Protein

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Genbank accession
YP_919014.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAEQYYVVFTGQGVRVFDLNGKEYDVKGDLSYVKVENPRDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLKENGDCLINIRGGMYGRTLAFTINNTKIAYEIAHGDAPEHSKQTDAQWLVKKLAGLARLNVAFKGWTFTEGPGYIHVIAPSNSQINSLSTEDGYADQLMNAVMHTSQSFSRLPVEAPNGYTVKIVGDTSKTSDMFYVQYDNMKKVWKEVAGWGVQKGLNGGTMPHALVRQADGSFQMQVLPWTQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPNYIPNGVFSIRGSSTENFISVLSSNAPSRIFLYKFLYLNEEIAQQSWSHWELGSNVTVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPEGSYNDDTYATTVKPVDVYGMKYWTGKFYIVASDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKKTADDGSIATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNVLRAGGLNVGTGQFRFPVTGNAQLNEVRIISEHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:792 AA
molecular weight: 88386,74510 Da
isoelectric point:6,35610
aromaticity:0,11237
hydropathy:-0,26692

Domains

View on InterPro
Domain architecture
YP_919014.1
1 792 aa
TTP 1–792
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_919014.1
1 792 aa
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9929
Central domain 142 344 204 0,1208
C-terminal 345 792 447 0,2262
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Yersinia phage Berlin [NCBI] · taxon 369257
Uroviricota Caudoviricetes Autographivirales Studiervirinae Berlinvirus
Host
Yersinia pestis [NCBI] · taxon 632
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_919014.1 [NCBI]
Genbank nucleotide accession
NC_008694 [NCBI]
CDS location
range 22093 -> 24471
strand +
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAGGGCGGTATCAGTCAACAGCCGAACATCTTAAGGTTCCCCGAACAGGGTTCCGAGCAGATTAATGGTTGGTCCTCGGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTGCCAAACCTCTAGTTCACCTCATCAACCGTGATAGTGCCGAACAGTATTACGTAGTGTTTACCGGACAGGGTGTTCGTGTGTTCGATCTAAACGGTAAAGAGTATGATGTAAAGGGTGATTTGTCCTACGTTAAGGTAGAGAACCCTCGAGATGACTTAAGGATGGTCACTGTGGCTGACTACACATTTATCGTTAATCGCAATATGGTTGTGCGCCCAGATACTACCCCTTTGTATACCCTTAAGGAGAATGGAGACTGCTTGATTAACATCCGCGGGGGTATGTATGGTCGTACGTTGGCATTCACTATTAACAACACAAAGATTGCATACGAGATTGCCCATGGGGACGCACCAGAACATTCTAAGCAGACTGACGCACAGTGGCTCGTTAAGAAACTTGCTGGTCTCGCGCGTTTGAATGTTGCCTTTAAGGGCTGGACGTTCACCGAAGGGCCTGGGTACATCCATGTGATTGCTCCAAGTAACAGTCAGATTAACTCACTGTCCACTGAAGATGGCTACGCCGACCAGTTGATGAACGCAGTGATGCACACCAGCCAGTCATTCAGTAGGTTGCCCGTTGAGGCTCCTAATGGATACACAGTGAAGATTGTTGGGGACACCTCTAAGACATCCGATATGTTCTACGTTCAGTACGACAATATGAAGAAGGTATGGAAAGAGGTTGCTGGTTGGGGAGTACAGAAGGGACTTAATGGAGGCACGATGCCTCATGCTCTGGTACGTCAGGCTGATGGGTCATTCCAGATGCAAGTCCTACCGTGGACACAACGTACCTGTGGTGACATGGACACTAACCCTACGCCGTCTATTGTTGACCAGAAGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTCGCTGGTGAGAACATTGTGATGTCCCGTACCTCTAAGTATTTTTCATTGTTCCCTGCATCAGTAGCTAACCTGTCCGACGATGACCCTATCGACGTGGCTGTGTCTCATAACCGAATCTCTATCCTGAAGTACGCCGTACCGTTCTCTGAGGAGTTGCTCCTATGGTCAGACCAAGCACAGTTCGTGTTGTCTGCTCAAGGTATCCTCTCACCTAAGTCAGTAGAGTTGAACCTCACGACCGAGTTCGATGTGTCAGACCGAGCGAGACCTTTTGGCGTTGGGCGCGGTGTGTACTTTGCGTCACCTCGTGCTTCCTATACGTCACTTAACCGTTATTATGCGGTACAGGATGTTAGCTCTGTGAAGTCTGCTGAGGATATGAGTGCTCACGTTCCTAACTACATTCCGAACGGTGTGTTCTCTATACGAGGCTCCAGCACTGAGAACTTCATCTCTGTGTTGTCTTCAAATGCTCCAAGCAGAATCTTCCTCTATAAGTTCCTCTACTTGAACGAAGAGATAGCACAACAGTCGTGGTCACATTGGGAACTAGGAAGTAACGTTACCGTACTGGCCTGTGACTCTATTGGTTCCACCATGTACCTTGTGTTGCGCAATCAGTCACACACTTGGATGTGTCGTGCTCACTTTACGAAGAACAGCATCGACTTCCCTGATGAGCCGTATCGTCTGTACATTGACAATAAGGTGAAGTATGTGATTCCTGAAGGTTCATACAATGATGACACTTACGCTACCACTGTGAAACCTGTAGACGTCTATGGGATGAAATACTGGACCGGTAAGTTCTACATTGTGGCCTCTGATGGACTGGTGTCATGGTTCGAGCCTCCTCGTGGTGGTTGGCCTAATGGTGTACCTATGTTAACAATGAGTGGGAACCGTGAGGGTGAGACAATCTACGTTGGGTTGGCTATCAGCTTCCGCTATGTGTTCTCTAAGTTCCTCATTAAGAAGACCGCTGATGATGGCTCTATAGCTACCGAGGACATTGGTCGTTTACAGTTACGCCGAGCATGGGTGAACTACGAGGACTCTGGTGCATTCACAGTGGAAGTGGAGAACACCTCTCGACTGTTCAGCTATGATATGGCAGGTGCTCGCTTGGGTTCCAATGTGTTACGTGCTGGTGGACTTAATGTTGGTACGGGTCAGTTCCGCTTCCCGGTGACTGGTAATGCACAGTTGAATGAAGTACGTATTATCTCTGAACACACCACACCACTGAACGTTATCGGTTGTGGTTGGGAGGGTAACTACCTTCGTCGTTCTTCTGGTATCTAA

Genome Context

Tertiary structure

YP_919014.1
ESMFold structure
Source ESMFold
pLDDT 90.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Sequence of bacteriophage Berlin Rakin,A. 1995-06-15 — GenBank