYTVKNLGNGNVEFGVIIHAAEAAAIFLPRLRITVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 64306,73170 Da
isoelectric point:6,63416
aromaticity:0,12648
hydropathy:-0,23659

Domains

View on InterPro
Domain architecture
QIO01163.1
1 593 aa
RBD 1–593
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QIO01163.1
1 593 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,7047
Central domain 11 209 200 0,8186
C-terminal 210 593 383 0,8492
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage gmork [NCBI] · taxon 2713300
Uroviricota Caudoviricetes Demerecviridae Epseptimavirus Epseptimavirus S147
Host
Salmonella enteritidis [NCBI] · taxon 149539
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
QIO01163.1 [NCBI]
Genbank nucleotide accession
MT074463 [NCBI]
CDS location
range 10565 -> 12346
strand +
CDS
ATGAGTTTTTTCGCAGGAAAATTTAGTGATGGTAAAACTGTATTATCTCTAAACGCTGCTAATGGTGGTGATATAAATCAGCACTACTCTCCAAATACTAATAGTATCTTCCACTCAGATATGCCATTTGTCCTAGTTGATGGGACTTACGAGGCTGCTCTAGGTGATGCAGGTAATGGGTATTTTGTTACTCAGATGCCTTGGGATATTATAAACATTAAATCCAATGATCCTGGTAGAGTTATATTAACTGCTATTGAGATAAACGGTACTCATCGTGGATTTCTGAATGGTACTCAATCTCAGGTTGGCCAGTTCTTATCATTCTTTGAAGACCCACCACGTGCTGGTGCTGAGTTAGGATTGACATCTGCTTTTGCTATTGGTGATAGTCTAGCACATGGTACATATACCTATAATGGCTCCTTAGGTCATGAGGAATCTATCGCGCGCCAAGGTACTGGTGGTACTTTGGCCCAAGCATCTGGATTCCAAATATTTAGACCTGGTGGTGTTTCAGCAGGTGAAGCGATCTCTAGGGCTTGGAGTCTCATGGGTTTTCCAACAGGAGTTTCTTCGGCCCCTATAGATCCCAATAACCAAGATTATTGGGATCCTAACTGGACAGCACCTATTGGCTCTGCATACAGAGGTCATGATCATTTTTACGTTTGTAACTCTAATATTAGAGGATATGTAGGTAAGAAAAAAGAAATACCTTCTAATACAAATTTGTTATACCAATCTCCTGCTTTCCCTAATTGGGTATATGTATGTAGGGGTTCTACGTCTAATATGGCCGCTCAGTCACCTAGAGCAGTATACGTCCAAGATTGGTATAATGTTACTCCTACTAAAGTCATTTGGTATGTATTAAACCTACGTTACTCAAATGGTAATATGGGGGTTTCGGGGACTCCATTTACTGGTTCTGATATTCTTATATCCCCTTCTAACTTTACTATTAAAGGGGTTAGTCTACCTAATACAGGGTATAAGTTTATTAACCAGAATGCCTTCGGGAATCTAGGTTATCGCTCCGATATGGAATATATTGGTAATAACGCCGCATACACTGGAGTTTTTGGTGATACAACTGCTCGGTGCGAGTTTATAGGTTCTAGTAATGGAAGTCTATGGTCACCTGTAGGTTATGGAGGTGCTGCGTCCCAGATTAGTCTGTATAAGTTTAACGCAGGTAAACAATGGTACGTAGATACTAATACTAACAGTATTGGTAATGAACATGGCCCTGTATGGAGTCCTAGTACTGTACCTCTTAGATTATTCCCCAATAACGTTGCTAGTACGTATGTAGGAGATGATATTACTCCTTCGTATCCTGGAGCTGGTAACTATTATCAACCATTATCAACTGTTTGGTTGGGTCTACCAAATGCTCATTCTACTATTATATTAACTACTGAAGTTATTATGGGTAATATTAATACTGCTGGACAGCGTATTAGTACTTATGGGGGTAGTGCCTGGCAGGTGCAAGGGAGAAGACAACAGAGTTATACTGCTGGTGATGCTATATTTCACCAAATACTTACATTACCTCCCGGATATTTAGTACCATATCATAGTACTACAGCATATAGTAACACGCAGACTTGGGCAAGTCGTCCAGATGAATTTGCGTTTCGTAGAAATGGGTATATTTATACTGTTAAAAACCTTGGTAATGGTAACGTTGAGTTTGGTGTTATTATACATGCAGCTGAAGCAGCAGCTATATTCTTACCAAGACTACGTATAACCGTGCAACGCCTGACCTAA

Genome Context

Tertiary structure

QIO01163.1
ESMFold structure
Source ESMFold
pLDDT 24.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank