Phage RBP Database

Genbank accession

AOO13147.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,79

TSP

Evidence RBPdetect2

Probability 0,68

Seq2Symm

C3 confidence 0,993

C3	0,993
C1	0,321
C6	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSRLNVDRISGLTAGSGAPELEIDSSGRFNFDSGTLYIDSVNNRVGVGTSSPTVSMDMGGATDGMVLPKGTDAQRPGSPAAGMLRYNTTSGKVEVYDASNSWADVGGGIPEMNDDTAGSVLRCRRADGNAYDSDNVRNNDEYEAYWTHDLDANYRLENLTQWPFRYIINRGYTIGGYKNAAPYRNGNRTTHSADVTLSLGDVIDRSAAYIGGSMNGINIFVYNCANSWLPAVANTCSYSMITETNRGQNSNWNTLRNRSYSGAWIDFLGNQWYTNNGRNRAYITSGNGNTDRHDLNTEVMLSDIGGTINRVAHAEGEYYSWVSTGQYRFEFASESYTAWSNYAPAPGSGGLNKHQRTRIGFFYASEGTNRNRALTKRRDSDAVILRSGITKPESGGEENNHTGMNKGYCISNYNGAQNNNAWIYYYYVDVVLFGDSTITYRKGIPGSSSGVGREAGDMIGAGIVPRTYMTYTGSGYQAIGGEPLADGTGAMGGFGSY

Physico‐chemical properties

protein length:	497 AA
molecular weight:	54024,33850 Da
isoelectric point:	5,50829
aromaticity:	0,11066
hydropathy:	-0,59437

Domain architecture

AOO13147.1

1 497 aa

RBD 46–106 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR059888
RBD

IPR059888

AOO13147.1

1497 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0841
STR

DC_0841

AOO13147.1

1497 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR059888	RBD	DC_0792	46	106	InterPro cluster	Phage tail-like, trimerisation region	C-terminal	Low	Positional only	22 proteins / 22 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AOO13147.1

1 497 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	125	125	0,0551
Central domain	126	324	200	0,3640
C-terminal	325	497	172	0,7233

Note: Constraints were applied during segmentation.
Fixed 146 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Cyanophage S-RIM14 [NCBI] · taxon 1278423

Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Ahtivirus Ahtivirus sagseatwo

Host

Synechococcus [NCBI] · taxon 1129

Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus

Genbank protein accession

AOO13147.1 [NCBI]

Genbank nucleotide accession

KX349298 [NCBI]

CDS location

range 32430 -> 33923
strand +

CDS

ATGTCTAGACTAAATGTTGATAGAATCTCAGGTCTAACTGCTGGTTCGGGTGCTCCTGAACTAGAGATTGACAGTAGTGGTCGTTTCAATTTCGATAGCGGTACTCTGTATATTGATTCTGTGAATAACAGGGTCGGTGTTGGAACATCTTCACCAACGGTGTCTATGGACATGGGTGGTGCTACTGATGGTATGGTTCTACCTAAGGGCACAGACGCTCAGAGACCTGGATCACCTGCAGCGGGTATGCTGAGGTATAACACTACGTCAGGCAAGGTTGAGGTCTACGACGCATCCAACTCCTGGGCAGATGTGGGTGGCGGTATTCCTGAGATGAATGATGACACAGCAGGTTCTGTTCTGCGTTGTCGTCGTGCTGATGGTAATGCATACGATTCTGATAACGTCAGAAACAATGATGAGTACGAAGCATACTGGACTCACGATCTAGACGCAAACTATAGACTAGAAAACCTCACACAGTGGCCCTTTAGATATATTATCAACCGTGGATATACCATCGGTGGATATAAGAACGCTGCTCCATATCGTAATGGTAACCGTACTACTCACTCTGCTGACGTTACACTATCTCTAGGTGATGTTATCGATAGATCTGCTGCATACATTGGCGGATCCATGAATGGTATCAACATCTTTGTATATAACTGCGCTAACTCTTGGTTGCCTGCTGTTGCAAACACATGTTCATACTCGATGATTACGGAGACAAACCGTGGTCAGAATAGTAACTGGAACACTCTCAGAAATAGATCTTATTCTGGTGCATGGATTGACTTCTTAGGCAATCAGTGGTACACAAATAACGGTAGAAATAGAGCATATATTACTTCTGGTAATGGTAACACTGACCGTCACGATCTCAATACTGAGGTTATGCTAAGTGACATTGGTGGTACTATCAACCGTGTTGCACATGCTGAAGGTGAGTATTACTCCTGGGTGTCTACAGGTCAGTATAGATTTGAGTTCGCTAGTGAGTCATACACTGCATGGTCCAACTATGCTCCTGCACCTGGATCTGGTGGTCTGAACAAGCACCAGCGTACTAGAATTGGTTTCTTCTATGCTTCTGAGGGTACAAACAGAAACAGAGCACTCACTAAGCGTCGTGACTCTGATGCGGTCATTCTACGTTCTGGTATTACTAAACCCGAATCTGGTGGTGAGGAGAACAACCACACTGGTATGAACAAGGGTTACTGCATCTCTAACTATAACGGAGCACAGAACAACAACGCTTGGATCTATTATTACTACGTTGATGTCGTCCTCTTCGGTGACTCTACAATCACATATCGTAAGGGTATCCCTGGATCTTCTTCTGGTGTTGGTAGAGAAGCAGGAGACATGATTGGTGCTGGTATTGTTCCACGTACCTATATGACTTACACAGGTTCTGGTTATCAAGCAATCGGCGGTGAACCACTTGCTGATGGCACTGGTGCCATGGGTGGTTTCGGTTCTTACTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)