Protein

View in Explore
Genbank accession
YP_010658053.1 [GenBank]
Protein name
carboxypeptidase regulatory domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MSATITSADAVLTTLTVQGTGGTPGGLVGIYIDNVLRSERDVPDSSGNWEIVVTNLTGGNHTVRCTDIITTGTSVVTQFVPSSVTVAASDGNTTEDLTPVVGGTILDAEDNPIANATVTVYYKARASSTYTAAGATTSNSSGVYSLEIKTPLPDGEYDFYAVVTGASFTSDVASVEVSKPLEAPVMEPVEDKLFAIAADSIFVGINPPSGYELFTAKTMNIAKPLGEWSIGGSALGITIDSTTGTATITTPAQFAAAGSRQISVTCTNSEGSDTSLVNIVVVADNSTIKYVDSVGGLDTNTGNNPNVPLQTNNSSSNNTRRFKRGGTYNFQLNGADNQTREDYGDPWKPRPKLGSGQSYGYNGANQDYVTLRSLNFDGFTSRGIYIQVVTNTIIEDCLISNSGSSNLQGTKLHNSDKAAALTVPDLPGRLFNLIYRNNEVKNVKGDGLYITKINGILIENNKHDAAYGGGADCIQIAYENSSTNVSRDVMIRGNLLLQQPLSQSDKGGLVCEQTLRYVAEYNDIGGKNFSFSSIGFDAVCRSNNMRDGKLNTYSFGYGTGEQSHFGRHHVYDNFITNCIRGVGLSSFGDSTILNNGVYGYQRYDMEFHDNVISKCTYGFFADRPWSGYFKRNILMQCTNGITRQGGTVSGNTVANMGVYTTQDVTGNYTNDGTWLNSAAPVLTGSIIAGGTVSVAGAVWKLNGVVTVPDEVFYVWRNKGYDIAGAAGDSYTIPVDAASDFELSCVMFARKGTNWMLAVAENDWPTSAYFIPRAYTEGALGWRKRYFKLGDVA
Physico‐chemical
properties
protein length:792 AA
molecular weight: 84669,89330 Da
isoelectric point:4,91489
aromaticity:0,09470
hydropathy:-0,20770

