Protein

View in Explore
Genbank accession
QLB38216.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYTPITEWRGDLFRRQLRRALNEISNLNTSLFDEVKTAEKTPIITLNAGFGVSAIRDVQAVTGSGAISSVGGEILLSTGATATSSAVLESAKIGTYIPGNSAQIGLGVRFPALPTGSQFANWGGLNNGGTDGFYFGVDATGFYAARRDGGTETKVRAEDFNIDKLDGSGASGVTLDLSKGYIFHIDYAYYGHGPIIFSISRLSSGSNNWIQCHAVEVDGQVSIRDPNLAIHAETNNGGDATDFAAYIGGRQFSIIGKYVPNRRVTGQERDSVSTSATALPLITFRRKSAFGSRSAILDGFTVDVGSAPVIVEVRINGALTGASYVTPSNVTAAETALEVDTSATGVTGGEVVWSAYFAAGTGRNTVANSATLGLDIPRDQPVTLCARTLSGTGSIVSHMLMAEEW
Physico‐chemical
properties
protein length:406 AA
molecular weight: 42590,94450 Da
isoelectric point:5,34329
aromaticity:0,08374
hydropathy:-0,01379

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLB38216.1
1 406
Domain Start End Length (AA) Confidence
N-terminal 1 212 212 0,3526
Central domain 213 395 184 0,0051
C-terminal 396 406 10 0,9967
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-212
Central
213-395
C-terminal
396-406

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfitobacter phage phiGT1
[NCBI] 		2745703 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sulfitobacter sp. HGT1
[NCBI] 		2735435 Pseudomonadota > Alphaproteobacteria > Rhodobacterales > Roseobacteraceae > Sulfitobacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLB38216.1 [NCBI]
Genbank nucleotide accession
MT584811 [NCBI]
CDS location
range 3697 -> 4917
strand +
CDS
ATGGCCTATACCCCAATCACGGAATGGCGCGGCGATTTGTTCCGGCGGCAACTAAGGCGGGCATTGAATGAGATTTCCAACTTGAACACATCGCTATTTGACGAAGTAAAGACAGCCGAAAAGACCCCGATCATCACTTTGAACGCGGGATTTGGCGTGTCTGCAATCCGAGACGTTCAGGCGGTTACGGGTTCGGGGGCCATTTCGTCGGTCGGCGGGGAAATACTGCTATCCACAGGCGCAACGGCAACCAGTTCTGCGGTTCTGGAAAGCGCCAAGATTGGCACCTACATTCCGGGCAATTCGGCGCAGATCGGCTTGGGGGTTCGCTTCCCGGCCCTTCCAACTGGGAGCCAGTTCGCAAATTGGGGCGGTCTTAACAACGGCGGCACCGATGGCTTTTACTTCGGCGTTGATGCGACTGGGTTTTATGCCGCTCGGCGGGATGGCGGCACCGAAACGAAGGTGCGGGCTGAAGACTTCAACATTGACAAGCTAGACGGCAGCGGGGCCAGCGGCGTTACGCTTGACCTGTCAAAAGGCTACATATTTCATATCGACTACGCTTATTACGGGCATGGTCCGATCATCTTTTCAATTTCGCGCCTGTCCAGCGGCAGCAACAACTGGATTCAATGCCACGCCGTTGAGGTGGATGGCCAGGTTTCCATCAGAGACCCCAACCTTGCGATACATGCCGAGACAAACAACGGCGGCGATGCAACTGATTTCGCGGCCTACATCGGCGGGCGGCAATTCTCCATCATCGGGAAGTATGTGCCAAACCGCCGCGTCACGGGGCAGGAGCGGGACAGCGTTTCGACCAGCGCGACCGCCTTGCCGTTGATTACATTCAGGCGCAAGTCGGCATTTGGGAGCCGCAGCGCAATTCTTGATGGCTTCACAGTCGATGTGGGGTCCGCGCCCGTAATTGTTGAAGTTCGCATTAATGGCGCACTAACTGGCGCAAGCTATGTCACGCCGTCCAACGTCACAGCGGCAGAGACCGCGCTTGAAGTTGACACCAGCGCCACGGGCGTAACTGGCGGCGAGGTCGTTTGGTCGGCCTATTTCGCGGCAGGCACGGGCCGCAACACAGTCGCCAACAGCGCAACCTTGGGGCTGGATATTCCACGCGATCAGCCTGTTACGCTCTGCGCCCGCACACTGAGCGGCACCGGGAGCATCGTGTCTCATATGCTCATGGCAGAGGAATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
18b3caf7410b68a4ba7177b90b12f8a862e8bc0953e38fe2839b15d4f91a0844
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8211
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Sulfitobacter phage phiGT1, isolated from a tidal flat Hwang,C.Y., Cho,Y., Jang,G.I., Cho,B.C. and Hardies,S.C. 2020-08-13 — GenBank