Phage RBP Database

Genbank accession

XLL21175.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,55

Protein sequence

MSYVVQYTDAGLAELISARNQGLKGAIKYIAVGDRSYTPTTGQKALKHELQREVILDWEELSPTQLRMGAVFKGSQEYEVREVGFFLESGTLLAVYSAPNTLLTYKSANSSWLQKFTLDVSPLPSSSVTIEVGTENVNLLMSEEVLTAAIATISLGTTQIKIAHQHLLLSERLRTELG

Physico‐chemical properties

protein length:	178 AA
molecular weight:	19565,08240 Da
isoelectric point:	5,41030
aromaticity:	0,07303
hydropathy:	-0,02303

Domain architecture

XLL21175.1

1 178 aa

ATT 3–101 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR022225
ATT

IPR022225

XLL21175.1

1178 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1466
ATT

DC_1466

XLL21175.1

1178 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR022225	ATT	DC_0271	3	101	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits

Proteins with similar domain architecture

Phage

Vibrio phage 10N.286.55.C4_PE001 [NCBI] · taxon 3385351

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Vibrio cyclitrophicus [NCBI] · taxon 47951

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

XLL21175.1 [NCBI]

Genbank nucleotide accession

PQ189371.1 [NCBI]

CDS location

range 13180 -> 13716
strand -

CDS

ATGAGTTATGTCGTGCAATACACCGATGCAGGGCTCGCTGAGCTTATTAGCGCTCGTAACCAAGGGCTAAAAGGGGCGATTAAATACATTGCCGTGGGTGACCGCAGTTATACACCGACGACAGGTCAGAAGGCGTTGAAACACGAGCTTCAACGCGAAGTCATTTTAGATTGGGAGGAGCTCAGCCCAACACAATTGAGAATGGGTGCCGTATTCAAAGGTAGCCAAGAATATGAAGTTCGTGAAGTGGGGTTCTTTTTAGAATCCGGTACTTTGCTAGCGGTGTATTCCGCCCCGAATACATTGCTTACCTACAAATCGGCGAACTCGAGCTGGCTACAGAAGTTCACACTGGATGTGTCACCACTGCCGAGCAGCAGCGTGACAATCGAGGTCGGTACCGAGAATGTGAATTTACTGATGTCTGAAGAGGTGTTGACCGCTGCTATCGCAACGATTTCTTTGGGAACAACACAAATTAAAATAGCTCACCAGCATTTGTTGCTTAGTGAGCGCCTAAGAACGGAGCTGGGTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)