Domains

Domains [InterPro]
IPR006626
7–34
IPR006626 IPR008969 IPR012334 IPR006626 IPR006626
G3DSA:2.60.40.1120
101–185
G3DSA:2.60.40.1120 IPR011050
IPR006626
366–388
IPR006626 IPR006626 IPR006626
YP_010658053.1
1 792
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y38
[NCBI] 		2509781 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010658053.1 [NCBI]
Genbank nucleotide accession
NC_070853 [NCBI]
CDS location
range 16529 -> 18907
strand +
CDS
ATGTCCGCAACAATCACAAGTGCTGATGCAGTACTTACAACGCTCACTGTTCAAGGTACTGGTGGTACCCCAGGTGGACTCGTAGGTATCTATATTGATAACGTCCTCAGATCAGAAAGAGATGTCCCAGATTCCAGCGGTAACTGGGAAATCGTTGTTACCAACCTGACTGGTGGTAATCACACAGTACGATGCACAGACATCATCACCACTGGAACCAGTGTGGTTACACAGTTCGTTCCGTCTTCTGTCACGGTTGCTGCTTCTGACGGTAATACGACAGAGGATCTTACCCCTGTGGTTGGTGGTACGATTCTGGATGCAGAAGACAATCCCATCGCCAATGCGACTGTGACGGTCTATTACAAGGCTCGTGCGTCTTCGACCTATACTGCTGCTGGAGCTACCACTTCAAACTCCTCGGGTGTCTATAGCCTTGAAATCAAAACCCCTCTTCCAGATGGTGAATATGATTTCTATGCTGTAGTAACCGGTGCTTCCTTCACTTCTGATGTTGCATCTGTTGAAGTTAGTAAGCCTCTTGAGGCTCCTGTCATGGAACCAGTAGAGGATAAACTCTTCGCTATTGCAGCGGATAGTATCTTTGTCGGTATTAATCCTCCATCTGGTTATGAGCTTTTCACCGCCAAGACTATGAACATTGCCAAGCCTCTTGGCGAATGGTCCATTGGTGGTTCTGCTCTCGGTATTACGATTGATTCGACTACCGGTACCGCAACCATCACAACACCTGCTCAGTTTGCTGCTGCTGGTTCTCGTCAGATCTCTGTCACCTGCACGAACTCTGAAGGCAGTGATACGTCATTGGTCAACATCGTTGTTGTCGCTGACAACAGCACAATCAAGTACGTAGATTCTGTAGGTGGTTTGGATACCAATACTGGTAACAACCCCAACGTACCCCTGCAAACAAACAACTCTAGTTCCAATAATACCCGTCGCTTCAAGCGTGGTGGGACGTATAACTTCCAGCTTAACGGTGCTGATAACCAGACTCGTGAAGACTATGGCGATCCTTGGAAACCTCGTCCTAAGCTTGGTTCAGGACAGTCCTATGGTTACAATGGAGCCAACCAGGATTATGTAACTCTTCGTTCTCTTAATTTTGATGGCTTTACTTCTCGTGGTATTTATATCCAGGTCGTAACCAATACAATTATCGAAGATTGCCTAATTTCCAATAGTGGATCCAGCAACCTTCAGGGAACCAAGCTTCACAATTCTGATAAAGCTGCTGCTCTTACTGTACCGGATCTTCCCGGTCGGTTGTTTAATCTGATCTATCGTAATAACGAAGTGAAGAACGTCAAAGGCGACGGTCTCTATATTACGAAGATCAATGGTATTCTTATCGAGAATAACAAGCACGATGCTGCTTATGGCGGCGGTGCTGACTGCATCCAGATCGCTTATGAGAACAGTTCCACGAACGTCAGTAGAGACGTTATGATTCGTGGTAACCTACTCTTGCAGCAACCACTGTCCCAGTCTGACAAGGGCGGTCTAGTCTGCGAACAGACCCTTCGATATGTTGCAGAATACAATGACATTGGTGGTAAGAACTTCTCGTTCTCCTCCATTGGATTTGATGCTGTCTGCCGATCCAACAACATGAGAGACGGCAAGCTCAATACCTATTCCTTCGGGTATGGTACTGGTGAGCAGTCTCACTTTGGTAGGCACCATGTTTACGATAACTTCATCACCAACTGTATTCGTGGTGTTGGTCTCTCCAGCTTTGGTGATTCCACCATCCTGAACAACGGTGTATATGGTTATCAACGTTATGACATGGAGTTCCATGATAACGTCATCTCCAAGTGCACCTATGGGTTCTTTGCTGACCGTCCATGGTCTGGTTACTTCAAGCGTAACATCCTGATGCAGTGCACCAACGGTATCACTCGTCAAGGCGGTACTGTCAGTGGTAACACTGTTGCCAATATGGGTGTGTACACGACCCAGGATGTAACCGGTAACTATACCAACGATGGTACTTGGCTCAATTCTGCTGCCCCAGTTCTCACTGGCAGTATCATTGCAGGCGGTACTGTCTCGGTAGCTGGTGCTGTCTGGAAGCTTAACGGTGTCGTCACTGTACCGGATGAAGTCTTCTACGTATGGCGTAACAAGGGTTACGACATTGCAGGTGCTGCTGGTGACTCGTACACCATCCCTGTAGATGCTGCTTCCGATTTCGAACTGTCTTGCGTCATGTTTGCCCGTAAGGGAACCAACTGGATGCTTGCTGTTGCTGAAAACGATTGGCCTACAAGTGCCTACTTCATCCCAAGAGCATATACTGAAGGTGCTCTGGGTTGGAGGAAGCGTTACTTCAAGCTGGGCGATGTAGCATAG

Tertiary structure

PDB ID
348cfc971c6fe256bc8e37f82d76aa9afe2a01e8a5f09d3869ca85ed447a13a9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2443
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank