Protein

View in Explore
Genbank accession
URY10781.1 [GenBank]
Protein name
host specificity protein J
RBP type
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MAENMITGSKGGSSKPYVPKEMEDNLISINKIKILLAVSDGECDPDFTLRDLYLDDVPVIADDGTVNYQGVSAEFRPGTQTQDYIQGFTDTSSEVTLARDITTSNPYVISVTNKTLSAIRIKMLMPTGIKQEDNGDLVGVKVTYAVDMAVDGDSYKEVLRDTIEGKTRSGYDRSRRIDLPAFNDRVLLRVRRVTADSASSRVTDLIKLQSYAEVIDAKFRYPLTGLVYVEFDSELFPNQIPNISIKKKWKLINVPSNYDPVMREYHGSWNGTFKKAWSNNPAWVLYDIITNQRYGLDQRELGVQVDKWSLYEAAQYCDQKVPDGKGGTEPRYLCDVVIQSQIEAYQLIRDICSIFRGMSFWNGESLSIVIDKPRDPSYIFTNDNVVDGDFQYTTASEKSMYTQCNVTFDDEQNMYQQDVEGVFDTEAALRFGYNPTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPSIGDVIAIADNFHSSNLKLNLSGRVMEVSGLQVFVPFKIDARPGDFIIINKPDGKPVKRTISKVSGDGKTIELNIGFGFEVKPDTVFAIDRTDIALQQYVVTSIGKGDGDDEFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVQPDKMAAPENVQISSYSRIVQGASVETMVVSWDKVPYASLYEMQWRKGDGNWLNTPQTANKEIEVEGIYSGNYQVRVRSVSASGSTSPWSRIVTASLTGKVGEPGAPVNLTASDNEVFGIRVKWGMPEGSGDTAYIELHQSPDGTAENSSLLTLIPYPQYEYWHGTLPAGHVVWYRIRSVDRIGNVSGWTNFVRGMASDDVEAVLGDILDKIFDTEAGKDLKENAIDSANKIKDQAQSIIQNALANDADVRIMMKENGKRKAEFRQSIQLIADETEARVTAMTQLKAEFDEEITSEVTRLDQAIATESETRATAIEELKSQIDDDIQGQLTRVEEAIASETEARVSADTALTAKFGDVESALTEKLDSWAGVNGVGAQYAMKLGLTYNGQKYSAGMVMQLSQGSSGLISQILFDANRFAIMTSSTGGSYTLPFVVENNQVFINSLLVKDGSITNAKIGNVIQSNNFVSGVQGWMINKSGAAELNNVTVRGSLYASNGSFAFNGTNNTVVINNNGITVNLPNGGRVVVGVW
Physico‐chemical
properties
protein length:1151 AA
molecular weight: 127058,90520 Da
isoelectric point:4,78206
aromaticity:0,08601
hydropathy:-0,32268

Domains

Domains [InterPro]
IPR053171
3–874
IPR053171 IPR015406
IPR055385
92–217
IPR055385 IPR032876 IPR036116 IPR013783
IPR013783
627–719
IPR013783
IPR003961
628–722
IPR003961
IPR003961
628–716
IPR003961
URY10781.1
1 1151
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage ESh4
[NCBI] 		2950783 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URY10781.1 [NCBI]
Genbank nucleotide accession
ON528718 [NCBI]
CDS location
range 16982 -> 20437
strand -
CDS
ATGGCTGAAAATATGATAACGGGAAGTAAGGGAGGATCATCAAAACCTTATGTTCCGAAAGAGATGGAAGATAACCTGATCTCAATCAACAAAATCAAAATCCTTCTTGCCGTTTCCGATGGCGAGTGCGATCCAGATTTTACACTTCGCGATCTGTATCTTGATGATGTTCCGGTAATTGCAGACGACGGAACTGTTAACTACCAAGGTGTGAGCGCAGAGTTTCGCCCAGGTACACAGACTCAAGATTACATCCAGGGATTTACTGACACATCAAGCGAAGTGACGCTGGCGCGTGATATTACCACGTCAAATCCTTATGTGATTTCCGTAACCAACAAAACATTATCTGCTATCAGAATCAAAATGCTAATGCCAACAGGCATTAAGCAAGAGGATAACGGCGATCTTGTCGGCGTTAAGGTTACTTATGCTGTTGATATGGCTGTTGACGGAGACTCTTACAAAGAAGTATTGCGAGACACTATCGAAGGTAAAACGCGTTCCGGTTACGACAGAAGCCGAAGGATTGACCTTCCGGCATTTAATGATCGCGTATTGCTTAGGGTTAGAAGGGTAACGGCAGACAGCGCATCTTCTCGCGTTACTGATCTGATTAAGCTACAAAGTTACGCTGAGGTTATTGATGCAAAATTCCGTTACCCTCTGACTGGCCTTGTATACGTTGAATTTGACAGCGAGTTGTTCCCTAACCAGATCCCTAACATTTCAATCAAGAAGAAATGGAAGTTGATTAATGTTCCGAGCAATTACGATCCGGTAATGCGAGAGTATCACGGCTCATGGAATGGTACGTTCAAGAAAGCGTGGTCTAACAATCCGGCGTGGGTACTTTATGACATTATCACAAACCAGCGATACGGATTAGATCAGCGAGAGCTTGGTGTACAGGTTGATAAGTGGAGTCTTTACGAAGCTGCGCAATACTGCGATCAGAAAGTTCCAGACGGAAAAGGAGGCACAGAGCCACGCTATCTATGTGATGTTGTTATCCAGAGTCAGATTGAGGCTTATCAGCTTATTCGTGATATTTGCTCAATATTCAGAGGCATGAGCTTTTGGAATGGGGAGAGCTTGTCAATCGTCATTGATAAGCCGCGCGATCCGTCGTACATCTTCACAAATGACAATGTTGTTGATGGTGATTTCCAGTACACAACAGCAAGTGAAAAGAGCATGTACACGCAGTGCAATGTGACGTTCGACGACGAACAAAACATGTATCAGCAGGACGTAGAAGGCGTGTTTGATACTGAGGCGGCACTACGCTTTGGATACAATCCGACAAGCATAACAGCGATCGGATGTACACGCAGGAGTGAGGCTAATCGGCGAGGTCGATGGATACTAAAAACCAACTTGCGCAGCACTACGGTAAACTTTGCTACTGGACTGGAAGGCATGATCCCATCAATAGGTGATGTGATTGCTATTGCTGACAACTTTCACAGCAGCAACCTGAAGTTAAACCTATCAGGGCGCGTGATGGAAGTTTCCGGCTTGCAGGTGTTCGTTCCGTTTAAGATTGATGCTAGACCAGGTGATTTCATTATCATCAACAAGCCGGACGGAAAGCCAGTTAAGCGCACAATCTCAAAAGTAAGCGGTGACGGAAAAACCATTGAGCTAAATATTGGGTTTGGATTTGAAGTTAAACCTGACACGGTTTTTGCAATCGACCGCACTGATATTGCATTGCAGCAATACGTTGTAACGAGTATCGGCAAAGGTGATGGTGATGATGAATTTACATACTCCATCACGGCTGTTGAATATGACCCTAACAAATACGACGAGATTGATTACGGAGTAAACATTGACGACAGGCCAACGTCAATTGTCCAGCCTGACAAAATGGCAGCACCGGAAAACGTGCAAATATCCTCATACTCGCGAATTGTCCAGGGTGCAAGCGTTGAAACAATGGTTGTGTCGTGGGATAAAGTACCTTACGCATCGCTGTATGAAATGCAGTGGCGAAAAGGTGATGGCAACTGGCTGAATACACCACAGACTGCAAACAAAGAAATTGAGGTTGAAGGTATTTATTCAGGAAACTACCAAGTAAGGGTCAGATCTGTTTCCGCTTCAGGTTCTACTTCTCCGTGGTCCAGAATTGTGACAGCTTCACTGACTGGTAAGGTGGGAGAGCCAGGCGCGCCAGTTAACTTAACAGCATCCGACAATGAGGTGTTTGGCATTCGTGTTAAGTGGGGTATGCCAGAAGGGAGCGGAGACACGGCATACATTGAGCTTCACCAGTCGCCGGATGGAACGGCTGAAAACTCAAGCCTGCTAACGCTGATCCCGTATCCACAATATGAATACTGGCACGGTACGCTTCCGGCTGGTCATGTTGTCTGGTATAGGATCCGCAGCGTTGACAGAATCGGCAACGTCTCCGGCTGGACTAATTTTGTTAGAGGTATGGCTTCAGATGATGTGGAGGCTGTTTTAGGAGATATTCTTGATAAGATTTTTGACACTGAAGCAGGAAAGGATCTGAAAGAGAATGCCATTGATAGCGCAAACAAAATCAAGGATCAGGCACAAAGCATCATTCAAAACGCATTGGCGAATGATGCAGACGTTAGGATTATGATGAAGGAAAACGGAAAACGCAAAGCCGAATTCAGGCAATCAATACAGTTGATCGCAGATGAAACTGAGGCGCGCGTTACCGCAATGACGCAACTCAAGGCTGAATTTGACGAGGAAATAACTAGCGAAGTAACAAGGCTTGATCAGGCAATTGCAACAGAATCGGAAACGCGAGCAACAGCCATTGAGGAATTGAAATCACAGATTGATGATGATATTCAGGGGCAATTAACGCGGGTTGAGGAGGCGATTGCAAGCGAAACAGAGGCGCGCGTTTCGGCTGATACAGCATTAACAGCGAAGTTTGGAGATGTTGAATCGGCACTTACTGAAAAACTTGATTCATGGGCTGGCGTTAATGGAGTTGGCGCACAGTACGCAATGAAATTGGGATTGACATATAACGGTCAGAAGTACAGCGCTGGTATGGTGATGCAGCTTTCACAGGGTTCATCCGGCCTTATTTCGCAGATTTTGTTTGATGCGAACAGGTTCGCTATCATGACAAGTTCTACTGGAGGATCGTATACGTTGCCTTTTGTGGTGGAAAATAACCAGGTATTCATTAACAGCCTGTTGGTGAAAGACGGTTCAATCACAAATGCTAAGATCGGTAACGTTATTCAATCAAACAACTTCGTATCTGGAGTGCAGGGGTGGATGATTAACAAATCAGGAGCAGCCGAGTTGAACAATGTTACTGTTAGAGGATCGCTTTATGCTTCAAACGGTAGTTTTGCTTTTAATGGAACAAATAACACCGTTGTTATAAATAACAATGGCATCACTGTAAACCTTCCCAATGGTGGACGAGTTGTTGTTGGTGTGTGGTAA

Tertiary structure

PDB ID
b2f92830bed068f4847d8a1f1ab14695c90f12507371ed201a196dbb60758643
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7798
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Design of a bacteriophage cocktail active against Shigella species and testing of its therapeutic potential in Galleria mellonella Filippov,A.A., Su,W., Kevorkian,R.T., Sergueev,K.V., Srijan,A., He,Y., Lurchachaiwong,W., McGann,P.T., Ellison,D.W., Swierczewski,B.E. and Nikolich,M.P. — — GenBank