Protein

View in Explore
Genbank accession
QDH46869.1 [GenBank]
Protein name
putative Phage tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTSRNFGKVPGNAYKPGFIDTESPEMMKMSVDRELGEISKAFYKTDETVATKENSIYKGKWNPSSGAYPDANYENSWWDVETPNDNDYSFDGKVWRSFQKLIYDKSTLSYRLVEDWASATVKERIEKLEVSSGDTTAAIQELERVMIAEDAALAERITNLSTHVDTQNAVLDAKIEDYNTVQSNATSALANKVTTVETEYKAADATLTSSIQNEATARSTADSALATQISTVDANYKAADVVINASITSEATARANGDSALASQITTVKSELEGDIAAVQTYATTNINRIDNEVNAVEAKWGVRVNVNNKITGIQLNNNGNQTSFAVQADQFIISDGTNNNGAPFEVVGGITKIKNAAVGTIASDNWNGSNVGWAITKDGYANFQNVIVRGNLSADTFTGVGGSGNTFPCVSRSKVTTGQVITLETFSISQALQQNSFILVNRPMVVLFGFGRVFLRLRRKDTNAIVASGYGMNYLSNINDGVSVTISLSGTLPAGYSGQLELEGYMDNSHGLGSGAWQADGGSNGDWTVYRAV
Physico‐chemical
properties
protein length:535 AA
molecular weight: 57613,88170 Da
isoelectric point:4,74790
aromaticity:0,08224
hydropathy:-0,32411

Domains

Domains [InterPro]
IPR053171
245–398
IPR053171
IPR015406
291–396
IPR015406
QDH46869.1
1 535
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage LAh_9
[NCBI] 		2591033 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH46869.1 [NCBI]
Genbank nucleotide accession
MK838115 [NCBI]
CDS location
range 91416 -> 93023
strand -
CDS
ATGAGTACAAGTAGAAATTTTGGAAAGGTTCCTGGGAATGCTTACAAACCTGGTTTTATAGATACCGAATCCCCAGAAATGATGAAGATGAGTGTTGACAGGGAACTTGGTGAAATATCAAAAGCTTTCTATAAAACAGATGAAACTGTAGCTACTAAAGAGAATTCGATCTATAAAGGTAAGTGGAACCCCTCCAGCGGAGCCTATCCAGATGCCAATTATGAGAACTCTTGGTGGGATGTTGAAACACCTAACGACAACGATTACAGTTTTGATGGTAAAGTCTGGAGAAGCTTCCAGAAACTTATCTACGATAAGTCAACATTATCTTATAGATTAGTTGAAGACTGGGCTTCAGCTACTGTAAAAGAGCGTATAGAAAAACTTGAGGTAAGTTCTGGTGACACAACAGCTGCAATACAAGAACTTGAGAGGGTTATGATTGCAGAGGATGCTGCTTTAGCAGAGAGGATTACCAACCTAAGCACGCATGTTGATACACAAAATGCTGTTCTTGATGCAAAAATAGAGGACTACAATACTGTACAGTCAAATGCTACAAGTGCTTTGGCAAACAAGGTTACAACTGTTGAGACGGAATATAAGGCAGCAGATGCCACACTTACATCTTCTATTCAGAATGAGGCAACTGCAAGATCTACTGCTGATTCTGCTTTAGCTACACAGATCTCAACTGTTGATGCTAATTATAAAGCTGCTGATGTTGTGATAAACGCATCAATAACTTCTGAAGCTACGGCTAGAGCCAACGGAGACTCTGCCCTGGCATCACAAATAACAACTGTTAAGAGTGAGTTAGAAGGTGATATAGCTGCTGTTCAAACTTATGCTACAACTAATATCAACCGAATAGATAATGAAGTTAATGCAGTGGAAGCTAAGTGGGGTGTGAGGGTAAACGTTAATAATAAAATTACTGGTATTCAATTAAACAATAATGGAAATCAAACATCCTTTGCTGTTCAGGCAGATCAGTTTATAATCAGCGATGGTACAAACAATAATGGTGCACCTTTTGAAGTTGTTGGTGGTATTACTAAGATAAAAAATGCAGCTGTAGGTACTATTGCCTCTGATAACTGGAACGGTTCTAATGTTGGTTGGGCTATCACAAAAGATGGTTATGCCAATTTCCAGAATGTTATTGTAAGGGGCAACTTGAGTGCAGACACTTTTACTGGTGTTGGTGGTAGTGGTAATACATTCCCATGTGTTTCTAGATCTAAAGTTACCACAGGGCAGGTTATAACACTGGAGACTTTTTCAATAAGCCAAGCCTTACAGCAAAATTCTTTCATCTTGGTCAATAGGCCGATGGTTGTTTTGTTTGGCTTTGGTAGAGTGTTTCTTAGACTCAGAAGAAAAGATACTAATGCCATTGTAGCATCAGGTTATGGTATGAACTATCTATCGAACATAAATGATGGAGTATCTGTTACCATTTCATTATCTGGAACGTTGCCCGCTGGGTACTCTGGACAATTGGAGTTAGAAGGTTATATGGACAACAGTCATGGCCTAGGCAGTGGTGCTTGGCAGGCTGATGGTGGTTCTAATGGGGATTGGACTGTTTATAGAGCAGTTTAA

Tertiary structure

PDB ID
8618d02c8c7563f655e1cdc3200f81b03a76a34e0f517a4c6d6e78df4c9fd85d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6725
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages capable of disrupting biofilms from clinical strains of Aeromonas hydrophila with intrinsic antibiotic resistance Kabwe,M., Brown,T.L., Speirs,L., Ku,H., Leach,M., Chan,H.T., Petrovski,S., Lock,P. and Tucci,J. 2020-02-14 — GenBank