Phage RBP Database

Genbank accession

AOO13147.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,79

TSP

Evidence RBPdetect2

Probability 0,68

Protein sequence

MSRLNVDRISGLTAGSGAPELEIDSSGRFNFDSGTLYIDSVNNRVGVGTSSPTVSMDMGGATDGMVLPKGTDAQRPGSPAAGMLRYNTTSGKVEVYDASNSWADVGGGIPEMNDDTAGSVLRCRRADGNAYDSDNVRNNDEYEAYWTHDLDANYRLENLTQWPFRYIINRGYTIGGYKNAAPYRNGNRTTHSADVTLSLGDVIDRSAAYIGGSMNGINIFVYNCANSWLPAVANTCSYSMITETNRGQNSNWNTLRNRSYSGAWIDFLGNQWYTNNGRNRAYITSGNGNTDRHDLNTEVMLSDIGGTINRVAHAEGEYYSWVSTGQYRFEFASESYTAWSNYAPAPGSGGLNKHQRTRIGFFYASEGTNRNRALTKRRDSDAVILRSGITKPESGGEENNHTGMNKGYCISNYNGAQNNNAWIYYYYVDVVLFGDSTITYRKGIPGSSSGVGREAGDMIGAGIVPRTYMTYTGSGYQAIGGEPLADGTGAMGGFGSY

Physico‐chemical properties

protein length:	497 AA
molecular weight:	54024,33850 Da
isoelectric point:	5,50829
aromaticity:	0,11066
hydropathy:	-0,59437

Domain architecture

AOO13147.1

1 497 aa

RBD 46–106 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR059888
RBD

IPR059888

AOO13147.1

1497 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0841
STR

DC_0841

AOO13147.1

1497 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR059888	RBD	DC_0792	46	106	InterPro cluster	Phage tail-like, trimerisation region	C-terminal	Low	Positional only	22 proteins / 22 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AOO13147.1

1 497 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	125	125	0,0551
Central domain	126	324	200	0,3640
C-terminal	325	497	172	0,7233

Note: Constraints were applied during segmentation.
Fixed 146 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Cyanophage S-RIM14 [NCBI] · taxon 1278423

Uroviricota Caudoviricetes Pantevenvirales Ahtivirus Ahtivirus sagseatwo

Host

Synechococcus [NCBI] · taxon 1129

cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae

Genbank protein accession

AOO13147.1 [NCBI]

Genbank nucleotide accession

KX349298 [NCBI]

CDS location

range 32430 -> 33923
strand +

CDS

ATGTCTAGACTAAATGTTGATAGAATCTCAGGTCTAACTGCTGGTTCGGGTGCTCCTGAACTAGAGATTGACAGTAGTGGTCGTTTCAATTTCGATAGCGGTACTCTGTATATTGATTCTGTGAATAACAGGGTCGGTGTTGGAACATCTTCACCAACGGTGTCTATGGACATGGGTGGTGCTACTGATGGTATGGTTCTACCTAAGGGCACAGACGCTCAGAGACCTGGATCACCTGCAGCGGGTATGCTGAGGTATAACACTACGTCAGGCAAGGTTGAGGTCTACGACGCATCCAACTCCTGGGCAGATGTGGGTGGCGGTATTCCTGAGATGAATGATGACACAGCAGGTTCTGTTCTGCGTTGTCGTCGTGCTGATGGTAATGCATACGATTCTGATAACGTCAGAAACAATGATGAGTACGAAGCATACTGGACTCACGATCTAGACGCAAACTATAGACTAGAAAACCTCACACAGTGGCCCTTTAGATATATTATCAACCGTGGATATACCATCGGTGGATATAAGAACGCTGCTCCATATCGTAATGGTAACCGTACTACTCACTCTGCTGACGTTACACTATCTCTAGGTGATGTTATCGATAGATCTGCTGCATACATTGGCGGATCCATGAATGGTATCAACATCTTTGTATATAACTGCGCTAACTCTTGGTTGCCTGCTGTTGCAAACACATGTTCATACTCGATGATTACGGAGACAAACCGTGGTCAGAATAGTAACTGGAACACTCTCAGAAATAGATCTTATTCTGGTGCATGGATTGACTTCTTAGGCAATCAGTGGTACACAAATAACGGTAGAAATAGAGCATATATTACTTCTGGTAATGGTAACACTGACCGTCACGATCTCAATACTGAGGTTATGCTAAGTGACATTGGTGGTACTATCAACCGTGTTGCACATGCTGAAGGTGAGTATTACTCCTGGGTGTCTACAGGTCAGTATAGATTTGAGTTCGCTAGTGAGTCATACACTGCATGGTCCAACTATGCTCCTGCACCTGGATCTGGTGGTCTGAACAAGCACCAGCGTACTAGAATTGGTTTCTTCTATGCTTCTGAGGGTACAAACAGAAACAGAGCACTCACTAAGCGTCGTGACTCTGATGCGGTCATTCTACGTTCTGGTATTACTAAACCCGAATCTGGTGGTGAGGAGAACAACCACACTGGTATGAACAAGGGTTACTGCATCTCTAACTATAACGGAGCACAGAACAACAACGCTTGGATCTATTATTACTACGTTGATGTCGTCCTCTTCGGTGACTCTACAATCACATATCGTAAGGGTATCCCTGGATCTTCTTCTGGTGTTGGTAGAGAAGCAGGAGACATGATTGGTGCTGGTATTGTTCCACGTACCTATATGACTTACACAGGTTCTGGTTATCAAGCAATCGGCGGTGAACCACTTGCTGATGGCACTGGTGCCATGGGTGGTTTCGGTTCTTACTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)