Protein

View in Explore
Genbank accession
AUR98933.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAGGFQNTRKAGDFPSAGRAASQGGAGTGEVDTVNGVSPDAAGNVQLTASDVGAHSRGDADNRFETKRATGTIGAADDPEKKPEGDYYVTESFIGAPTVASGNYVGPMRINLDFDGSDNGGLIEYITDAAVFYKPKFAGGWASDWIEAPKAQAAMARTLSTLGAEETALEKKVADLEKEVAALGGGGSAPTPTFDPSMFQSAVDHGYAADDQGAKSSKTTDGWWIFKDLSSVSGRPTGSIGDLVVFKNTIDTANAAFKHAFVMAIGQDQDLEDAIWFMYRDGTAWSSWFRETGNDKKQIDSIVKDVGSLKQGNAVAVSRLDAVQTAIGKIYAPSKIAFNDAVTGLINAALANYTPSKPSHGGDKPSLVFPRFYAQFSLGVPVNFTGAVTSTNAEATLMRIPVTRSRIFISVENENDEASKVKGFKFNNKQEMSLNHRDIVIDGKKYRAFYTSGAFTDKSVEIKVDFGQGI
Physico‐chemical
properties
protein length:470 AA
molecular weight: 49914,83540 Da
isoelectric point:5,18652
aromaticity:0,09574
hydropathy:-0,32681

Domains

Domains [InterPro]
DC_0845
STR
30–205
DC_0845
Coil
Unmapped
159–179
Coil DC_0845
AUR98933.1
1 470
Architecture
STR
STR 30-470
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.257.O._10N.286.46.A4
[NCBI] 		1881445 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98933.1 [NCBI]
Genbank nucleotide accession
MG592623.1 [NCBI]
CDS location
range 18217 -> 19629
strand +
CDS
ATGGCTGGTGGATTTCAAAACACTAGAAAGGCGGGAGACTTTCCGAGCGCTGGTAGGGCTGCAAGTCAAGGCGGAGCTGGTACGGGTGAAGTTGATACGGTTAATGGAGTTAGTCCAGACGCAGCGGGAAACGTTCAACTAACTGCAAGTGATGTTGGCGCGCATAGTCGCGGTGATGCTGATAATAGGTTCGAAACAAAAAGAGCAACCGGAACAATAGGCGCAGCGGACGACCCAGAGAAAAAGCCAGAGGGTGACTATTACGTAACCGAAAGCTTTATAGGTGCGCCAACCGTTGCAAGTGGAAACTATGTTGGGCCAATGCGAATTAATCTTGATTTTGACGGCTCCGACAATGGCGGCCTGATTGAGTACATAACAGACGCGGCTGTTTTCTATAAGCCAAAGTTTGCTGGTGGGTGGGCTAGTGACTGGATAGAAGCGCCAAAGGCACAAGCGGCAATGGCAAGAACATTATCAACACTGGGCGCAGAAGAAACGGCACTAGAAAAGAAAGTGGCAGATCTAGAAAAGGAAGTGGCTGCGCTGGGTGGTGGTGGGAGCGCGCCAACTCCAACATTTGATCCATCAATGTTTCAATCCGCCGTTGACCATGGCTATGCAGCGGATGACCAAGGTGCTAAATCAAGTAAGACCACAGATGGGTGGTGGATATTTAAGGATTTATCATCCGTATCTGGTCGCCCTACTGGGTCTATTGGTGATTTGGTTGTATTTAAAAACACCATTGACACCGCCAACGCCGCATTTAAGCACGCGTTTGTGATGGCTATCGGCCAAGACCAAGATCTAGAAGATGCTATTTGGTTTATGTATCGAGACGGAACCGCATGGTCTTCATGGTTTAGGGAGACAGGTAACGACAAGAAGCAAATTGATTCTATTGTGAAAGATGTCGGAAGTCTCAAGCAAGGAAATGCAGTCGCGGTAAGCAGACTTGATGCGGTGCAAACTGCGATTGGTAAGATTTACGCACCAAGCAAGATTGCTTTTAATGATGCCGTGACAGGGTTAATAAATGCAGCTCTAGCCAATTACACGCCATCCAAGCCGAGCCATGGCGGCGATAAACCAAGCTTGGTGTTCCCTAGGTTTTACGCGCAATTCTCTTTGGGTGTGCCTGTTAATTTTACCGGAGCGGTAACATCAACAAATGCAGAAGCAACACTAATGAGAATCCCAGTTACAAGAAGTAGAATATTTATTTCAGTAGAAAATGAGAACGACGAAGCAAGCAAAGTAAAAGGCTTTAAGTTCAACAACAAACAAGAAATGTCACTTAATCATAGAGACATTGTTATTGACGGTAAGAAGTACAGAGCGTTCTATACATCTGGAGCATTTACCGATAAGTCAGTAGAAATTAAAGTTGACTTTGGACAGGGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
42a0b7135b9591d18be5927c4e2c3294ef76bd230bb6e65e93eff931de4a0c31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6404
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank